mRNA_P-wetherbeei_contig521.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A1I8ACE1_9BILA (RRM domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8ACE1_9BILA) HSP 1 Score: 102 bits (255), Expect = 4.680e-24 Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 25 REERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYGGGSGG 336
R ++P PT+PPYKA+VGNL FDC + D +F+DC +V++H+ +DRE+ +GF YVEF + L LS+NG F R +++D+A+ ++ GG+ GG GG
Sbjct: 10 RAQKPLPTEPPYKAYVGNLPFDCVQGDFD-DIFRDCSIVNIHMCRDRESDQFKGFAYVEFATVEDLEKGLSVNGHMFENRPLRIDVADAPRKQDRGGFRGGRGG 112
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A4V6S1H0_9AGAM (RRM domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4V6S1H0_9AGAM) HSP 1 Score: 105 bits (263), Expect = 1.060e-23 Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 7 ERYAPQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYGGGSGGRD 342
+R P RE+ P PTQPPY AF+GNL FD TE D+ S F D KV V + KDR+ P+GFGYVEFED D+L+ ALS +G + + RT++V +AE + G +GGG GG D
Sbjct: 55 DRLGPPREDLPLPTQPPYTAFIGNLAFDLTEMDLQ-SFFGDSKVKSVKVIKDRDER-PKGFGYVEFEDLDALKDALSRSGTSLMSRTIRVSVAEPPKERAG--FGGGFGGDD 162
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: UPI0016029FED (eukaryotic translation initiation factor 4H-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016029FED) HSP 1 Score: 98.6 bits (244), Expect = 1.260e-23 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 37 PFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYGG 324
P PT+PPY A+VGNL + EED+ ++F KV V+L +DRET RGFG+VEFEDA+SL+ AL +GA+F R +KV++A ++ RG GY G
Sbjct: 8 PLPTEPPYNAYVGNLPYQIVEEDVR-NIFSGLKVKSVNLVQDRETGRSRGFGFVEFEDAESLKQALEFDGASFGDRNLKVNVARSRPDGRGRGYXG 102
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A4U5N692_STECR (RRM domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5N692_STECR) HSP 1 Score: 100 bits (250), Expect = 5.580e-23 Identity = 47/101 (46.53%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 25 REERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLA-ETKQRDRGGGYGG 324
R+++P PT+PP+KA+VGNL FDC + D +F+DC++V+VH+ +DRET +GF YVEF + L+ LS++G F R +++D+A E +++DRGG GG
Sbjct: 10 RQQKPLPTEPPFKAYVGNLPFDCVQGDFD-DIFRDCQIVNVHMCRDRETDNFKGFAYVEFGTVEDLQRGLSVHGHMFENRPLRIDVADEPRKKDRGGFRGG 109
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: B3RJK9_TRIAD (Eukaryotic translation initiation factor 4H n=2 Tax=Trichoplax TaxID=10227 RepID=B3RJK9_TRIAD) HSP 1 Score: 99.0 bits (245), Expect = 1.650e-22 Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 25 REERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYG 321
R +PFP +PPY A+VGNL F+C + D+ +F+ VV V L +DRET RGF YVEF + L+ AL NG+ F R +KVD+A K+ DRGGG G
Sbjct: 22 RVRKPFPEEPPYTAYVGNLPFNCVQRDLE-QIFKHLDVVSVRLVRDRETDKFRGFCYVEFSSPEGLKEALEYNGSEFENRNIKVDIAGGKRNDRGGGNG 119
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A146IPT6_MYCCL (Translation initiation factor 4B n=2 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IPT6_MYCCL) HSP 1 Score: 100 bits (250), Expect = 5.980e-22 Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query: 19 PQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGY 318
P RE+ P PTQPPY AF+GNL FD T+ ++ F K+ V + KDRE P+GFGY+EFED +SL+ AL+ +GA+F GRT++V +AE + +GGG+
Sbjct: 66 PPREDLPLPTQPPYTAFIGNLAFDLTDLELG-DFFGSEKIKTVKIIKDREEK-PKGFGYIEFEDLESLKDALAKSGASFSGRTIRVSVAEPPKERQGGGF 163
