prot_P-wetherbeei_contig52441.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52441.1.1
Unique Nameprot_P-wetherbeei_contig52441.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length153
Homology
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: A0A1Z9UK85_9GAMM (ABC transporter substrate-binding protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UK85_9GAMM)

HSP 1 Score: 279 bits (713), Expect = 3.990e-92
Identity = 139/153 (90.85%), Postives = 142/153 (92.81%), Query Frame = 0
Query:    1 MAQALSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            MA  LSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHL+D D+LASNHRGHGHCIAKGVEV GMMAEIYGK+TGTC GKGGSMHIADLDTGMMGANGIVGGGPPL CGA LAAK KG  GIAV FCGDGASNQG
Sbjct:    1 MATTLSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLKDSDKLASNHRGHGHCIAKGVEVNGMMAEIYGKKTGTCHGKGGSMHIADLDTGMMGANGIVGGGPPLACGAALAAKMKGTDGIAVVFCGDGASNQG 153          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: A0A3D5DBE5_9GAMM (ABC transporter substrate-binding protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBE5_9GAMM)

HSP 1 Score: 259 bits (662), Expect = 2.180e-84
Identity = 129/153 (84.31%), Postives = 141/153 (92.16%), Query Frame = 0
Query:    1 MAQALSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            MA  LS+EDLLDAYRTM+TIREFE+RVHVEFAKGGIPGFVHLYAGEEASATGV M+L++DD +ASNHRGHGHCIAKGVEV GMM+EIYG+ +GTC GKGGSMHIADLD GMMGANGIVGGGPPLVCGAGL AK +GKG IA+AF GDGASNQG
Sbjct:    1 MATNLSIEDLLDAYRTMRTIREFEERVHVEFAKGGIPGFVHLYAGEEASATGVCMNLKEDDYIASNHRGHGHCIAKGVEVTGMMSEIYGRGSGTCHGKGGSMHIADLDVGMMGANGIVGGGPPLVCGAGLTAKLRGKGNIALAFFGDGASNQG 153          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: A0A382NY07_9ZZZZ (E1_dh domain-containing protein (Fragment) n=5 Tax=root TaxID=1 RepID=A0A382NY07_9ZZZZ)

HSP 1 Score: 243 bits (621), Expect = 1.750e-78
Identity = 122/149 (81.88%), Postives = 128/149 (85.91%), Query Frame = 0
Query:    5 LSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            L+ E LL AY TMKTIREFE+RVH+EFA G IPGFVHLYAGEEAS TGV MHL D D +AS HRGHGHCIAKGVEVKGMMAEIYGK TGTC GKGGSMHIADLD GMMGANGIVGGGPPL+CGAGLA K  G GG+AVAF GDG SNQG
Sbjct:    4 LNSERLLQAYETMKTIREFEERVHIEFATGDIPGFVHLYAGEEASGTGVCMHLNDRDSIASTHRGHGHCIAKGVEVKGMMAEIYGKETGTCRGKGGSMHIADLDKGMMGANGIVGGGPPLICGAGLAKKTLGTGGVAVAFVGDGGSNQG 152          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: A1AMT0_PELPD (Pyruvate dehydrogenase (Acetyl-transferring) n=3 Tax=Desulfuromonadales TaxID=69541 RepID=A1AMT0_PELPD)

HSP 1 Score: 243 bits (621), Expect = 3.550e-78
Identity = 119/153 (77.78%), Postives = 132/153 (86.27%), Query Frame = 0
Query:    1 MAQALSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            M   L  EDLL AYRTM+ IREFEDR+H+EFA G IPGFVHLY+GEEA ATGV MHL D+DR++S HRGHGHCIAKGV++ GMMAEIYGK+TGTCGGKGGSMHIADL+ GMMGANGIVG GPPL+CGA LAAK KG GG+ VAF GDGASNQG
Sbjct:    1 MTSQLKKEDLLRAYRTMREIREFEDRLHIEFATGKIPGFVHLYSGEEAVATGVCMHLTDEDRISSTHRGHGHCIAKGVDIHGMMAEIYGKKTGTCGGKGGSMHIADLEKGMMGANGIVGAGPPLICGAALAAKFKGNGGVGVAFFGDGASNQG 153          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: A0A381TDX5_9ZZZZ (E1_dh domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A381TDX5_9ZZZZ)

