prot_P-wetherbeei_contig51563.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig51563.1.1
Unique Nameprot_P-wetherbeei_contig51563.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length99
Homology
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A4P5U9C2_9BURK (Lactate-binding periplasmic protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5U9C2_9BURK)

HSP 1 Score: 146 bits (369), Expect = 3.570e-41
Identity = 68/97 (70.10%), Postives = 85/97 (87.63%), Query Frame = 0
Query:    2 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 98
            DFV+SKRKW+AL+ DQ+A+V AA DEW + TWMSQE+EDRKAV+KRDP+TL+ WGEKEKA+ R+V++ VW+ WSKKSPLAK+IY SQV FL +IGKL
Sbjct:  221 DFVVSKRKWDALTPDQQAVVRAAADEWCMATWMSQEIEDRKAVSKRDPSTLITWGEKEKAQLRQVARGVWENWSKKSPLAKEIYTSQVNFLVAIGKL 317          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A3N1M9U6_9PROT (TRAP-type mannitol/chloroaromatic compound transport system substrate-binding protein n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1M9U6_9PROT)

HSP 1 Score: 142 bits (359), Expect = 1.590e-39
Identity = 69/98 (70.41%), Postives = 82/98 (83.67%), Query Frame = 0
Query:    1 IDFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 98
            +DFV+ + KWNALSA+ KA VT+AVDEWSL TWMSQE  DR A AKR P TL+ WGEKEKA+ RKV++ VW+ WSKKSPLA +IY+SQVKFL+SIGKL
Sbjct:  240 MDFVIRRSKWNALSAEHKAAVTSAVDEWSLATWMSQEHADRLAAAKRKPETLITWGEKEKADLRKVARGVWESWSKKSPLATEIYQSQVKFLESIGKL 337          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A1Y6C7V6_9HYPH (Extracytoplasmic solute receptor protein n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6C7V6_9HYPH)

HSP 1 Score: 71.6 bits (174), Expect = 1.390e-12
Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 0
Query:    2 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKR--DPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 98
            D  ++  KWNALS D KA V  A  ++S        ++DR+   K   +  TL+ W  + +  FR+ +Q +W+ WSKKSP+A ++YESQV F+K IG L
Sbjct:  251 DVAVNLDKWNALSDDLKATVEMAARDFSRDMVERIAVQDREDAQKMRAEGVTLIDWSPESRRIFRQKAQGIWETWSKKSPMAGKVYESQVSFMKKIGLL 349          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A0K2DGQ2_9HYPH (C4-dicarboxylate ABC transporter substrate-binding protein n=2 Tax=Chelatococcus TaxID=28209 RepID=A0A0K2DGQ2_9HYPH)

HSP 1 Score: 70.1 bits (170), Expect = 4.860e-12
Identity = 35/90 (38.89%), Postives = 58/90 (64.44%), Query Frame = 0
Query:    9 KWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPA--TLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIG 96
            KW AL  DQ+ I  AAVD+ ++       + D+KA A+   A  +L  W  +++A+FRKV+Q+VW  W+ +SP+AK+ ++S V ++K +G
Sbjct:  250 KWKALPEDQQRIFEAAVDQIAIEVPTRSTIADQKAAAELREAGVSLYDWSSEDRAQFRKVAQEVWLDWAGRSPMAKKTFDSHVAYMKQLG 339          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A3N1MH60_9PROT (TRAP-type mannitol/chloroaromatic compound transport system substrate-binding protein n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1MH60_9PROT)

HSP 1 Score: 66.6 bits (161), Expect = 8.630e-11
Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 0
Query:    9 KWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAV--AKRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSI 95
            KWNALS D + ++  A  +++        +ED KA   AK     L+ W  +E+ +FR ++Q  W  WSKKSP+AK++Y+SQ+ FLK +
Sbjct:  251 KWNALSKDVQVMLEVATRDFARDMIQRVAVEDYKAAEAAKAQGVELINWSAEERKKFRALAQAAWADWSKKSPMAKRVYDSQLAFLKRL 339          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A7Y8HD00_9DELT (TRAP transporter substrate-binding protein DctP n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A7Y8HD00_9DELT)

HSP 1 Score: 65.9 bits (159), Expect = 1.520e-10
Identity = 33/98 (33.67%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    3 FVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVA--KRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 98
            +V++ + WN+L  D +AI+ +A  E+S   +    ++D +A+   K+    ++ W + E  + RKV+ +VW+ ++KKSP AKQ+Y+SQ+ ++K +G L
Sbjct:  226 YVVNMKAWNSLPKDVQAILESAGREYSAEMFAQNLVKDYEALENFKKKGCQVIYWPDSEIKKIRKVAMEVWEDYAKKSPKAKQVYDSQIAWMKQLGLL 323          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A537FHM4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537FHM4_9PROT)

HSP 1 Score: 63.2 bits (152), Expect = 3.380e-10
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0
Query:    2 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPATLVA--WGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIG 96
            +F ++   W  L  D KA++  AV EW+        ++D + V +     + A  W E E  + R ++Q  W++WSKK+PLAKQ Y+SQ+ +LK +G
Sbjct:   77 EFAVNMDAWKKLPDDLKALLHTAVREWTWDQVQRVAVDDLRVVRELAAKGIKAAQWPESEMVKIRALAQRTWEEWSKKTPLAKQAYDSQLAWLKELG 173          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: UPI00167278A5 (TRAP transporter substrate-binding protein n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI00167278A5)

HSP 1 Score: 63.9 bits (154), Expect = 7.930e-10
Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 0
Query:    5 LSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAK--RDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIG 96
            ++K KW+AL    K I+  A+ + + +T M+ E+++ +A AK      TL  W  +++A FRK +Q  WQ W+ K+P A+ + +S VKFL  +G
Sbjct:  245 INKAKWDALPEHLKRIMQVAMQKLAFQTAMTFEIKNSEAAAKLRAQGVTLHDWSAEDRATFRKAAQTAWQGWADKTPEARALVDSHVKFLTQLG 338          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A537DP50_9PROT (Extracytoplasmic solute receptor protein n=3 Tax=Bacteria TaxID=2 RepID=A0A537DP50_9PROT)

HSP 1 Score: 63.2 bits (152), Expect = 1.560e-9
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0
Query:    2 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPATLVA--WGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIG 96
            +F ++   W  L  D KA++  AV EW+        ++D + V +     + A  W E E  + R ++Q  W++WSKK+PLAKQ Y+SQ+ +LK +G
Sbjct:  260 EFAVNMDAWKKLPDDLKALLHTAVREWTWDQVQRVAVDDLRVVRELAAKGIKAAQWPESEMVKIRALAQRTWEEWSKKTPLAKQAYDSQLAWLKELG 356          
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A7Y8L3R6_9DELT (TRAP transporter substrate-binding protein DctP n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A7Y8L3R6_9DELT)

HSP 1 Score: 62.0 bits (149), Expect = 3.870e-9
Identity = 32/99 (32.32%), Postives = 61/99 (61.62%), Query Frame = 0
Query:    2 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVA--KRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 98
            +F ++ ++W  L AD K I+ +AV E+S        ++D +A+   K    T ++W   E  + R+V+Q VW++W+KKSP  +++ +S V++LK +G++
Sbjct:  243 EFAVNTQEWEKLPADIKQILKSAVREFSQDMLARVAIDDLRALREMKTTGVTPISWELSEVEKMRRVAQQVWEEWAKKSPNCRKVVDSNVQWLKELGRI 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A4P5U9C2_9BURK3.570e-4170.10Lactate-binding periplasmic protein n=1 Tax=Comamo... [more]
A0A3N1M9U6_9PROT1.590e-3970.41TRAP-type mannitol/chloroaromatic compound transpo... [more]
A0A1Y6C7V6_9HYPH1.390e-1240.40Extracytoplasmic solute receptor protein n=1 Tax=T... [more]
A0A0K2DGQ2_9HYPH4.860e-1238.89C4-dicarboxylate ABC transporter substrate-binding... [more]
A0A3N1MH60_9PROT8.630e-1139.33TRAP-type mannitol/chloroaromatic compound transpo... [more]
A0A7Y8HD00_9DELT1.520e-1033.67TRAP transporter substrate-binding protein DctP n=... [more]
A0A537FHM4_9PROT3.380e-1035.05Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
UPI00167278A57.930e-1036.17TRAP transporter substrate-binding protein n=1 Tax... [more]
A0A537DP50_9PROT1.560e-935.05Extracytoplasmic solute receptor protein n=3 Tax=B... [more]
A0A7Y8L3R6_9DELT3.870e-932.32TRAP transporter substrate-binding protein DctP n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018389TRAP transporter solute receptor DctPPFAMPF03480DctPcoord: 3..76
e-value: 1.7E-6
score: 27.5
IPR038404TRAP transporter solute receptor DctP superfamilyGENE3D3.40.190.170coord: 1..96
e-value: 1.2E-15
score: 59.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51563contigP-wetherbeei_contig51563:255..551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51563.1.1mRNA_P-wetherbeei_contig51563.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig51563 255..551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig51563.1.1 ID=prot_P-wetherbeei_contig51563.1.1|Name=mRNA_P-wetherbeei_contig51563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp
IDFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPA
TLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018389DctP_fam
IPR038404TRAP_DctP_sf