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A0C9XDH0_9AGAR (RRM domain-containing protein n=2 Tax=Laccaria TaxID=29882 RepID=A0A0C9XDH0_9AGAR) HSP 1 Score: 100 bits (249), Expect = 7.880e-22 Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 1
Query: 19 PQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAET-KQRDRGGGYGGG 327
P RE+ P P+QPPY AF+GNL FD TE+D+ S F+ K + + KD++ P+GFGYVEFED D L+ A++ +G+ F GRTV+V +AE K+R GG+GGG
Sbjct: 63 PPREDIPLPSQPPYTAFIGNLAFDLTEDDLG-SFFEGSKTKSIKIIKDKDDK-PKGFGYVEFEDLDGLKDAITKSGSNFSGRTVRVSVAEPPKER---GGFGGG 161
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: UPI0006B07FA8 (eukaryotic translation initiation factor 4H-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B07FA8) HSP 1 Score: 97.4 bits (241), Expect = 8.000e-22 Identity = 53/121 (43.80%), Postives = 73/121 (60.33%), Query Frame = 1
Query: 1 YQERYAPQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGY-----GGGSGGRDRG 348
Y Y + RP PT+PPY F+GNL + DI +F KV + L +DRET +G+ YVEF+D +SL++AL LNGA F+G ++VD+AE ++ DR GG+ GG G DRG
Sbjct: 5 YYNNYGSRGPSRPLPTEPPYTVFLGNLPQGIVQGDID-EIFSGLKVRSIRLVRDRETDRFKGYCYVEFDDLESLKSALELNGADFVGNLIRVDVAEGRRNDRSGGFTNRGRGGSGPGYDRG 124
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: A0A5C3M8B2_9AGAR (RRM domain-containing protein n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3M8B2_9AGAR) HSP 1 Score: 100 bits (248), Expect = 1.160e-21 Identity = 54/107 (50.47%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 7 ERYAPQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAET-KQRDRGGGYGG 324
+R P RE+ P PTQPPY AFVGNL FD TE+D+ F D K + + KDR+ P+GFGYVEFED + L+ AL +G+ F GRTV++ +AE K+R G+GG
Sbjct: 61 DRLGPPREDIPIPTQPPYTAFVGNLAFDLTEQDLE-QFFGDTKTKSIKIIKDRDEK-PKGFGYVEFEDVEGLKDALQKSGSNFSGRTVRISVAEPPKERS---GFGG 162
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Match: UPI000440EBF8 (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440EBF8) HSP 1 Score: 100 bits (248), Expect = 1.260e-21 Identity = 56/108 (51.85%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 19 PQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHLAKDRETTMPRGFGYVEFEDADSLRTALSLNGATFIGRTVKVDLAETKQRDRGGGYGGGSGGRD 342
P RE+ P PTQPPY AF+GNL FD TE+D+ S F +V +V + KDR+ P+GFGYVEFE D L+ AL+ +G + GRT++V +AE ++RGG GGG GG D
Sbjct: 64 PPREDIPLPTQPPYTAFIGNLAFDLTEQDLE-SFFGSFQVKNVKVIKDRDER-PKGFGYVEFEGLDDLKGALAQSGTSLSGRTIRVSVAEPP-KERGGFGGGGFGGDD 168 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig521.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig521.1.1 >prot_P-wetherbeei_contig521.1.1 ID=prot_P-wetherbeei_contig521.1.1|Name=mRNA_P-wetherbeei_contig521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp YQERYAPQREERPFPTQPPYKAFVGNLKFDCTEEDIAFSLFQDCKVVDVHback to top mRNA from alignment at P-wetherbeei_contig521:120..781- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig521.1.1 ID=mRNA_P-wetherbeei_contig521.1.1|Name=mRNA_P-wetherbeei_contig521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=662bp|location=Sequence derived from alignment at P-wetherbeei_contig521:120..781- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig521:120..781- >mRNA_P-wetherbeei_contig521.1.1 ID=mRNA_P-wetherbeei_contig521.1.1|Name=mRNA_P-wetherbeei_contig521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig521:120..781- (Phaeothamnion wetherbeei SAG_119_79)back to top |