mRNA_P-wetherbeei_contig51563.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A4P5U9C2_9BURK (Lactate-binding periplasmic protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4P5U9C2_9BURK) HSP 1 Score: 146 bits (369), Expect = 3.570e-41 Identity = 68/97 (70.10%), Postives = 85/97 (87.63%), Query Frame = 1
Query: 4 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 294
DFV+SKRKW+AL+ DQ+A+V AA DEW + TWMSQE+EDRKAV+KRDP+TL+ WGEKEKA+ R+V++ VW+ WSKKSPLAK+IY SQV FL +IGKL
Sbjct: 221 DFVVSKRKWDALTPDQQAVVRAAADEWCMATWMSQEIEDRKAVSKRDPSTLITWGEKEKAQLRQVARGVWENWSKKSPLAKEIYTSQVNFLVAIGKL 317
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A3N1M9U6_9PROT (TRAP-type mannitol/chloroaromatic compound transport system substrate-binding protein n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1M9U6_9PROT) HSP 1 Score: 142 bits (359), Expect = 1.590e-39 Identity = 69/98 (70.41%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 1 IDFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 294
+DFV+ + KWNALSA+ KA VT+AVDEWSL TWMSQE DR A AKR P TL+ WGEKEKA+ RKV++ VW+ WSKKSPLA +IY+SQVKFL+SIGKL
Sbjct: 240 MDFVIRRSKWNALSAEHKAAVTSAVDEWSLATWMSQEHADRLAAAKRKPETLITWGEKEKADLRKVARGVWESWSKKSPLATEIYQSQVKFLESIGKL 337
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A1Y6C7V6_9HYPH (Extracytoplasmic solute receptor protein n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6C7V6_9HYPH) HSP 1 Score: 71.6 bits (174), Expect = 1.390e-12 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 4 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKR--DPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 294
D ++ KWNALS D KA V A ++S ++DR+ K + TL+ W + + FR+ +Q +W+ WSKKSP+A ++YESQV F+K IG L
Sbjct: 251 DVAVNLDKWNALSDDLKATVEMAARDFSRDMVERIAVQDREDAQKMRAEGVTLIDWSPESRRIFRQKAQGIWETWSKKSPMAGKVYESQVSFMKKIGLL 349
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A0K2DGQ2_9HYPH (C4-dicarboxylate ABC transporter substrate-binding protein n=2 Tax=Chelatococcus TaxID=28209 RepID=A0A0K2DGQ2_9HYPH) HSP 1 Score: 70.1 bits (170), Expect = 4.860e-12 Identity = 35/90 (38.89%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 25 KWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPA--TLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIG 288
KW AL DQ+ I AAVD+ ++ + D+KA A+ A +L W +++A+FRKV+Q+VW W+ +SP+AK+ ++S V ++K +G
Sbjct: 250 KWKALPEDQQRIFEAAVDQIAIEVPTRSTIADQKAAAELREAGVSLYDWSSEDRAQFRKVAQEVWLDWAGRSPMAKKTFDSHVAYMKQLG 339
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A3N1MH60_9PROT (TRAP-type mannitol/chloroaromatic compound transport system substrate-binding protein n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1MH60_9PROT) HSP 1 Score: 66.6 bits (161), Expect = 8.630e-11 Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 25 KWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAV--AKRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSI 285
KWNALS D + ++ A +++ +ED KA AK L+ W +E+ +FR ++Q W WSKKSP+AK++Y+SQ+ FLK +
Sbjct: 251 KWNALSKDVQVMLEVATRDFARDMIQRVAVEDYKAAEAAKAQGVELINWSAEERKKFRALAQAAWADWSKKSPMAKRVYDSQLAFLKRL 339
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A7Y8HD00_9DELT (TRAP transporter substrate-binding protein DctP n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A7Y8HD00_9DELT) HSP 1 Score: 65.9 bits (159), Expect = 1.520e-10 Identity = 33/98 (33.67%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 7 FVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVA--KRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 294