HSP 1 Score: 240 bits (613), Expect = 5.610e-77
Identity = 120/149 (80.54%), Postives = 131/149 (87.92%), Query Frame = 0
Query:    5 LSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            L+ + LL AY TMKTIREFE+RVHVEFA G +PGFVHLYAGEEASATGV MHL+D D +AS HRGHGHCIAKGV+VKGMMAE+YG+ TGTC GKGGSMHIADLD GMMGANGIVGGGPPLVCGA L+AK  G GG+AVAF GDGASNQG
Sbjct:    3 LNQDQLLQAYETMKTIREFEERVHVEFATGDMPGFVHLYAGEEASATGVCMHLQDRDYIASTHRGHGHCIAKGVDVKGMMAELYGRTTGTCFGKGGSMHIADLDKGMMGANGIVGGGPPLVCGAALSAKTLGTGGVAVAFLGDGASNQG 151          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: A0A4R2L4I0_9GAMM (Pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Plasticicumulans lactativorans TaxID=1133106 RepID=A0A4R2L4I0_9GAMM)

HSP 1 Score: 240 bits (612), Expect = 8.450e-77
Identity = 119/153 (77.78%), Postives = 132/153 (86.27%), Query Frame = 0
Query:    1 MAQALSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            M+  L+ +DLL AYRTM+TIREFE+R+HVEFA G IPGFVHLYAGEEASATGV +HLR DDR+AS HRGHGHCIAKG+EV  MMAEIYGK+TG CGGKGGSMH+ADLD GMMGANGIVGGG PL+CGA LAAK KG  G+ V F GDGASNQG
Sbjct:    1 MSATLTRDDLLRAYRTMRTIREFEERLHVEFATGEIPGFVHLYAGEEASATGVCLHLRPDDRIASTHRGHGHCIAKGMEVAPMMAEIYGKKTGICGGKGGSMHVADLDVGMMGANGIVGGGGPLICGAALAAKMKGTDGVGVCFFGDGASNQG 153          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: A0A2E6ZHJ3_9GAMM (ABC transporter substrate-binding protein n=1 Tax=Woeseia sp. TaxID=1980636 RepID=A0A2E6ZHJ3_9GAMM)

HSP 1 Score: 238 bits (606), Expect = 7.050e-76
Identity = 118/149 (79.19%), Postives = 129/149 (86.58%), Query Frame = 0
Query:    5 LSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            L  E LL AYRTMKTIREFE+R+HVEFAKGGIPGFVHLYAGEEASA G+ MHL D DR+AS HRGHGHCIAKGV+VKGMMAEIYGK TG C GKGGSMHIADL  GMMGANGI+G G PLVCGAGLAA++ G  G+A++F GDGASNQG
Sbjct:    7 LDKEKLLLAYRTMKTIREFEERLHVEFAKGGIPGFVHLYAGEEASAVGIMMHLHDKDRIASTHRGHGHCIAKGVDVKGMMAEIYGKATGVCAGKGGSMHIADLSKGMMGANGILGAGAPLVCGAGLAAQKLGHDGVAISFVGDGASNQG 155          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: UPI001D0A2003 (thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha n=1 Tax=Acidisoma cellulosilyticum TaxID=2802395 RepID=UPI001D0A2003)

HSP 1 Score: 236 bits (602), Expect = 2.440e-75
Identity = 116/146 (79.45%), Postives = 129/146 (88.36%), Query Frame = 0
Query:    8 EDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            EDLL AYRTM+TIR+FE+R+HVEFA G IPGFVHLYAGEEASATGV  HLRDDD +AS HRGHGHCIAKGVEV+GMM EIYG+R G CGGKGGSMHIADL  GM+GANGIVGGGPPL+CGA L+AK +  GG+A+AF GDGASNQG
Sbjct:    6 EDLLRAYRTMRTIRDFEERLHVEFATGEIPGFVHLYAGEEASATGVCTHLRDDDFIASTHRGHGHCIAKGVEVQGMMHEIYGRRDGVCGGKGGSMHIADLSKGMLGANGIVGGGPPLICGAALSAKIRKTGGVAIAFLGDGASNQG 151          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: A0A6N7I001_9PSEU (ABC transporter substrate-binding protein n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A6N7I001_9PSEU)

