prot_P-wetherbeei_contig5127.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5127.2.1
Unique Nameprot_P-wetherbeei_contig5127.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length170
Homology
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: D7G486_ECTSI (Mitochondrial TOM complex subunit, Tom40 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G486_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 2.990e-29
Identity = 71/163 (43.56%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    6 YTGATCAGQLQVGKGPHVAASFNQAVTQQLALGADTTVNLEQNVAQSSYGLKYGRDGWFCTGLYNNGTMQAREAQYVRRVVPNRVTLATTLTAPLAKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLE--CQLLPTLSLTLT--GQLNHAEDKHRFGYGV 164
            Y G TC+GQ+ +G GP    S+NQAVT  L++G     +  Q      YG KY    W   G    G      AQY+RRVVP RVTL     A L     +Q ++G+EFQLKQS+ +A+VD  GK+D TLE  C   PTL +TLT    L+H+EDK  FG  +
Sbjct:  279 YHGDTCSGQISLGTGP-TEISYNQAVTPHLSMGGQGQFSSAQQAVGLLYGFKYNTPSWAVLGRLIGGGANVVTAQYLRRVVPGRVTLGAEYQAQLG--AGSQMMVGAEFQLKQSKMSASVDSNGKVDSTLELKCGTFPTLPVTLTISSSLDHSEDKQTFGLAL 438          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: A0A836CIJ7_9STRA (Eukaryotic porin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIJ7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.020e-22
Identity = 55/143 (38.46%), Postives = 80/143 (55.94%), Query Frame = 0
Query:   26 SFNQAVTQQLALGADTTVNLEQNVAQSSYGLKYGRDGWFCTGLYNNGTMQAREAQYVRRVVPNRVTLATTLTAPLAKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQLLPTLSLTLTGQLNHAEDKHRFGYGVHWQL 168
            SFNQA+T +L  G D T + +   A  S G +Y    W    LY  G MQ + A++V      RV L   L     +P ++   +G+EF LKQS+ +  V+G+G +D  +E + LP  S++  GQLNH EDKHRFG+G+   +
Sbjct:  238 SFNQALTARLTAGMDCTYHAQMGDAPISVGGQYQTRDWTGNVLYGPGMMQLQYARHVNE----RVQLGAELALNPLRPQESAVAVGAEFNLKQSKLHFAVNGSGTVDGNIEVRFLPMASVSFAGQLNHVEDKHRFGFGMQMHV 376          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: B8CCD5_THAPS (Tom40-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCD5_THAPS)

HSP 1 Score: 67.4 bits (163), Expect = 2.880e-10
Identity = 49/156 (31.41%), Postives = 78/156 (50.00%), Query Frame = 0
Query:   17 VGKGPHVAASFNQAVTQQLALGADTTVNLEQNVAQSSYGLKYGRDGWFCTGLYNNGTMQAREAQ----YVRRVVPNRVTLATTLTAPLAKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQL---LPTLSLTLTGQLNHAEDKHRFGYGVH 165
            +G G     ++ Q+VT +LA+G +           SSY  KY  +        N+G    R+      Y R + P+RV +  +L    A   ++Q ++G+EF L +S+ N  VDGTG+I  TLE +L     + SL    +L+H +   RFGYG++
Sbjct:  135 MGGGNVFGCNYFQSVTPRLAMGGEGMYIGANGNMMSSYTAKYSFNP------SNSGDGDERQGMLSLNYKRAITPSRVNIGASLECSPATL-ESQVMVGAEFNLTRSKMNVCVDGTGRIQSTLEAKLGREQGSPSLNFAAELDHGKSLMRFGYGLN 283          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: A0A7S3PTN2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTN2_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.120e-9
Identity = 56/202 (27.72%), Postives = 86/202 (42.57%), Query Frame = 0
Query:    3 DFNYTGATCAGQLQVGK---GPHVAASFNQAVTQQLALGADTTVNLEQNVAQSSYGLKYGR-------------------------------DGWFCTGLYNNGTMQAREAQYVRRVVPNRVTLATTLTAPLAKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQL-----LPTLSLTLTGQLNHAEDKHRFGYGVH 165
            + ++ G T  G L+ G    G     ++ Q +TQ+LA+G +           SSY LKY                                   W C  L+   T       Y R V PNRVTL   L   +    ++  +LG+EF L +S+    +DGTGK+  TLE +L     +PTL+ +   +++ A D  +FGYG++
Sbjct:  168 ELDFGGMTWTGNLKYGSMGGGRVYGMNYYQGITQRLAMGGEGMYIAANGNMLSSYTLKYEMPAPAADDELPSSTSSITPEAPPQAQQLENQPSSWMCAQLHP--TQGMFNMHYKRVVTPNRVTLGAELN--MTPTLESTVMLGAEFNLTRSKVALGIDGTGKLQSTLETKLGRVPGVPTLNFS--SEVDFASDSMKFGYGLN 363          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: UPI001CB99D4A (mitochondrial import receptor subunit TOM40-1-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB99D4A)

HSP 1 Score: 64.3 bits (155), Expect = 4.290e-9
Identity = 47/165 (28.48%), Postives = 83/165 (50.30%), Query Frame = 0
Query:    1 MCDFNYTGATCAGQLQVGKGPHVAASFNQAVTQQLALGADTTVNLEQNVAQSSYGLKYGRDGWFCTGLYNNGTMQAREAQYVRRVVPNRVTLATTLTAP-LAKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQLLPTLSLTLTGQLNHAEDKHRFGYGV 164
            M +F+Y G    GQ+Q+G G  V AS+ Q+VT  L+LG +     +   +   Y  +Y  D    +G   +  M A    YV++V   +V+LAT L    +++   A    G ++ L+Q R    +D  G     LE +L   L+  ++ +++H +  ++FG+G+
Sbjct:  146 MFNFDYKGTDYRGQMQLGNGGLVGASYIQSVTPHLSLGGEVFWAGQHRKSGLGYAARYSTDKMVTSGQIASTGMVA--LSYVQKV-SEKVSLATDLMYNYMSRDVTAS--CGYDYVLRQCRLRGKIDSNGCASAFLEERLNMGLNFLVSAEIDHRKKDYKFGFGL 305          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: A0A0J9X9R0_GEOCN (Similar to Saccharomyces cerevisiae YMR203W TOM40 Component of the TOM (Translocase of outer membrane) complex responsible for recognition and initial import steps for all mitochondrially proteins n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9R0_GEOCN)

HSP 1 Score: 61.6 bits (148), Expect = 4.680e-8
Identity = 46/162 (28.40%), Postives = 78/162 (48.15%), Query Frame = 0
Query:   26 SFNQAVTQQLALGADTTVNLEQNVAQS-----SYGLKYGRDGWFC-TGLYNNGTMQAREAQYVRRVVPNRVTLATTLTAPLAKPGQAQF------------LLGSEFQLKQSRFNATVDGTGKIDVTLECQLLPTLSLTLTGQLNHAEDKHRFGYGVHWQLG 169
            S  QA+T +LALG +T  +  Q+VA       S+  +Y    W   T L   G + A    + R+V  ++V         LA P  A               +G++++ +QS F   +D  GK+   LE ++LP +S+T  G+++HA++  R G G+ ++ G
Sbjct:  199 SILQAITPKLALGLETVYSA-QSVAHPPDAAVSFVGRYVSGDWIASTQLQAQGALIA---SFYRKVT-DKVEAGVEANIGLANPQAAMMGGAEGPTVEGTTTIGAKYEFRQSVFRGQIDSNGKVSCLLERRVLPVVSVTFAGEIDHAKNSSRIGLGLQFEAG 355          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: A0A1X6P7L0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7L0_PORUM)

HSP 1 Score: 60.8 bits (146), Expect = 7.240e-8
Identity = 43/167 (25.75%), Postives = 82/167 (49.10%), Query Frame = 0
Query:    3 DFNYTGATCAGQLQVGKGPHVAASFNQAVTQQLALGADTTVNLEQNVAQSSYGLKYGRDGWFCTGLYNNGTMQAREAQYVRRVVPNRVTLATTLTAPLAKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQLLPTLSLTLTGQLNHAEDKHRFGYGVHWQLG 169
            D  + G+     ++VG    +AAS+ Q+VT  +++G      +++  +  +  +KY   G   T      +       Y+RRV P R  LA  +    A+  ++    G  + L+ +     VD  G++  ++E ++ P  S  L+G+++HA  ++RFG+G+  QLG
Sbjct:  148 DVEHRGSDAVSSVKVGNEGTLAASYLQSVTPTVSVGGQGFYQVKEQFSALTAAVKYADGGDLATATV--ASYGPVIVTYMRRVNP-RFALAAEMFVD-ARSRESLVTAGYRYDLRGATVVGQVDSNGRVATSVEEKIAPGFSFLLSGEVDHAAQEYRFGFGL--QLG 308          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: A0A137PAX3_CONC2 (Uncharacterized protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PAX3_CONC2)

HSP 1 Score: 58.2 bits (139), Expect = 6.790e-7
Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = 0
Query:   26 SFNQAVTQQLALGADT-----TVNLEQNVAQSSYGLKYGRDGWFCTGLYNN-GTMQAREAQYVRRVVPNRVTLATTLTAPLAKPGQ-AQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQLLPTLSLTLTGQLNHAEDKHRFGYGV 164
            S  Q+VT  LALGA+      T  +E++    SY  KY       T  +   G +QA    Y  +V  +       L A +A+  + A   LG++F   +S F   +D TG++   LE +L P+L+LTL+G L+H + + +FG G+
Sbjct:  184 SILQSVTPNLALGAEAIFQRPTTEIEES--SISYVAKYATPKSVLTANFQQPGLVQA---SYFHKV-NDMAEFGVELQALVAQGKRDAACTLGAKFDFVKSTFRTQIDTTGRVSAVLEERLAPSLTLTLSGDLDHLKGQSKFGIGL 323          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: A0A7S4QT36_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QT36_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.310e-6
Identity = 55/183 (30.05%), Postives = 81/183 (44.26%), Query Frame = 0
Query:    3 DFNYTGATCAGQLQVGK---GPHVAASFNQAVTQQLALGADTTVNLEQNVAQSSYGLKYGRDG-WFCTGLYNN-----GTMQA--REAQ------YVRRVVPNRVTLATTLTAPLAKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQL---LPTLSLTLTGQLNHAEDKHRFGYGVH 165
            + ++ GAT  G L+ G    G     ++ Q++T     G +           S+Y +KY  +     T L         TM A    AQ      Y R V P RVTL   L    A    A  ++G EF   +S+    VDG+G+I  TLE +L     + SLT   +L+H ++  RFGYG++
Sbjct:  142 ELDFGGATWCGNLKYGSMGGGLVYGCNYIQSITSNWVAGGEGMYISANQSLLSNYMMKYTMEAPTIETSLDKEEEKPTSTMIASYNSAQSLLCFNYKRVVTPKRVTLGAELQCQPASLESA-VMVGGEFAFTRSKVGVVVDGSGRIQSTLETKLGREPGSPSLTFAAELDHGKNVMRFGYGLN 323          
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Match: A0A7S2UAF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAF1_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.120e-5
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   81 YVRRVVPNRVTLATTLT-APLAKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQL--LP-TLSLTLTGQLNHAED 156
            Y R V PNRVTL   L  +P++    +Q  +G+EF+L++S+    VDGTG+I  TLE +L   P + SL    +++HA+D
Sbjct:   26 YKRIVTPNRVTLGAELQCSPVSL--DSQVAIGAEFKLQRSKVCVCVDGTGRIQTTLEAKLGIAPGSPSLNFAAEVDHAKD 103          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5127.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7G486_ECTSI2.990e-2943.56Mitochondrial TOM complex subunit, Tom40 homolog n... [more]
A0A836CIJ7_9STRA1.020e-2238.46Eukaryotic porin-domain-containing protein n=1 Tax... [more]
B8CCD5_THAPS2.880e-1031.41Tom40-like protein (Fragment) n=1 Tax=Thalassiosir... [more]
A0A7S3PTN2_9STRA1.120e-927.72Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
UPI001CB99D4A4.290e-928.48mitochondrial import receptor subunit TOM40-1-like... [more]
A0A0J9X9R0_GEOCN4.680e-828.40Similar to Saccharomyces cerevisiae YMR203W TOM40 ... [more]
A0A1X6P7L0_PORUM7.240e-825.75Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A137PAX3_CONC26.790e-732.19Uncharacterized protein n=1 Tax=Conidiobolus coron... [more]
A0A7S4QT36_9STRA4.310e-630.05Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2UAF1_9STRA2.120e-541.25Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023614Porin domain superfamilyGENE3D2.40.160.10Porincoord: 1..166
e-value: 1.0E-20
score: 76.1
IPR027246Eukaryotic porin/Tom40PFAMPF01459Porin_3coord: 2..161
e-value: 1.3E-18
score: 67.5
IPR037930Tom40PANTHERPTHR10802MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40coord: 1..165
NoneNo IPR availablePANTHERPTHR10802:SF2MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 HOMOLOG 1-RELATEDcoord: 1..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5127contigP-wetherbeei_contig5127:2801..3967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5127.2.1mRNA_P-wetherbeei_contig5127.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5127 2801..3967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5127.2.1 ID=prot_P-wetherbeei_contig5127.2.1|Name=mRNA_P-wetherbeei_contig5127.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp
MCDFNYTGATCAGQLQVGKGPHVAASFNQAVTQQLALGADTTVNLEQNVA
QSSYGLKYGRDGWFCTGLYNNGTMQAREAQYVRRVVPNRVTLATTLTAPL
AKPGQAQFLLGSEFQLKQSRFNATVDGTGKIDVTLECQLLPTLSLTLTGQ
LNHAEDKHRFGYGVHWQLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023614Porin_dom_sf
IPR027246Porin_Euk/Tom40
IPR037930Tom40