prot_P-wetherbeei_contig20774.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20774.1.1
Unique Nameprot_P-wetherbeei_contig20774.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length226
Homology
BLAST of mRNA_P-wetherbeei_contig20774.1.1 vs. uniprot
Match: A0A836C9J1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9J1_9STRA)

HSP 1 Score: 103 bits (258), Expect = 6.380e-22
Identity = 72/219 (32.88%), Postives = 102/219 (46.58%), Query Frame = 0
Query:    7 QESKPLAVNAKQFVAAMTDQTVLNDARQREGLAELLVSAASSLSMQTPVYALIAALLSQPAAAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGGGGDDAEPAPSFGRLIVDGVCGALTEALVAGAFIRAKMLLRFLGELANVHLVRYSELGDVLAAMSALYVEGDDPAIKQPCRDLVAYCVAAALPWCGPGLYRHWPAGLSRLVDAL 225
            + S+ LA N    +  +    V +   Q   +A L+V AA+SL MQ+PVYAL+ AL +      EG                                            AE    FGRL+VDGVC  L+ AL +GAF+R K+L+RFLGEL + +L+   E G VL ++   YV G+   + QPC D++A  V  AL W GP L+      L  L++ +
Sbjct:   40 ESSESLAKNVVIIIGHLEGHAVFDGGAQMAAVAALMVEAAASLGMQSPVYALMTALCATKGGTPEGEEAKFESEQAAAA-------------------------------AEEKKPFGRLVVDGVCAELSAALKSGAFLRVKLLVRFLGELVSCNLISAQEFGWVLTSLVDSYVCGNG--VLQPCADVIAGIVIVALAWSGPVLHDRRKRVLDELMEKI 225          
BLAST of mRNA_P-wetherbeei_contig20774.1.1 vs. uniprot
Match: D8LFZ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFZ4_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 2.870e-17
Identity = 86/226 (38.05%), Postives = 107/226 (47.35%), Query Frame = 0
Query:    1 RNGWAEQESKPLAVNAKQFVAAMTDQTVLNDARQREGLAELLVSAASSLSMQTPVYALIAALLSQPAAAAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGGGGDDAEPAPSFGRLIVDGVCGALTEALVAGAFIRAKMLLRFLGELANVHLVRYSELGDVLAAMSALYVEGDDPAIKQPCRDLVAYCVAAALPWCGPGLYRHWPAGLSRLVDALR 226
            R+G+A+   +  AV   + ++A   +  L+     E +A LLV AA +LS+QTPVYAL  AL    A + +         XXXXXXXXXXX                       D  E  PSFGRL+VDG C A  EAL  G FIRAK+LLRFLGEL N  LV   E GD+LA + A YV+ +                              W AG S L+D LR
Sbjct:   56 RSGYAKDPPEERAVELARMLSA---RRYLDGGADMEDVATLLVEAAGTLSIQTPVYALTTALCVASAKSPKRSGSREREGXXXXXXXXXXXGNAATARDSMVTDDAA-------DSREDGPSFGRLVVDGCCHAFAEALRKGGFIRAKLLLRFLGELLNCGLVEAQEYGDMLAMLCAGYVKTE-----------------------------AWVAGFSNLMDELR 242          
BLAST of mRNA_P-wetherbeei_contig20774.1.1 vs. uniprot
Match: UPI0003F09D45 (nuclear cap-binding protein subunit 1 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F09D45)

HSP 1 Score: 53.9 bits (128), Expect = 7.910e-5
Identity = 31/90 (34.44%), Postives = 50/90 (55.56%), Query Frame = 0
Query:  122 SFGRLIVDGVCGALTEALVAGAFIRAKMLLRFLGELANVHLVRYSELGDVLAAMSALYVEGDDPAIKQPCRDLVAYCVAAALPWCGPGLY 211
            +FG   V+ +  AL +AL  G F +A++LLRFL +L N H++  + +  +  A  A+  E D P ++    D   Y V ++LPW G  L+
Sbjct:  101 NFGGEFVENIFRALRDALKVGEFEKARILLRFLTDLVNCHVIDLTSMLVMYEAFVAVTSEDDIPQVRS---DWYMYAVMSSLPWIGRELH 187          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20774.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836C9J1_9STRA6.380e-2232.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LFZ4_ECTSI2.870e-1738.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0003F09D457.910e-534.44nuclear cap-binding protein subunit 1 n=1 Tax=Sacc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.180coord: 6..226
e-value: 7.9E-27
score: 96.4
IPR027159Nuclear cap-binding protein subunit 1PANTHERPTHR12412CAP BINDING PROTEINcoord: 31..224
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 32..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20774contigP-wetherbeei_contig20774:258..1191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20774.1.1mRNA_P-wetherbeei_contig20774.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20774 258..1191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20774.1.1 ID=prot_P-wetherbeei_contig20774.1.1|Name=mRNA_P-wetherbeei_contig20774.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp
RNGWAEQESKPLAVNAKQFVAAMTDQTVLNDARQREGLAELLVSAASSLS
MQTPVYALIAALLSQPAAAAEGPVAAAAASGDAAAASGGVAEGKGAAANG
GGSARDGGRGGGGGDDAEPAPSFGRLIVDGVCGALTEALVAGAFIRAKML
LRFLGELANVHLVRYSELGDVLAAMSALYVEGDDPAIKQPCRDLVAYCVA
AALPWCGPGLYRHWPAGLSRLVDALR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027159CBP80
IPR016024ARM-type_fold