HSP 1 Score: 235 bits (600), Expect = 6.630e-75
Identity = 118/149 (79.19%), Postives = 128/149 (85.91%), Query Frame = 0
Query:    5 LSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            LS E LLDAYRTM+TIR FE+RVH EFA G IPGFVHLYAGEEASATGV  HL D D +AS HRGHGHCIAKGV+VK MMAEIYGKRTG+C GKGGSMHIADL  GM+GANGIVGGGPPL+CG  LAAK++G GG+ VAF GDGASNQG
Sbjct:   13 LSAESLLDAYRTMRTIRMFEERVHDEFATGEIPGFVHLYAGEEASATGVCSHLDDRDAIASTHRGHGHCIAKGVDVKAMMAEIYGKRTGSCQGKGGSMHIADLSKGMLGANGIVGGGPPLICGTALAAKQQGTGGVGVAFFGDGASNQG 161          
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Match: UPI001E371D09 (thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha n=1 Tax=Geomonas sp. RF6 TaxID=2897342 RepID=UPI001E371D09)

HSP 1 Score: 235 bits (599), Expect = 7.610e-75
Identity = 116/153 (75.82%), Postives = 129/153 (84.31%), Query Frame = 0
Query:    1 MAQALSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASATGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGGSMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGASNQG 153
            M   L  E+LL AYRTMK IREFE+R+HVEFA G IPGFVHLY+GEEA AT V MHL D+DR++S HRGHGHCIAKGVE+ GMMAEIYGK+TGTCGGKGGSMHIADL+ GMMGANGIVG GPPL+CGAGLAAK K    + +AF GDGASNQG
Sbjct:    1 MLTKLKKEELLKAYRTMKEIREFEERLHVEFATGKIPGFVHLYSGEEAVATAVCMHLNDEDRISSTHRGHGHCIAKGVEIPGMMAEIYGKKTGTCGGKGGSMHIADLEKGMMGANGIVGAGPPLICGAGLAAKFKNNKAVGIAFFGDGASNQG 153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52441.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z9UK85_9GAMM3.990e-9290.85ABC transporter substrate-binding protein n=2 Tax=... [more]
A0A3D5DBE5_9GAMM2.180e-8484.31ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A382NY07_9ZZZZ1.750e-7881.88E1_dh domain-containing protein (Fragment) n=5 Tax... [more]
A1AMT0_PELPD3.550e-7877.78Pyruvate dehydrogenase (Acetyl-transferring) n=3 T... [more]
A0A381TDX5_9ZZZZ5.610e-7780.54E1_dh domain-containing protein n=2 Tax=root TaxID... [more]
A0A4R2L4I0_9GAMM8.450e-7777.78Pyruvate dehydrogenase E1 component alpha subunit ... [more]
A0A2E6ZHJ3_9GAMM7.050e-7679.19ABC transporter substrate-binding protein n=1 Tax=... [more]
UPI001D0A20032.440e-7579.45thiamine pyrophosphate-dependent dehydrogenase E1 ... [more]
A0A6N7I001_9PSEU6.630e-7579.19ABC transporter substrate-binding protein n=1 Tax=... [more]
UPI001E371D097.610e-7575.82thiamine pyrophosphate-dependent dehydrogenase E1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001017Dehydrogenase, E1 componentPFAMPF00676E1_dhcoord: 16..153
e-value: 7.2E-35
score: 120.4
NoneNo IPR availableGENE3D3.40.50.970coord: 1..153
e-value: 8.9E-52
score: 178.2
NoneNo IPR availablePANTHERPTHR11516PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLARcoord: 5..153
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 5..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52441contigP-wetherbeei_contig52441:88..546 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52441.1.1mRNA_P-wetherbeei_contig52441.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52441 88..546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52441.1.1 ID=prot_P-wetherbeei_contig52441.1.1|Name=mRNA_P-wetherbeei_contig52441.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp
MAQALSVEDLLDAYRTMKTIREFEDRVHVEFAKGGIPGFVHLYAGEEASA
TGVGMHLRDDDRLASNHRGHGHCIAKGVEVKGMMAEIYGKRTGTCGGKGG
SMHIADLDTGMMGANGIVGGGPPLVCGAGLAAKRKGKGGIAVAFCGDGAS
NQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001017DH_E1
IPR029061THDP-binding