prot_P-wetherbeei_contig51186.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig51186.1.1
Unique Nameprot_P-wetherbeei_contig51186.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length102
Homology
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BLAST of mRNA_P-wetherbeei_contig51186.1.1 vs. uniprot
Match: UPI001C2F144E (hypothetical protein n=1 Tax=Mesorhizobium sp. GbtcB19 TaxID=2824764 RepID=UPI001C2F144E)

HSP 1 Score: 49.7 bits (117), Expect = 1.020e-5
Identity = 26/60 (43.33%), Postives = 36/60 (60.00%), Query Frame = 0 
Query:   34 SDIHRVRNFGEDLYRLFRNRNDASMPLEQIDDIQYFVTVKGRRR-VRQITRKIHELLIEH 92
            S IHR+RNFGEDL+R FR      + LE+ID     +T   RRR +++   ++H LL  H
Sbjct:   15 STIHRIRNFGEDLWRSFRESKQVEVDLEEIDRALDEITYLVRRRFLKRSLSEVHHLLKVH 74
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig51186.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001C2F144E1.020e-543.33hypothetical protein n=1 Tax=Mesorhizobium sp. Gbt... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig51186contigP-wetherbeei_contig51186:2..307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig51186.1.1mRNA_P-wetherbeei_contig51186.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig51186 2..307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig51186.1.1 ID=prot_P-wetherbeei_contig51186.1.1|Name=mRNA_P-wetherbeei_contig51186.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=102bp
NGERVRVRGGRLRRSVTSGRQNVAVVIKVVMAHSDIHRVRNFGEDLYRLF
RNRNDASMPLEQIDDIQYFVTVKGRRRVRQITRKIHELLIEHNLMANLSL
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