prot_P-wetherbeei_contig52150.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52150.1.1
Unique Nameprot_P-wetherbeei_contig52150.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length182
Homology
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: UPI001BA9FDEE (tripartite tricarboxylate transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. AUGA SZCCT0431 TaxID=2807674 RepID=UPI001BA9FDEE)

HSP 1 Score: 340 bits (872), Expect = 9.070e-116
Identity = 172/182 (94.51%), Postives = 173/182 (95.05%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SPALD KLRWDPVRDFV IGQICRAPNFFIVP TLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVT IGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPD PTMAEQGFAEAQVTPWFGIV  AATP P+VERISKALE ALATAEV
Sbjct:  101 SPALDAKLRWDPVRDFVAIGQICRAPNFFIVPTTLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTGIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDVPTMAEQGFAEAQVTPWFGIVVPAATPLPVVERISKALEAALATAEV 282          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: A0A1E3EIY4_BRAEL (Tripartite-type tricarboxylate transporter receptor subunit TctC n=24 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A1E3EIY4_BRAEL)

HSP 1 Score: 324 bits (830), Expect = 2.130e-109
Identity = 161/182 (88.46%), Postives = 171/182 (93.96%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SPAL+ +LRWDPVRDFVP+GQIC APNFFIVP +LPVKTVA+YVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITS+FLSANQALAQVQSG+IRIIGAI+DGRSKYF D PTMAEQGFAEAQVTPWFG V  A TPQP+VERIS ALETALA+ EV
Sbjct:  100 SPALNTQLRWDPVRDFVPVGQICLAPNFFIVPTSLPVKTVADYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSSFLSANQALAQVQSGSIRIIGAISDGRSKYFADVPTMAEQGFAEAQVTPWFGFVVPAGTPQPVVERISAALETALASTEV 281          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: UPI001BAD1D49 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium tropiciagri TaxID=312253 RepID=UPI001BAD1D49)

HSP 1 Score: 322 bits (826), Expect = 8.620e-109
Identity = 159/182 (87.36%), Postives = 171/182 (93.96%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SPAL  +LRWDPV+DF+P+GQIC+APNFFIVP++LPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITS+FLSANQALAQVQSG IRIIGAI+DGRSKYFPD PTMAEQG+AEAQVTPWFG V  A TPQ +VERIS ALETALA+A V
Sbjct:  100 SPALSTQLRWDPVKDFIPVGQICQAPNFFIVPSSLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSSFLSANQALAQVQSGTIRIIGAISDGRSKYFPDVPTMAEQGYAEAQVTPWFGFVVPAGTPQAVVERISAALETALASAAV 281          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: A0A850HQ22_9BRAD (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. 2S1 TaxID=1404429 RepID=A0A850HQ22_9BRAD)

HSP 1 Score: 318 bits (815), Expect = 1.980e-108
Identity = 156/182 (85.71%), Postives = 170/182 (93.41%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SPAL  +LRWDPV+DF P+GQIC APNFFIVPA+LPVKTVA+YV LAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITS+FLSANQALAQVQSG+IRIIGAI+DGRSKYFPD PT+AEQG+AEAQVTPWFG V  +ATP+P+VERIS ALETAL +A V
Sbjct:   11 SPALSTQLRWDPVKDFAPVGQICLAPNFFIVPASLPVKTVADYVVLAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSSFLSANQALAQVQSGSIRIIGAISDGRSKYFPDVPTLAEQGYAEAQVTPWFGFVVPSATPRPVVERISAALETALTSAAV 192          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: A0A1M7KHU7_9BRAD (Tripartite-type tricarboxylate transporter, receptor component TctC n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M7KHU7_9BRAD)

HSP 1 Score: 319 bits (817), Expect = 2.150e-107
Identity = 157/182 (86.26%), Postives = 168/182 (92.31%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SP+L+  LRWDPVRDF+P+GQ+C APNFFIVP +LPVKTVAEYVALAK KPGTLNYSHPGKGSTGHLGFELFKRLA IDVT IGYRGYPQMVPDIASGLI+STFLSANQALAQVQSG+IRIIG INDGR+KYFPD PTMAEQGFAEAQVTPWFGIV   ATP+PIVERISKALE ALA A+V
Sbjct:  102 SPSLNATLRWDPVRDFIPVGQVCVAPNFFIVPTSLPVKTVAEYVALAKEKPGTLNYSHPGKGSTGHLGFELFKRLAAIDVTGIGYRGYPQMVPDIASGLISSTFLSANQALAQVQSGSIRIIGTINDGRTKYFPDVPTMAEQGFAEAQVTPWFGIVLPKATPEPIVERISKALEAALAAADV 283          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: A0A1H1NTE0_9BRAD (Tripartite-type tricarboxylate transporter, receptor component TctC n=1 Tax=Bradyrhizobium canariense TaxID=255045 RepID=A0A1H1NTE0_9BRAD)

HSP 1 Score: 318 bits (816), Expect = 3.050e-107
Identity = 157/182 (86.26%), Postives = 168/182 (92.31%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SP+L+  L WDPVRDF+PIGQICRAPNFF+VP TLPVK VAEYVALAKAKPG LNYSHPGKGSTGHLGFELFKRLAGIDVT IGYRGYPQMV DI+SGLITSTFLSANQALAQVQ+G IRIIGAINDGRSKYFPD PTMAEQG+AEAQVTPWFGIV  A TP PIV+RISKAL+TALA+A+V
Sbjct:  102 SPSLNVSLHWDPVRDFIPIGQICRAPNFFVVPTTLPVKNVAEYVALAKAKPGKLNYSHPGKGSTGHLGFELFKRLAGIDVTGIGYRGYPQMVADISSGLITSTFLSANQALAQVQTGTIRIIGAINDGRSKYFPDVPTMAEQGYAEAQVTPWFGIVVPAGTPGPIVDRISKALDTALASADV 283          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: A0A525K1N0_BRASZ (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525K1N0_BRASZ)

HSP 1 Score: 318 bits (815), Expect = 4.330e-107
Identity = 159/182 (87.36%), Postives = 167/182 (91.76%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SP+L  KLRWDPVRDF+PIGQICRAPNFFIVPA+LPVK VAEYVALAK KPG LNY HPGKGSTGHLGFELFKRLAGIDV  IGYRGYPQMV DIA+G +TSTFLSANQALAQVQ+GAIRIIGAINDGRSKYFPD PTMAEQG+AEAQVTPWFGIV  A TPQPIVERISKALE ALAT+EV
Sbjct:  102 SPSLFVKLRWDPVRDFIPIGQICRAPNFFIVPASLPVKNVAEYVALAKEKPGVLNYGHPGKGSTGHLGFELFKRLAGIDVPDIGYRGYPQMVSDIATGRLTSTFLSANQALAQVQTGAIRIIGAINDGRSKYFPDVPTMAEQGYAEAQVTPWFGIVVPAGTPQPIVERISKALEAALATSEV 283          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: UPI001BAA8FDD (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BAA8FDD)

HSP 1 Score: 313 bits (803), Expect = 2.520e-105
Identity = 151/182 (82.97%), Postives = 169/182 (92.86%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SPAL   LRWDPV+D+VP+GQICRAPNFFIVP++LPVK+V E+VALA++KPGTLNYSHPGKGSTGHLGFELFK+LAGIDVT IGYRGYPQMVPDIASGLITSTFLSANQA+AQVQ+GAIR+IGAI+DGRSKYFPD PT+AEQGFAEAQVTPWFG+V  A TPQP+V +IS ALE ALAT EV
Sbjct:   98 SPALAKDLRWDPVKDYVPVGQICRAPNFFIVPSSLPVKSVGEFVALARSKPGTLNYSHPGKGSTGHLGFELFKKLAGIDVTGIGYRGYPQMVPDIASGLITSTFLSANQAIAQVQTGAIRVIGAISDGRSKYFPDVPTLAEQGFAEAQVTPWFGVVVPAGTPQPVVAKISTALEAALATPEV 279          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: A0A525IH05_BRASZ (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525IH05_BRASZ)

HSP 1 Score: 309 bits (791), Expect = 1.910e-103
Identity = 151/182 (82.97%), Postives = 166/182 (91.21%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SP+L+  LRWDPVRDF+PIGQIC+APNFFIV  +LPVK VAEYVALA+AKPG LNYSHPGKGSTGHLGFELFKRLAGI+VT +GYRGYPQMV DIASGL+ STFLSANQA+AQ+Q+GAIRII  INDGRSKYFPD PTMAEQG+AEAQVTPWFGIV  A TPQPIV+RIS+ALE ALATAEV
Sbjct:  102 SPSLNITLRWDPVRDFIPIGQICQAPNFFIVSTSLPVKNVAEYVALARAKPGALNYSHPGKGSTGHLGFELFKRLAGIEVTPVGYRGYPQMVADIASGLVNSTFLSANQAMAQMQTGAIRIIATINDGRSKYFPDVPTMAEQGYAEAQVTPWFGIVVPAGTPQPIVDRISRALEAALATAEV 283          
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Match: A0A533J7G7_9BRAD (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533J7G7_9BRAD)