+V++ + WN+L D +AI+ +A E+S + ++D +A+ K+ ++ W + E + RKV+ +VW+ ++KKSP AKQ+Y+SQ+ ++K +G L
Sbjct: 226 YVVNMKAWNSLPKDVQAILESAGREYSAEMFAQNLVKDYEALENFKKKGCQVIYWPDSEIKKIRKVAMEVWEDYAKKSPKAKQVYDSQIAWMKQLGLL 323
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A537FHM4_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537FHM4_9PROT) HSP 1 Score: 63.2 bits (152), Expect = 3.380e-10 Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 4 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPATLVA--WGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIG 288
+F ++ W L D KA++ AV EW+ ++D + V + + A W E E + R ++Q W++WSKK+PLAKQ Y+SQ+ +LK +G
Sbjct: 77 EFAVNMDAWKKLPDDLKALLHTAVREWTWDQVQRVAVDDLRVVRELAAKGIKAAQWPESEMVKIRALAQRTWEEWSKKTPLAKQAYDSQLAWLKELG 173
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: UPI00167278A5 (TRAP transporter substrate-binding protein n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI00167278A5) HSP 1 Score: 63.9 bits (154), Expect = 7.930e-10 Identity = 34/94 (36.17%), Postives = 57/94 (60.64%), Query Frame = 1
Query: 13 LSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAK--RDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIG 288
++K KW+AL K I+ A+ + + +T M+ E+++ +A AK TL W +++A FRK +Q WQ W+ K+P A+ + +S VKFL +G
Sbjct: 245 INKAKWDALPEHLKRIMQVAMQKLAFQTAMTFEIKNSEAAAKLRAQGVTLHDWSAEDRATFRKAAQTAWQGWADKTPEARALVDSHVKFLTQLG 338
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A537DP50_9PROT (Extracytoplasmic solute receptor protein n=3 Tax=Bacteria TaxID=2 RepID=A0A537DP50_9PROT) HSP 1 Score: 63.2 bits (152), Expect = 1.560e-9 Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 4 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPATLVA--WGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIG 288
+F ++ W L D KA++ AV EW+ ++D + V + + A W E E + R ++Q W++WSKK+PLAKQ Y+SQ+ +LK +G
Sbjct: 260 EFAVNMDAWKKLPDDLKALLHTAVREWTWDQVQRVAVDDLRVVRELAAKGIKAAQWPESEMVKIRALAQRTWEEWSKKTPLAKQAYDSQLAWLKELG 356
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Match: A0A7Y8L3R6_9DELT (TRAP transporter substrate-binding protein DctP n=1 Tax=Syntrophaceae bacterium TaxID=2052184 RepID=A0A7Y8L3R6_9DELT) HSP 1 Score: 62.0 bits (149), Expect = 3.870e-9 Identity = 32/99 (32.32%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 4 DFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVA--KRDPATLVAWGEKEKAEFRKVSQDVWQKWSKKSPLAKQIYESQVKFLKSIGKL 294
+F ++ ++W L AD K I+ +AV E+S ++D +A+ K T ++W E + R+V+Q VW++W+KKSP +++ +S V++LK +G++
Sbjct: 243 EFAVNTQEWEKLPADIKQILKSAVREFSQDMLARVAIDDLRALREMKTTGVTPISWELSEVEKMRRVAQQVWEEWAKKSPNCRKVVDSNVQWLKELGRI 341 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51563.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig51563.1.1 >prot_P-wetherbeei_contig51563.1.1 ID=prot_P-wetherbeei_contig51563.1.1|Name=mRNA_P-wetherbeei_contig51563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp IDFVLSKRKWNALSADQKAIVTAAVDEWSLRTWMSQELEDRKAVAKRDPAback to top mRNA from alignment at P-wetherbeei_contig51563:255..551- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig51563.1.1 ID=mRNA_P-wetherbeei_contig51563.1.1|Name=mRNA_P-wetherbeei_contig51563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig51563:255..551- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig51563:255..551- >mRNA_P-wetherbeei_contig51563.1.1 ID=mRNA_P-wetherbeei_contig51563.1.1|Name=mRNA_P-wetherbeei_contig51563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig51563:255..551- (Phaeothamnion wetherbeei SAG_119_79)back to top |