prot_P-wetherbeei_contig521.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig521.1.1
Unique Nameprot_P-wetherbeei_contig521.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length160
Homology
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A1I8ACE1_9BILA (RRM domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8ACE1_9BILA)

HSP 1 Score: 102 bits (255), Expect = 4.680e-24
Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    9 REERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYGGGSGG 112
            R ++P PT+PPYKA+VGNL FDC + D    +F+DC +V++H+ +DRE+   +GF YVEF   + L   LS+NG  F  R +++D+A+  ++   GG+ GG GG
Sbjct:   10 RAQKPLPTEPPYKAYVGNLPFDCVQGDFD-DIFRDCSIVNIHMCRDRESDQFKGFAYVEFATVEDLEKGLSVNGHMFENRPLRIDVADAPRKQDRGGFRGGRGG 112          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A4V6S1H0_9AGAM (RRM domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4V6S1H0_9AGAM)

HSP 1 Score: 105 bits (263), Expect = 1.060e-23
Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 0
Query:    3 ERYAPQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYGGGSGGRD 114
            +R  P RE+ P PTQPPY AF+GNL FD TE D+  S F D KV  V + KDR+   P+GFGYVEFED D+L+ ALS +G + + RT++V +AE  +   G  +GGG GG D
Sbjct:   55 DRLGPPREDLPLPTQPPYTAFIGNLAFDLTEMDLQ-SFFGDSKVKSVKVIKDRDER-PKGFGYVEFEDLDALKDALSRSGTSLMSRTIRVSVAEPPKERAG--FGGGFGGDD 162          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: UPI0016029FED (eukaryotic translation initiation factor 4H-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016029FED)

HSP 1 Score: 98.6 bits (244), Expect = 1.260e-23
Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 0
Query:   13 PFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYGG 108
            P PT+PPY A+VGNL +   EED+  ++F   KV  V+L +DRET   RGFG+VEFEDA+SL+ AL  +GA+F  R +KV++A ++   RG GY G
Sbjct:    8 PLPTEPPYNAYVGNLPYQIVEEDVR-NIFSGLKVKSVNLVQDRETGRSRGFGFVEFEDAESLKQALEFDGASFGDRNLKVNVARSRPDGRGRGYXG 102          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A4U5N692_STECR (RRM domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5N692_STECR)

HSP 1 Score: 100 bits (250), Expect = 5.580e-23
Identity = 47/101 (46.53%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    9 REERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLA-ETKQRDRGGGYGG 108
            R+++P PT+PP+KA+VGNL FDC + D    +F+DC++V+VH+ +DRET   +GF YVEF   + L+  LS++G  F  R +++D+A E +++DRGG  GG
Sbjct:   10 RQQKPLPTEPPFKAYVGNLPFDCVQGDFD-DIFRDCQIVNVHMCRDRETDNFKGFAYVEFGTVEDLQRGLSVHGHMFENRPLRIDVADEPRKKDRGGFRGG 109          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: B3RJK9_TRIAD (Eukaryotic translation initiation factor 4H n=2 Tax=Trichoplax TaxID=10227 RepID=B3RJK9_TRIAD)

HSP 1 Score: 99.0 bits (245), Expect = 1.650e-22
Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 0
Query:    9 REERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYG 107
            R  +PFP +PPY A+VGNL F+C + D+   +F+   VV V L +DRET   RGF YVEF   + L+ AL  NG+ F  R +KVD+A  K+ DRGGG G
Sbjct:   22 RVRKPFPEEPPYTAYVGNLPFNCVQRDLE-QIFKHLDVVSVRLVRDRETDKFRGFCYVEFSSPEGLKEALEYNGSEFENRNIKVDIAGGKRNDRGGGNG 119          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A146IPT6_MYCCL (Translation initiation factor 4B n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IPT6_MYCCL)

HSP 1 Score: 100 bits (250), Expect = 5.980e-22
Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    7 PQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGY 106
            P RE+ P PTQPPY AF+GNL FD T+ ++    F   K+  V + KDRE   P+GFGY+EFED +SL+ AL+ +GA+F GRT++V +AE  +  +GGG+
Sbjct:   66 PPREDLPLPTQPPYTAFIGNLAFDLTDLELG-DFFGSEKIKTVKIIKDREEK-PKGFGYIEFEDLESLKDALAKSGASFSGRTIRVSVAEPPKERQGGGF 163          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A0C9XDH0_9AGAR (RRM domain-containing protein n=2 Tax=Laccaria TaxID=29882 RepID=A0A0C9XDH0_9AGAR)

HSP 1 Score: 100 bits (249), Expect = 7.880e-22
Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 0
Query:    7 PQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAET-KQRDRGGGYGGG 109
            P RE+ P P+QPPY AF+GNL FD TE+D+  S F+  K   + + KD++   P+GFGYVEFED D L+ A++ +G+ F GRTV+V +AE  K+R   GG+GGG
Sbjct:   63 PPREDIPLPSQPPYTAFIGNLAFDLTEDDLG-SFFEGSKTKSIKIIKDKDDK-PKGFGYVEFEDLDGLKDAITKSGSNFSGRTVRVSVAEPPKER---GGFGGG 161          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: UPI0006B07FA8 (eukaryotic translation initiation factor 4H-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B07FA8)