HSP 1 Score: 306 bits (784), Expect = 2.070e-102
Identity = 147/182 (80.77%), Postives = 166/182 (91.21%), Query Frame = 0
Query:    1 SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLITSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVTPWFGIVASAATPQPIVERISKALETALATAEV 182
            SP+L   LRWDPV+DF PIGQICRAPNFFIVP++LPVK+ +E+VALAK+KPGTLNYSHPGKGSTGHLGFELFKRLAGIDVT +GYRGYPQMVPDIASGLI STFLSAN  +AQ+Q+GAIRIIGAI+DGRSKYFPD PT+AEQGFAEAQVTPWFG+V  + TPQP+V +IS ALE ALATA+V
Sbjct:  100 SPSLAKDLRWDPVKDFAPIGQICRAPNFFIVPSSLPVKSASEFVALAKSKPGTLNYSHPGKGSTGHLGFELFKRLAGIDVTGVGYRGYPQMVPDIASGLINSTFLSANMTMAQLQTGAIRIIGAISDGRSKYFPDVPTLAEQGFAEAQVTPWFGVVVPSGTPQPLVAKISTALEAALATADV 281          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52150.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001BA9FDEE9.070e-11694.51tripartite tricarboxylate transporter substrate-bi... [more]
A0A1E3EIY4_BRAEL2.130e-10988.46Tripartite-type tricarboxylate transporter recepto... [more]
UPI001BAD1D498.620e-10987.36tripartite tricarboxylate transporter substrate bi... [more]
A0A850HQ22_9BRAD1.980e-10885.71Tripartite tricarboxylate transporter substrate bi... [more]
A0A1M7KHU7_9BRAD2.150e-10786.26Tripartite-type tricarboxylate transporter, recept... [more]
A0A1H1NTE0_9BRAD3.050e-10786.26Tripartite-type tricarboxylate transporter, recept... [more]
A0A525K1N0_BRASZ4.330e-10787.36Tripartite tricarboxylate transporter substrate bi... [more]
UPI001BAA8FDD2.520e-10582.97tripartite tricarboxylate transporter substrate bi... [more]
A0A525IH05_BRASZ1.910e-10382.97Tripartite tricarboxylate transporter substrate bi... [more]
A0A533J7G7_9BRAD2.070e-10280.77Tripartite tricarboxylate transporter substrate bi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.190.10coord: 26..149
e-value: 3.1E-55
score: 189.3
NoneNo IPR availablePANTHERPTHR42928:SF5BLR1237 PROTEINcoord: 2..182
NoneNo IPR availableCDDcd07012PBP2_Bug_TTTcoord: 2..182
e-value: 2.8437E-65
score: 200.003
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 15..178
IPR005064Bordetella uptake genePFAMPF03401TctCcoord: 4..181
e-value: 2.4E-43
score: 148.2
IPR005064Bordetella uptake genePANTHERPTHR42928TRICARBOXYLATE-BINDING PROTEINcoord: 2..182
IPR042100Bordetella uptake gene, domain 1GENE3D3.40.190.150Bordetella uptake gene, domain 1coord: 2..182
e-value: 3.1E-55
score: 189.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52150contigP-wetherbeei_contig52150:2..547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52150.1.1mRNA_P-wetherbeei_contig52150.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52150 2..547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52150.1.1 ID=prot_P-wetherbeei_contig52150.1.1|Name=mRNA_P-wetherbeei_contig52150.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp
SPALDPKLRWDPVRDFVPIGQICRAPNFFIVPATLPVKTVAEYVALAKAK
PGTLNYSHPGKGSTGHLGFELFKRLAGIDVTAIGYRGYPQMVPDIASGLI
TSTFLSANQALAQVQSGAIRIIGAINDGRSKYFPDAPTMAEQGFAEAQVT
PWFGIVASAATPQPIVERISKALETALATAEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005064BUG
IPR042100Bug_dom1