prot_P-wetherbeei_contig51608.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig51608.1.1
Unique Nameprot_P-wetherbeei_contig51608.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length152
Homology
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A536ZVI3_9PROT (Fe-S cluster assembly transcriptional regulator IscR n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A536ZVI3_9PROT)

HSP 1 Score: 238 bits (608), Expect = 1.270e-78
Identity = 122/147 (82.99%), Postives = 129/147 (87.76%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVLKDLRP 147
            MRLTTKGRFAVTAMVDLALRQ  GPVTL+AISERQHISLSYLEQLFGKLRR KLVSSVRGPGGGYNLAQ  Q ++VA I+ AVDEPLDATQCGGKENC D ++RCMTHDLWATLN KM DYLSSVTL DLV HQ GK V V+KD RP
Sbjct:    1 MRLTTKGRFAVTAMVDLALRQNRGPVTLAAISERQHISLSYLEQLFGKLRRAKLVSSVRGPGGGYNLAQAAQAVTVASIVAAVDEPLDATQCGGKENCHD-DRRCMTHDLWATLNEKMHDYLSSVTLADLVAHQAGKPVAVIKDFRP 146          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A3N5N1L0_9PROT (Fe-S cluster assembly transcriptional regulator IscR n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5N1L0_9PROT)

HSP 1 Score: 238 bits (607), Expect = 1.740e-78
Identity = 124/152 (81.58%), Postives = 131/152 (86.18%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVLKDLRPGTKPA 152
            MRLTTKGRFAVTAMVDLA+RQ  GPVTL+AISERQHISLSYLEQLFGKLRR KLVSSVRGPGGGYNLAQ  Q +SVADI+ AVDEPLDATQCGGKENC D +KRCMTHDLWATLN KM +YLSSVTL DLV HQ GK V VLKD R   + A
Sbjct:    1 MRLTTKGRFAVTAMVDLAMRQNRGPVTLAAISERQHISLSYLEQLFGKLRRAKLVSSVRGPGGGYNLAQAPQGISVADIVSAVDEPLDATQCGGKENCHD-DKRCMTHDLWATLNEKMHEYLSSVTLADLVAHQNGKPVAVLKDFRSSEQVA 151          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A522W0J1_9PROT (Fe-S cluster assembly transcriptional regulator IscR n=6 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A522W0J1_9PROT)

HSP 1 Score: 235 bits (600), Expect = 2.740e-77
Identity = 118/151 (78.15%), Postives = 129/151 (85.43%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVLKDLRPGTKP 151
            MRLTTKGRFAVTAMVDLA+RQ  GPVTL+ ISERQ ISLSYLEQLFGKLRR  +VSSVRGPGGGYNLAQP Q ++VADII+AVDEPLDATQCGGKENC+   KRCMTHDLWA LN KM+DYL+SVTL DLV HQ GK V VL+D R   +P
Sbjct:    1 MRLTTKGRFAVTAMVDLAMRQARGPVTLAGISERQRISLSYLEQLFGKLRRAGIVSSVRGPGGGYNLAQPAQGVTVADIIVAVDEPLDATQCGGKENCLPDNKRCMTHDLWARLNEKMYDYLASVTLADLVAHQHGKQVAVLQDWRSPEQP 151          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A0S8BBI1_9PROT (DNA-binding protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BBI1_9PROT)

HSP 1 Score: 234 bits (597), Expect = 7.590e-77
Identity = 119/146 (81.51%), Postives = 128/146 (87.67%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVLKDLR 146
            MRLTTKGRFAVTAMVDLA+RQ  GPVTL+AISERQ ISLSYLEQLFGKLRRH LV SVRGPGGGY LA P+Q +SVADII AVDEPLDATQCGG+ENC+D ++RCMTHDLWATLN KM+DYLSSVTL DLV HQ GK V VL D R
Sbjct:    1 MRLTTKGRFAVTAMVDLAMRQAKGPVTLAAISERQRISLSYLEQLFGKLRRHALVKSVRGPGGGYYLAVPVQDVSVADIIAAVDEPLDATQCGGRENCLD-DRRCMTHDLWATLNAKMYDYLSSVTLADLVAHQHGKHVAVLHDWR 145          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A1F4FFE3_9PROT (Fe-S cluster assembly transcriptional regulator IscR n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FFE3_9PROT)

HSP 1 Score: 234 bits (596), Expect = 8.250e-77
Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVLKDLRPGTKPA 152
            MRLTTKGRFAVTAMVDL LRQ  GPVTL+AISERQHISLSYLEQLFGKLRR  LVSSVRGPGGGYNLA+P Q ++VADI+ AVDE LDATQCGGKENC D +KRCMTHDLWATLN KM+DYLSSVTL DLV H  GK V V+KD R   + A
Sbjct:    1 MRLTTKGRFAVTAMVDLTLRQARGPVTLAAISERQHISLSYLEQLFGKLRRASLVSSVRGPGGGYNLARPAQGITVADIVTAVDETLDATQCGGKENCHD-DKRCMTHDLWATLNEKMYDYLSSVTLADLVAHHSGKPVAVIKDFRTSERVA 151          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A1F4AT91_9PROT (Fe-S cluster assembly transcriptional regulator IscR n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AT91_9PROT)

HSP 1 Score: 231 bits (588), Expect = 1.780e-75
Identity = 117/152 (76.97%), Postives = 130/152 (85.53%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVLKDLRPGTKPA 152
            MRLTTKGRFAVTAMVDLA+RQ  GPVTL+ ISERQ ISLSYLEQLFGKLRR  +VSSVRGPGGGYNLAQP+  ++VADII+AVDEPLDATQCGGKENC+ G+KRCMTHDLW  LN KMF+YL+SVTL DLV HQ GK V VL+  R   +PA
Sbjct:    1 MRLTTKGRFAVTAMVDLAMRQNRGPVTLAGISERQRISLSYLEQLFGKLRRAGIVSSVRGPGGGYNLAQPVTKVTVADIIVAVDEPLDATQCGGKENCL-GDKRCMTHDLWERLNEKMFEYLASVTLADLVAHQHGKPVAVLQSWRDADQPA 151          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A1F3YES4_9PROT (Fe-S cluster assembly transcriptional regulator IscR n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YES4_9PROT)

HSP 1 Score: 224 bits (572), Expect = 3.740e-73
Identity = 114/152 (75.00%), Postives = 132/152 (86.84%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVLKDLRPGTKPA 152
            MRLTTKGRFAVTAMVDL++RQT GPVTL+AISERQ ISLSYLEQLFGKLRR KLV+SVRGPGGGY LA+P  +++VA+II AVDEP+DATQCGGKENC D ++RC+THDLWATLN KM DYLSSV+L D+V HQ+GK V V++D R   K A
Sbjct:    1 MRLTTKGRFAVTAMVDLSMRQTRGPVTLAAISERQRISLSYLEQLFGKLRRAKLVTSVRGPGGGYCLAKPTGSITVAEIITAVDEPIDATQCGGKENCND-DRRCITHDLWATLNEKMNDYLSSVSLADVVSHQQGKQVAVIRDFRTPDKVA 151          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A011QAE3_ACCSB (HTH-type transcriptional regulator IscR n=2 Tax=unclassified Candidatus Accumulibacter TaxID=2619054 RepID=A0A011QAE3_ACCSB)

HSP 1 Score: 223 bits (567), Expect = 3.110e-72
Identity = 118/154 (76.62%), Postives = 128/154 (83.12%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQ---RGKDVNVLKDLR-PGTK 150
            MRLTTKGRFAVTAM+DLALR   GPV+L+ IS+RQ ISLSYLEQLFGKLRRH+LV SVRGPGGGY LA+P   M+VADII AVDEPLDATQCGG+ENC D E RCMTHDLWATLN KMFDYLSSVTL +LVD Q   RG DV VL D R PG +
Sbjct:    1 MRLTTKGRFAVTAMIDLALRCADGPVSLAGISDRQKISLSYLEQLFGKLRRHQLVGSVRGPGGGYCLARPTSAMTVADIIRAVDEPLDATQCGGRENCQDDE-RCMTHDLWATLNVKMFDYLSSVTLAELVDQQLSRRGADVAVLHDARRPGVR 153          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A1F4C612_9PROT (Fe-S cluster assembly transcriptional regulator IscR n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4C612_9PROT)

HSP 1 Score: 217 bits (552), Expect = 5.410e-70
Identity = 114/149 (76.51%), Postives = 124/149 (83.22%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNV--LKDLRP 147
            MRLTTKGRFAVTAM+DLALR   GPVTL+ I  RQ ISLSYLEQLFGKLRRH LV SVRGPGGGY LA+P + +SVADIILAVDEPLDATQCGG ENC + +KRCMTHDLWATLN K+ DYL+SVTLQDLV+ Q  KD NV  L D RP
Sbjct:    1 MRLTTKGRFAVTAMLDLALRHQQGPVTLAGIGARQSISLSYLEQLFGKLRRHALVESVRGPGGGYCLARPTEKVSVADIILAVDEPLDATQCGGMENCQE-DKRCMTHDLWATLNDKLHDYLNSVTLQDLVNEQLAKDGNVTRLMDRRP 148          
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Match: A0A354J0F8_9BURK (Fe-S cluster assembly transcriptional regulator IscR n=16 Tax=Proteobacteria TaxID=1224 RepID=A0A354J0F8_9BURK)

HSP 1 Score: 216 bits (551), Expect = 8.490e-70
Identity = 107/146 (73.29%), Postives = 124/146 (84.93%), Query Frame = 0
Query:    1 MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLRRHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCIDGEK----RCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVL 142
            MRLTTKGRFAVTAM+DLALRQ  GPVTLS IS+RQ ISLSYLEQLFGKLRRH++V S+RGPGGGY+LA+P + ++VADII+AVDEPLDATQCGGKENC   +     RCMTH+LW TLN KM DYL SV+LQDLVD Q+ K+ NV+
Sbjct:    1 MRLTTKGRFAVTAMIDLALRQGNGPVTLSGISQRQAISLSYLEQLFGKLRRHEIVESIRGPGGGYSLARPAEKVTVADIIIAVDEPLDATQCGGKENCHGADAASGTRCMTHELWTTLNAKMVDYLDSVSLQDLVDQQKQKEQNVV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51608.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536ZVI3_9PROT1.270e-7882.99Fe-S cluster assembly transcriptional regulator Is... [more]
A0A3N5N1L0_9PROT1.740e-7881.58Fe-S cluster assembly transcriptional regulator Is... [more]
A0A522W0J1_9PROT2.740e-7778.15Fe-S cluster assembly transcriptional regulator Is... [more]
A0A0S8BBI1_9PROT7.590e-7781.51DNA-binding protein n=1 Tax=Betaproteobacteria bac... [more]
A0A1F4FFE3_9PROT8.250e-7778.95Fe-S cluster assembly transcriptional regulator Is... [more]
A0A1F4AT91_9PROT1.780e-7576.97Fe-S cluster assembly transcriptional regulator Is... [more]
A0A1F3YES4_9PROT3.740e-7375.00Fe-S cluster assembly transcriptional regulator Is... [more]
A0A011QAE3_ACCSB3.110e-7276.62HTH-type transcriptional regulator IscR n=2 Tax=un... [more]
A0A1F4C612_9PROT5.410e-7076.51Fe-S cluster assembly transcriptional regulator Is... [more]
A0A354J0F8_9BURK8.490e-7073.29Fe-S cluster assembly transcriptional regulator Is... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000944Transcription regulator Rrf2TIGRFAMTIGR00738TIGR00738coord: 1..132
e-value: 1.3E-44
score: 149.3
IPR000944Transcription regulator Rrf2PFAMPF02082Rrf2coord: 3..132
e-value: 8.3E-41
score: 139.3
IPR000944Transcription regulator Rrf2PANTHERPTHR33221WINGED HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, RRF2 FAMILYcoord: 1..141
IPR000944Transcription regulator Rrf2PROSITEPS51197HTH_RRF2_2coord: 2..132
score: 43.709526
IPR010242Transcription factor HTH, IscRTIGRFAMTIGR02010TIGR02010coord: 1..134
e-value: 1.9E-63
score: 210.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..144
e-value: 1.6E-46
score: 159.7
NoneNo IPR availablePANTHERPTHR33221:SF10HTH-TYPE TRANSCRIPTIONAL REGULATOR ISCRcoord: 1..141
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 2..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51608contigP-wetherbeei_contig51608:83..538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51608.1.1mRNA_P-wetherbeei_contig51608.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig51608 83..538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig51608.1.1 ID=prot_P-wetherbeei_contig51608.1.1|Name=mRNA_P-wetherbeei_contig51608.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp
MRLTTKGRFAVTAMVDLALRQTGGPVTLSAISERQHISLSYLEQLFGKLR
RHKLVSSVRGPGGGYNLAQPMQTMSVADIILAVDEPLDATQCGGKENCID
GEKRCMTHDLWATLNTKMFDYLSSVTLQDLVDHQRGKDVNVLKDLRPGTK
PA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000944Tscrpt_reg_Rrf2
IPR010242TF_HTH_IscR
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf