prot_P-wetherbeei_contig2111.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2111.3.1
Unique Nameprot_P-wetherbeei_contig2111.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length233
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2111.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
NoneNo IPR availableGENE3D2.30.30.380coord: 152..227
e-value: 3.1E-7
score: 32.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..127
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 157..181
e-value: 0.0021
score: 27.3
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 159..178
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 155..184
score: 8.580583
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 155..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2111contigP-wetherbeei_contig2111:3286..3984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2111.3.1mRNA_P-wetherbeei_contig2111.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2111 3286..4287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2111.3.1 ID=prot_P-wetherbeei_contig2111.3.1|Name=mRNA_P-wetherbeei_contig2111.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=233bp
GGPSSSSAVAGSGSAVAATGGREGGEDGAARWGEGDSSDSDSIPALSPRK
PRRPSKPGAAAAATAAAHSATGGRPAGASPPENPGYGEAGVSSAASAAPA
SVAEPGGSAERPLDDGADDGLENDVPMMTAAEAAAAADEAVAAAVAAAVA
AAEETPSGWTCHSCTFFNAGRSRRCDVCEVSKSKGDAAPDAAAAAGRENR
PPMDEAAAKRRKKEKRREKSNRRFMQDDEGYF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf