prot_P-wetherbeei_contig5218.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5218.1.1
Unique Nameprot_P-wetherbeei_contig5218.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length133
Homology
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BLAST of mRNA_P-wetherbeei_contig5218.1.1 vs. uniprot
Match: A0A836CC35_9STRA (Formyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC35_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.370e-6
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 
Query:    1 MFGIPFKHLPIPAKTDGGKRVQELQIE 27
            MFGIPF+HLPIP K DGGKR QELQIE
Sbjct:   93 MFGIPFRHLPIPPKADGGKRAQELQIE 119
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BLAST of mRNA_P-wetherbeei_contig5218.1.1 vs. uniprot
Match: D8LH40_ECTSI (ACT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH40_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 2.070e-5
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0 
Query:    1 MFGIPFKHLPIPAKTDGGKRVQELQIEEV 29
            MFG+PF HLPIP K  GGKRVQE+QIEE+
Sbjct:  184 MFGVPFVHLPIPPKDQGGKRVQEIQIEEI 212
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5218.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CC35_9STRA8.370e-685.19Formyl transferase n=1 Tax=Tribonema minus TaxID=3... [more]
D8LH40_ECTSI2.070e-575.86ACT domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5218contigP-wetherbeei_contig5218:244..642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5218.1.1mRNA_P-wetherbeei_contig5218.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5218 145..646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5218.1.1 ID=prot_P-wetherbeei_contig5218.1.1|Name=mRNA_P-wetherbeei_contig5218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp
MFGIPFKHLPIPAKTDGGKRVQELQIEEVRTERPASFVFHRALDAVSAFR
HRRRLIPPPAAGALPPPVAWRRHQLAGLHTLPCRCRPPLPMLLVHRSLLL
LRRSFTIATARRWRWLVPSTALSPFLLRCRRA*
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