prot_P-wetherbeei_contig52268.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52268.1.1
Unique Nameprot_P-wetherbeei_contig52268.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length144
Homology
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A3D4BA03_9BACT (Epimerase domain-containing protein (Fragment) n=2 Tax=FCB group TaxID=1783270 RepID=A0A3D4BA03_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 7.970e-19
Identity = 60/150 (40.00%), Postives = 76/150 (50.67%), Query Frame = 0
Query:    1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHY------ADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 144
            VL+TGA GF+GR+LCRALV+ GA V+AL RT     SS     SH        D+   D LK  I       ++HLAA    D   +   +  A N  GT NLL  L +      +   +AE YG    PFRE    +P SAY +SKA+A
Sbjct:   15 VLITGANGFIGRHLCRALVDEGARVYALRRTNAF--SSPSEWASHLDIEWIEVDLCDSDRLKSVIKDTAASHIFHLAAVTTVDRGFELAQRMIANNLQGTINLLHALEATSYTCFIHTGSAEEYGMATAPFRETAFPQPVSAYSASKASA 162          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A3B9TCM3_9BACT (Epimerase domain-containing protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A3B9TCM3_9BACT)

HSP 1 Score: 84.3 bits (207), Expect = 9.310e-17
Identity = 49/144 (34.03%), Postives = 73/144 (50.69%), Query Frame = 0
Query:    1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 144
            ++VTG +G+LG +L +AL   GA+V+ +     +     P       D+T+ +EL   I  ++P IVYHLAAS+NR+           VN  GT +LL+ L        +  ST+E+YG    PF E+    P S Y  +K  A
Sbjct:   10 IVVTGGQGYLGSFLVKALQEKGADVYIISIEAEKSDRHFP------IDITKFEELNAVIQQIQPDIVYHLAASLNRNRDFSIFENMLKVNVTGTFHLLKSLEQTQCQQFIFTSTSEIYGNNASPFHEELLPMPVSPYSLTKVMA 147          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A1M5J7Y5_9FLAO (UDP-glucose 4-epimerase n=1 Tax=Muricauda flava TaxID=570519 RepID=A0A1M5J7Y5_9FLAO)

HSP 1 Score: 83.2 bits (204), Expect = 2.660e-16
Identity = 56/147 (38.10%), Postives = 74/147 (50.34%), Query Frame = 0
Query:    1 VLVTGARGFLGRYLCRALVNAGA-EVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQE--FPPFREDCKGRPESAYPSSKATA 144
            VLVTG  G+LGR L   L+  G  EVH++     +  S  P    H A++     L + I  ++P ++YHLAA++NR      V Q   VN  GT NLL  L     D  +  ST+EVYG +   PPF+E     P S Y  SK  A
Sbjct:   12 VLVTGGAGYLGRNLISELIRLGCKEVHSIDLQNTQENS--PNITFHQANLLDASSLSDLIEKIKPTLIYHLAANLNRSRDFSNVKQLMDVNFTGTVNLLTALEDISYDNFVYTSTSEVYGGKSMIPPFKETDDFTPASPYSMSKYCA 156          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A8G0CN58_9HYPH (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Devosia salina TaxID=2860336 RepID=A0A8G0CN58_9HYPH)

HSP 1 Score: 80.5 bits (197), Expect = 3.500e-15
Identity = 56/154 (36.36%), Postives = 76/154 (49.35%), Query Frame = 0
Query:    1 VLVTGARGFLGRYLCRALVNAGAEV-----------HALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYG--QEFPPFREDCKGRPESAYPSSK 141
            VLVTGA GF+G +LCRAL+ AG  V            AL +T+ +L   + G      D+T P  L   + + +   V+HLAA      S +A       N VGT NLL+ L  HPP+ ++ AST+ VYG     P    D    P S Y ++K
Sbjct:    3 VLVTGAAGFIGFHLCRALLAAGHSVVGLDALTNYYDPALKQTRLDLLMPMRGFSFGRVDLTDPAALGAFVAAAQAETVFHLAAQPGVRYSIEAPQSYIQSNVVGTANLLEALRQHPPEHLIFASTSSVYGGNSRLPYAETDRADSPLSLYAATK 156          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A1F7HGV2_9BACT (Epimerase domain-containing protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPHIGHO2_12_FULL_33_9 TaxID=1802045 RepID=A0A1F7HGV2_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 3.640e-15
Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = 0
Query:    1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHY-ADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 144
            +LVTGA GFLG+ L +AL    A+++A    + +        +  Y AD   P+++++ I  ++P I+YH+   VN             +N +GT N+L+ L  +PP   +  ST EVYG    P++E  +  P S Y  SKA A
Sbjct:    5 ILVTGATGFLGKNLVKALRREKADIYATSMHEDK-------NLKVYGADFLFPEKVRKTIDKVKPAIIYHIGGLVNLARDYGVYKNCLEINTIGTLNILEALRPNPPKKFIFISTEEVYGGNKIPYKETQEIDPPSGYSISKAAA 142          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A2R3PWM9_STEMA (GDP-mannose 4,6 dehydratase n=2 Tax=Stenotrophomonas maltophilia TaxID=40324 RepID=A0A2R3PWM9_STEMA)

HSP 1 Score: 79.7 bits (195), Expect = 4.900e-15
Identity = 54/143 (37.76%), Postives = 76/143 (53.15%), Query Frame = 0
Query:    1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHP--PDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSK 141
            VL+TGA GF GRYL + L +AG ++  L       GS  P   +   D+     L+EA+  L+P +V HLAA     ++   V + + VN VGT NLL+ LA  P  P  +L+AS+A VYG       E+    P++ Y  SK
Sbjct:   12 VLITGASGFTGRYLVQELTDAGCKILTL-------GSHAPSGAATSVDLLDRKSLREALQDLQPELVVHLAAI--SFVAHGDVDEIYRVNVVGTRNLLEALADLPEVPSHVLLASSANVYGNVGGVLAEESPLSPQNDYAVSK 145          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A7V5RA33_9DELT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V5RA33_9DELT)

HSP 1 Score: 77.0 bits (188), Expect = 6.200e-14
Identity = 60/159 (37.74%), Postives = 78/159 (49.06%), Query Frame = 0
Query:    1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHY----ADVTRPDELKEAIGSLRPRIVYHLAA---------SVNRDIS--RQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 144
            VLVTGA GF+G +L RA + AGAE  AL R    L S L G +       AD+     L E + SLRP++++HLAA         S++R ++  R A++   AV A GT  L+               T E YG    PF ED    P S Y +SKA A
Sbjct:   16 VLVTGATGFIGSHLVRAALEAGAETAALARPGSSL-SRLSGVLDRVELVRADLLDRRTLTETVRSLRPQVIFHLAAVTDVSRGLASLDRSLADLRAAMNVVCAVEAAGTERLVH------------TGTCEEYGDNEAPFTEDQPPNPVSPYSASKAAA 161          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: UPI001FA98712 (GDP-mannose 4,6-dehydratase n=1 Tax=Pantoea sp. MQR6 TaxID=2907307 RepID=UPI001FA98712)

HSP 1 Score: 76.6 bits (187), Expect = 6.650e-14
Identity = 54/145 (37.24%), Postives = 77/145 (53.10%), Query Frame = 0
Query:    2 LVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHY--ADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHP--PDVMLMASTAEVYGQEFP-PFREDCKGRPESAYPSSK 141
            L+TG +GF GRY+   L  AG EV+ L       GS+    + +Y  AD+T+  E+K AI  + P +V HLAA     +    V+  + VN  GT NLLQ+L+     P+ +L+AS+A VYG   P    E+    P + Y  SK
Sbjct:    8 LITGIKGFTGRYMAAELSAAGYEVYGL-------GSTPANDLKNYYVADLTKISEVKAAIDLISPDVVIHLAAIAF--VGHDDVNAFYNVNICGTRNLLQVLSELEKLPEAVLLASSANVYGNTTPGKLSEESNVNPANDYAVSK 143          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: A0A7V5BDA6_9BACT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7V5BDA6_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 9.130e-14
Identity = 48/144 (33.33%), Postives = 73/144 (50.69%), Query Frame = 0
Query:    1 VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA 144
            +LVTG  G+LGR+L   L NA A+V+ + +       +         D+T  D ++ AI  ++P I++HLAAS+NR+ +     ++  +N  GT NLL  L +      +  ST+EVYG    PF E       S Y  +K  A
Sbjct:   11 ILVTGGNGYLGRHLVERLRNAQADVYIMDKFGDASAKAF------ILDITDLDVVRTAIAKIQPDIIFHLAASLNRERNFDRFEETNNINLNGTKNLLFALQNTNYQHFIFTSTSEVYGSNMAPFVETQLADAASPYSLTKVFA 148          
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Match: UPI001B39A93C (GDP-mannose 4,6-dehydratase n=1 Tax=Rhodanobacter sp. B2A1Ga4 TaxID=2778647 RepID=UPI001B39A93C)

HSP 1 Score: 76.3 bits (186), Expect = 9.310e-14
Identity = 52/143 (36.36%), Postives = 75/143 (52.45%), Query Frame = 0
Query:    2 LVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVTRPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQILAS--HPPDVMLMASTAEVYGQE-FPPFREDCKGRPESAYPSSK 141
            L+TG  GF G Y+ R L  AG EV  L   + +   S+       AD+   + L +A+ S++P +V HLAA     ++   V + + VN VGT NLL  LA+  H P ++++AS+A VYG     P  ED    P + Y  SK
Sbjct:    7 LLTGRSGFTGHYVARELEQAGYEVVGLSNGEHDESGSIQ------ADLLDREALHQAVASVKPDVVLHLAAIAF--VAHGDVDEMYRVNVVGTRNLLDALAAAEHKPGLVVLASSANVYGNAGVEPITEDTPPAPANDYAVSK 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52268.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D4BA03_9BACT7.970e-1940.00Epimerase domain-containing protein (Fragment) n=2... [more]
A0A3B9TCM3_9BACT9.310e-1734.03Epimerase domain-containing protein n=1 Tax=Bacter... [more]
A0A1M5J7Y5_9FLAO2.660e-1638.10UDP-glucose 4-epimerase n=1 Tax=Muricauda flava Ta... [more]
A0A8G0CN58_9HYPH3.500e-1536.36NAD-dependent epimerase/dehydratase family protein... [more]
A0A1F7HGV2_9BACT3.640e-1533.10Epimerase domain-containing protein n=1 Tax=Candid... [more]
A0A2R3PWM9_STEMA4.900e-1537.76GDP-mannose 4,6 dehydratase n=2 Tax=Stenotrophomon... [more]
A0A7V5RA33_9DELT6.200e-1437.74NAD-dependent epimerase/dehydratase family protein... [more]
UPI001FA987126.650e-1437.24GDP-mannose 4,6-dehydratase n=1 Tax=Pantoea sp. MQ... [more]
A0A7V5BDA6_9BACT9.130e-1433.33NAD-dependent epimerase/dehydratase family protein... [more]
UPI001B39A93C9.310e-1436.36GDP-mannose 4,6-dehydratase n=1 Tax=Rhodanobacter ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 1..143
e-value: 2.0E-25
score: 89.7
NoneNo IPR availableGENE3D3.40.50.720coord: 1..144
e-value: 1.5E-35
score: 124.5
NoneNo IPR availablePANTHERPTHR43000:SF27DTDP-GLUCOSE 4,6-DEHYDRATASE 2coord: 1..144
NoneNo IPR availablePANTHERPTHR43000DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATEDcoord: 1..144
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52268contigP-wetherbeei_contig52268:15..446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52268.1.1mRNA_P-wetherbeei_contig52268.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52268 15..446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52268.1.1 ID=prot_P-wetherbeei_contig52268.1.1|Name=mRNA_P-wetherbeei_contig52268.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
VLVTGARGFLGRYLCRALVNAGAEVHALHRTQPELGSSLPGTISHYADVT
RPDELKEAIGSLRPRIVYHLAASVNRDISRQAVHQSFAVNAVGTHNLLQI
LASHPPDVMLMASTAEVYGQEFPPFREDCKGRPESAYPSSKATA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf