prot_P-wetherbeei_contig207.7.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig207.7.1
Unique Nameprot_P-wetherbeei_contig207.7.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length489
Homology
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A497J0Y0_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Korarchaeota archaeon TaxID=2056630 RepID=A0A497J0Y0_9ARCH)

HSP 1 Score: 53.9 bits (128), Expect = 3.230e-5
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
Query:   53 HGHTDVVFSCCFTPDGRFLLSGSADRAVRLWDAATTECVRV 93
             GH   V S  F+PDGRF+LSGS DR +RLWD  T  C+++
Sbjct:    2 EGHESYVTSVSFSPDGRFILSGSDDRTLRLWDCKTGRCIKI 42          
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A2A5FTH3_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2A5FTH3_9FLAO)

HSP 1 Score: 53.5 bits (127), Expect = 3.300e-5
Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   54 GHTDVVFSCCFTPDGRFLLSGSADRAVRLWDAATTECVR 92
            GHT+V+ S CF+PDG++ LSGS D+ ++LW+ AT E +R
Sbjct:    6 GHTEVINSVCFSPDGKYALSGSLDKTLKLWEVATGEEIR 44          
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A1F6LP31_9BACT (Uncharacterized protein n=1 Tax=Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27 TaxID=1817870 RepID=A0A1F6LP31_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 4.230e-5
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0
Query:   54 GHTDVVFSCCFTPDGRFLLSGSADRAVRLWDAATTECVRVMT 95
            GHTD++ S  F+PDGR L SGS DR V+LWD  T  C+R +T
Sbjct:  127 GHTDLINSVAFSPDGRLLASGSMDRTVKLWDVQTNACLRTLT 168          
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: UPI001C9BEF4D (WD40 repeat domain-containing protein n=1 Tax=Actinomadura sp. HBU206391 TaxID=2731692 RepID=UPI001C9BEF4D)

HSP 1 Score: 56.2 bits (134), Expect = 4.820e-5
Identity = 25/34 (73.53%), Postives = 26/34 (76.47%), Query Frame = 0
Query:   54 GHTDVVFSCCFTPDGRFLLSGSADRAVRLWDAAT 87
            GHTDVVFS  F+PDGR   SGS DR VRLWD AT
Sbjct:   50 GHTDVVFSVAFSPDGRIAASGSGDRTVRLWDVAT 83          
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A2J8A5B9_9CHLO (Vegetative incompatibility protein HET-E-1 (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A5B9_9CHLO)

HSP 1 Score: 52.0 bits (123), Expect = 5.300e-5
Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 0
Query:   51 ICHGHTDVVFSCCFTPDGRFLLSGSADRAVRLWDAATTECVRVM 94
            +  GHT  V S  F+PDGR+L SGS D  +RLWD AT +C+ ++
Sbjct:   34 VLKGHTKDVSSVAFSPDGRWLASGSEDSTLRLWDTATGQCIAML 77          
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A2K3DGQ3_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DGQ3_CHLRE)

HSP 1 Score: 57.0 bits (136), Expect = 8.230e-5
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   51 ICHGHTDVVFSCCFTPDGRFLLSGSADRAVRLWDAATTEC 90
            +C GH + V S CF+PDGR L+SGS D+ +R+WDAA+ EC
Sbjct: 1423 VCVGHKNAVTSVCFSPDGRSLVSGSEDKTLRVWDAASGEC 1462          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A497J0Y0_9ARCH3.230e-553.66Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A2A5FTH3_9FLAO3.300e-553.85Uncharacterized protein n=1 Tax=Flavobacteriales b... [more]
A0A1F6LP31_9BACT4.230e-557.14Uncharacterized protein n=1 Tax=Candidatus Lindowb... [more]
UPI001C9BEF4D4.820e-573.53WD40 repeat domain-containing protein n=1 Tax=Acti... [more]
A0A2J8A5B9_9CHLO5.300e-550.00Vegetative incompatibility protein HET-E-1 (Fragme... [more]
A0A2K3DGQ3_CHLRE8.230e-557.50Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 236..250
score: 35.24
coord: 155..169
score: 36.64
coord: 71..85
score: 41.52
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 45..84
e-value: 4.1E-8
score: 43.0
coord: 252..291
e-value: 1.2E-6
score: 38.1
coord: 294..333
e-value: 0.0028
score: 26.9
coord: 210..249
e-value: 1.3E-9
score: 48.0
coord: 87..126
e-value: 4.7E-7
score: 39.4
coord: 171..207
e-value: 40.0
score: 6.9
coord: 129..168
e-value: 9.8E-11
score: 51.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 52..84
e-value: 8.0E-8
score: 32.8
coord: 89..125
e-value: 4.8E-4
score: 20.9
coord: 215..249
e-value: 9.0E-7
score: 29.5
coord: 300..332
e-value: 0.031
score: 15.1
coord: 130..168
e-value: 2.5E-9
score: 37.6
coord: 253..290
e-value: 4.3E-6
score: 27.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 94..135
score: 12.313033
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 259..300
score: 10.976305
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 301..335
score: 11.64467
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 52..93
score: 16.189545
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 217..258
score: 17.192091
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 136..177
score: 15.320672
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 38..196
e-value: 6.3E-47
score: 162.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 197..354
e-value: 2.4E-39
score: 137.1
NoneNo IPR availablePANTHERPTHR42968WD REPEAT-CONTAININGcoord: 279..402
coord: 182..334
coord: 50..293
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 217..254
score: 13.000128
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 301..335
score: 9.731054
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 136..168
score: 12.235586
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 52..84
score: 12.420132
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 94..130
score: 9.203785
NoneNo IPR availableCDDcd00200WD40coord: 54..333
e-value: 1.47089E-80
score: 250.33
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 236..250
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 50..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig207contigP-wetherbeei_contig207:9070..11115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig207.7.1mRNA_P-wetherbeei_contig207.7.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig207 8678..12261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig207.7.1 ID=prot_P-wetherbeei_contig207.7.1|Name=mRNA_P-wetherbeei_contig207.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=489bp
MEVEEPRLPASAAGGSADASASFGILALDVAATAAGPATAVVASVAGTAL
ICHGHTDVVFSCCFTPDGRFLLSGSADRAVRLWDAATTECVRVMTGHLDW
VTAVAAAPGGDEVVSCGADALVIVWRLRDGACLRTLEGHGDMVRSVAVSP
DKRCIVSGGYDRTTRVWDFVTGVCLKVVSDGGSLVEAVACCGQWVLSASE
SALRVYDTETLTVRRVLRGHGHCINAVAVTPDGRRAVTASSDRSVRLWDL
RSGECVKSLTGHQKMVLHVAVSRCGRWAASSSWDSAIVVWRLPSGEAAAV
LENHVQHVNVVEFSPDGRQLAAGTDECLLSVWELERVTAPFFALRWAVVT
ARWHWQRNGDDGSGYGGHGGTWRQQGSAAAAAAAAAAVRKQDKEVAAAAA
AAAPMYAPAHGGGWGAPCEAITPPSPLLSGPPQPPAVVRGGRCAIGNARW
TEFLAAVCALPDPAFQHVVTFMPGVRVRLGGKVLGTTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf