prot_P-wetherbeei_contig2079.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2079.2.1
Unique Nameprot_P-wetherbeei_contig2079.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length149
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig2079.2.1 vs. uniprot
Match: W1PCB2_AMBTC (Uncharacterized protein n=4 Tax=Amborella trichopoda TaxID=13333 RepID=W1PCB2_AMBTC)

HSP 1 Score: 55.5 bits (132), Expect = 4.630e-6
Identity = 46/162 (28.40%), Postives = 80/162 (49.38%), Query Frame = 0 
Query:    1 GLATLKGLILGKPTARDVCLDAVLRFTLRQEPELQRTAVQLSVNILWPVNPFKATVAGFADEALRSALPDPPPAPATGVAVAVTKPEQALTVVDNDAG---GGDVDDVRGDAAKGVAAG----------AVGSDEEAASRLALYFALCTRSRQKLKNLFLSY 149
            GL+ +  LIL +P  RD+CL+  L+ T+    E++  A++L  N L+P++     +  FA E LRS +       A G +  + +   +   +D+  G   GG +    G A   +++           +  S  EA   ++L+FALCT+ R  L+ +FL+Y
Sbjct:  851 GLSAVWSLILSRPPIRDLCLNIALQSTVHHMEEVRMKAIRLVANKLYPLSFISQKIENFATEMLRSVVNGN----AGGESTNIDRSNLSGGQIDSTEGVPKGGQLLKEAGLATADISSNINDSSSAKTLSSSSISEAQRCMSLFFALCTKKRSLLREIFLNY 1008
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2079.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
W1PCB2_AMBTC4.630e-628.40Uncharacterized protein n=4 Tax=Amborella trichopo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15245SYMPLEKIN-RELATEDcoord: 1..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2079contigP-wetherbeei_contig2079:5580..6140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2079.2.1mRNA_P-wetherbeei_contig2079.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2079 5580..6140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2079.2.1 ID=prot_P-wetherbeei_contig2079.2.1|Name=mRNA_P-wetherbeei_contig2079.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp
GLATLKGLILGKPTARDVCLDAVLRFTLRQEPELQRTAVQLSVNILWPVN
PFKATVAGFADEALRSALPDPPPAPATGVAVAVTKPEQALTVVDNDAGGG
DVDDVRGDAAKGVAAGAVGSDEEAASRLALYFALCTRSRQKLKNLFLSY
back to top