HSP 1 Score: 97.4 bits (241), Expect = 8.000e-22
Identity = 53/121 (43.80%), Postives = 73/121 (60.33%), Query Frame = 0
Query:    1 YQERYAPQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGY-----GGGSGGRDRG 116
            Y   Y  +   RP PT+PPY  F+GNL     + DI   +F   KV  + L +DRET   +G+ YVEF+D +SL++AL LNGA F+G  ++VD+AE ++ DR GG+     GG   G DRG
Sbjct:    5 YYNNYGSRGPSRPLPTEPPYTVFLGNLPQGIVQGDID-EIFSGLKVRSIRLVRDRETDRFKGYCYVEFDDLESLKSALELNGADFVGNLIRVDVAEGRRNDRSGGFTNRGRGGSGPGYDRG 124          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A5C3M8B2_9AGAR (RRM domain-containing protein n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3M8B2_9AGAR)

HSP 1 Score: 100 bits (248), Expect = 1.160e-21
Identity = 54/107 (50.47%), Postives = 71/107 (66.36%), Query Frame = 0
Query:    3 ERYAPQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAET-KQRDRGGGYGG 108
            +R  P RE+ P PTQPPY AFVGNL FD TE+D+    F D K   + + KDR+   P+GFGYVEFED + L+ AL  +G+ F GRTV++ +AE  K+R    G+GG
Sbjct:   61 DRLGPPREDIPIPTQPPYTAFVGNLAFDLTEQDLE-QFFGDTKTKSIKIIKDRDEK-PKGFGYVEFEDVEGLKDALQKSGSNFSGRTVRISVAEPPKERS---GFGG 162          
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: UPI000440EBF8 (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440EBF8)

HSP 1 Score: 100 bits (248), Expect = 1.260e-21
Identity = 56/108 (51.85%), Postives = 74/108 (68.52%), Query Frame = 0
Query:    7 PQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYGGGSGGRD 114
            P RE+ P PTQPPY AF+GNL FD TE+D+  S F   +V +V + KDR+   P+GFGYVEFE  D L+ AL+ +G +  GRT++V +AE   ++RGG  GGG GG D
Sbjct:   64 PPREDIPLPTQPPYTAFIGNLAFDLTEQDLE-SFFGSFQVKNVKVIKDRDER-PKGFGYVEFEGLDDLKGALAQSGTSLSGRTIRVSVAEPP-KERGGFGGGGFGGDD 168          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1I8ACE1_9BILA4.680e-2444.23RRM domain-containing protein n=1 Tax=Steinernema ... [more]
A0A4V6S1H0_9AGAM1.060e-2351.79RRM domain-containing protein n=1 Tax=Bondarzewia ... [more]
UPI0016029FED1.260e-2351.04eukaryotic translation initiation factor 4H-like n... [more]
A0A4U5N692_STECR5.580e-2346.53RRM domain-containing protein n=1 Tax=Steinernema ... [more]
B3RJK9_TRIAD1.650e-2249.49Eukaryotic translation initiation factor 4H n=2 Ta... [more]
A0A146IPT6_MYCCL5.980e-2250.00Translation initiation factor 4B n=2 Tax=Mycena ch... [more]
A0A0C9XDH0_9AGAR7.880e-2250.96RRM domain-containing protein n=2 Tax=Laccaria Tax... [more]
UPI0006B07FA88.000e-2243.80eukaryotic translation initiation factor 4H-like n... [more]
A0A5C3M8B2_9AGAR1.160e-2150.47RRM domain-containing protein n=1 Tax=Crucibulum l... [more]
UPI000440EBF81.260e-2151.85hypothetical protein n=1 Tax=Stereum hirsutum (str... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 21..93
e-value: 2.0E-14
score: 63.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 23..91
e-value: 1.4E-13
score: 50.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 20..97
score: 14.794592
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..137
e-value: 4.7E-28
score: 100.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..160
NoneNo IPR availablePANTHERPTHR23236EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4Hcoord: 9..150
NoneNo IPR availablePANTHERPTHR23236:SF11EUKARYOTIC TRANSLATION INITIATION FACTOR 4Hcoord: 9..150
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 8..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig521contigP-wetherbeei_contig521:122..781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig521.1.1mRNA_P-wetherbeei_contig521.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig521 120..781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig521.1.1 ID=prot_P-wetherbeei_contig521.1.1|Name=mRNA_P-wetherbeei_contig521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp
YQERYAPQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVH
LAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQR
DRGGGYGGGSGGRDRGYGGDRDRGYGGGGDRDRGGYGGDRDRGYGGDRDR
GVYAGDRDRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf