prot_P-wetherbeei_contig51922.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig51922.1.1
Unique Nameprot_P-wetherbeei_contig51922.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length112
Homology
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: A0A7C3JQC6_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3JQC6_9PROT)

HSP 1 Score: 131 bits (329), Expect = 5.750e-35
Identity = 60/110 (54.55%), Postives = 85/110 (77.27%), Query Frame = 0
Query:    2 KTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQAE 111
            +TGRLR+LA    +R+   PE+PT+AE+GVPG+DF+SWTG+LAPTGTP +II++L+ ++ R   LPE  ++L+ +GFDLVG +P  F A IK +IAR GK+++ A IQAE
Sbjct:  214 RTGRLRILATAGAQRTNAAPELPTIAESGVPGYDFNSWTGFLAPTGTPADIISRLNAEVVRITRLPETSERLSAVGFDLVGSSPAEFGAHIKANIARIGKVVREANIQAE 323          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: A0A7Y9IRY8_9BURK (Tripartite-type tricarboxylate transporter receptor subunit TctC n=2 Tax=Pigmentiphaga litoralis TaxID=516702 RepID=A0A7Y9IRY8_9BURK)

HSP 1 Score: 128 bits (321), Expect = 1.060e-33
Identity = 57/110 (51.82%), Postives = 80/110 (72.73%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQA 110
            +K G+LRVL + +PKRS   P+ PT+AEAG+PG+ + +W G +AP+ TP  ++ +LHT+  + +  P V+DKL +LGFDLVG  P+ F ALIK D+AR G L+K AGIQA
Sbjct:  222 VKEGKLRVLGVSTPKRSAAAPDWPTIAEAGLPGYSYAAWNGIVAPSATPPAVVARLHTEFAKAIATPAVRDKLASLGFDLVGSGPDEFGALIKADVARLGALVKKAGIQA 331          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: A0A5P2HF46_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Cupriavidus pauculus TaxID=82633 RepID=A0A5P2HF46_9BURK)

HSP 1 Score: 126 bits (316), Expect = 6.080e-33
Identity = 60/111 (54.05%), Postives = 85/111 (76.58%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQAE 111
            M+ G++R LA+GSP+R+P +P+VPT+AE+GVPG+D D+W GY+AP G P+ I+ +LH+ I    GL E KDKLT  G+ + GGTP+A AA IK D A++G +I+AAGI A+
Sbjct:  225 MRNGKVRALAVGSPQRNPLMPDVPTIAESGVPGYDSDTWYGYIAPAGVPQPILARLHSAIVA--GLKENKDKLTNDGYVVDGGTPQAMAAAIKADTAKWGGIIRAAGITAD 333          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: A0A1F4E310_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4E310_9PROT)

HSP 1 Score: 124 bits (312), Expect = 1.730e-32
Identity = 58/110 (52.73%), Postives = 79/110 (71.82%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQA 110
            ++ G+LR LA+ S KRSP++PE+PTVAEA +PGF  D W G  AP GTPKEI+ KLH +I R +  P+ K +L TLG D V  TP+ F A +KT+  ++GKL++ AGI+A
Sbjct:  208 VRGGKLRALAVSSAKRSPSVPELPTVAEAALPGFAVDQWYGLFAPAGTPKEIVAKLHGEIARLVAQPDAKQRLLTLGLDPVASTPDEFTAYVKTETVKWGKLVREAGIRA 317          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: A0A1F4DII2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DII2_9PROT)

HSP 1 Score: 124 bits (311), Expect = 2.530e-32
Identity = 57/112 (50.89%), Postives = 82/112 (73.21%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFD-LVGGTPEAFAALIKTDIARFGKLIKAAGIQAE 111
            M++G+LR L +  PKRS + P++PT+AEAGVPG++   W G LAP GTPK +ITK+H D+ + L  PE++ KL ++G D +VGGTP   AA IK + A++ KL+KAAG++ E
Sbjct:  209 MQSGKLRGLGVTGPKRSASAPQLPTIAEAGVPGYELTPWHGLLAPAGTPKPVITKVHADVVKALAAPEIRTKLVSVGIDNIVGGTPAELAAFIKAETAKYAKLVKAAGLRRE 320          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: UPI001989D11A (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001989D11A)

HSP 1 Score: 123 bits (309), Expect = 5.750e-32
Identity = 55/111 (49.55%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQAE 111
            +K+G++RV+AI S KRSPTLP++PT++EAGVPGF+  +W G+L P  TP   ITKLH D+ +   LP+ ++++   GFD +G +P+ FAA I  ++AR+ K+I AAGI+ E
Sbjct:  217 VKSGKVRVIAIASGKRSPTLPDLPTMSEAGVPGFEASTWAGFLVPAATPPATITKLHADVLKAFALPDTRERMAANGFDPIGNSPKEFAAYIDAEVARWAKVITAAGIKPE 327          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: A0A1F4CY62_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CY62_9PROT)

HSP 1 Score: 123 bits (308), Expect = 7.630e-32
Identity = 58/111 (52.25%), Postives = 83/111 (74.77%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQAE 111
            +KTG+LRVLA    KR   LP+VPT+AE+G PGF+  +W G LAP+GTPK ++ +LH +  R L +  VKD+L  LGFD+VG  PEAFAA +KT+I ++ ++++A+GI+AE
Sbjct:  214 VKTGKLRVLATTGLKRFSLLPQVPTIAESGFPGFEATAWYGLLAPSGTPKAVVARLHDETVRALRMSSVKDRLEPLGFDIVGSKPEAFAAYMKTEIKKWAEIVEASGIKAE 324          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: A0A1F4DF64_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DF64_9PROT)

HSP 1 Score: 123 bits (308), Expect = 8.730e-32
Identity = 56/111 (50.45%), Postives = 84/111 (75.68%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQAE 111
            +++GRLR LA+ S KRSP +P+VPT+AE+G+PGF+  +W G LAP+GTP  II+KL+ ++ R L LPE+ ++L T G D+V  +P  FAA IK D+A++ KL++ AGI+ +
Sbjct:  221 VRSGRLRALAVTSAKRSPAVPDVPTIAESGLPGFEQSAWHGLLAPSGTPLTIISKLNAEVVRILRLPEITERLATQGVDVVASSPAEFAAFIKQDVAKYAKLVQTAGIRVD 331          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: Q46T26_CUPPJ (Uncharacterized protein UPF0065 n=7 Tax=Cupriavidus TaxID=106589 RepID=Q46T26_CUPPJ)

HSP 1 Score: 122 bits (306), Expect = 1.480e-31
Identity = 59/110 (53.64%), Postives = 79/110 (71.82%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQA 110
            +K G+LR LA+ S KRSP LP+VPT+ EAG  G  F SW G LAPTGTPKEIIT+L+ ++TR + LPE+++KL  + +D VG TPE FA +I  D AR+ K++K    +A
Sbjct:  212 IKAGKLRPLAVLSDKRSPALPDVPTMQEAGYSGMAFGSWAGLLAPTGTPKEIITRLNKEVTRIVALPEIREKLAAIDYDAVGSTPEQFATVIAQDTARWKKIVKETNYKA 321          
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Match: A0A7Y6TZ12_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Schlegelella koreensis TaxID=2742824 RepID=A0A7Y6TZ12_9BURK)

HSP 1 Score: 122 bits (306), Expect = 1.480e-31
Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 0
Query:    1 MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPKEIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFGKLIKAAGIQAE 111
            +K+GRLR LAI   KR PTLP+VPT AEAG+P +DF  W G LAP GTP+ I+ KL T+I R L LP+VK +L   G + V  TP  F +LI++D  RFGKLIK+AGI+ E
Sbjct:  213 IKSGRLRPLAITGTKRLPTLPDVPTFAEAGLPAYDFQLWFGVLAPAGTPRPIVEKLSTEIARILALPDVKQQLADQGLETVYRTPAEFDSLIRSDHERFGKLIKSAGIKIE 323          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51922.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3JQC6_9PROT5.750e-3554.55Tripartite tricarboxylate transporter substrate bi... [more]
A0A7Y9IRY8_9BURK1.060e-3351.82Tripartite-type tricarboxylate transporter recepto... [more]
A0A5P2HF46_9BURK6.080e-3354.05Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F4E310_9PROT1.730e-3252.73Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4DII2_9PROT2.530e-3250.89Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
UPI001989D11A5.750e-3249.55Tripartite tricarboxylate transporter substrate bi... [more]
A0A1F4CY62_9PROT7.630e-3252.25Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1F4DF64_9PROT8.730e-3250.45Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
Q46T26_CUPPJ1.480e-3153.64Uncharacterized protein UPF0065 n=7 Tax=Cupriavidu... [more]
A0A7Y6TZ12_9BURK1.480e-3156.76Tripartite tricarboxylate transporter substrate bi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042100Bordetella uptake gene, domain 1GENE3D3.40.190.150Bordetella uptake gene, domain 1coord: 37..100
e-value: 1.6E-31
score: 111.5
IPR005064Bordetella uptake genePFAMPF03401TctCcoord: 2..107
e-value: 1.5E-30
score: 106.2
IPR005064Bordetella uptake genePANTHERPTHR42928TRICARBOXYLATE-BINDING PROTEINcoord: 2..111
NoneNo IPR availableGENE3D3.40.190.10coord: 1..36
e-value: 1.6E-31
score: 111.5
NoneNo IPR availablePANTHERPTHR42928:SF5BLR1237 PROTEINcoord: 2..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51922contigP-wetherbeei_contig51922:78..413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51922.1.1mRNA_P-wetherbeei_contig51922.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig51922 69..413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig51922.1.1 ID=prot_P-wetherbeei_contig51922.1.1|Name=mRNA_P-wetherbeei_contig51922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp
MKTGRLRVLAIGSPKRSPTLPEVPTVAEAGVPGFDFDSWTGYLAPTGTPK
EIITKLHTDITRTLGLPEVKDKLTTLGFDLVGGTPEAFAALIKTDIARFG
KLIKAAGIQAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042100Bug_dom1
IPR005064BUG