mRNA_P-wetherbeei_contig207.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: D8LIR0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR0_ECTSI) HSP 1 Score: 120 bits (300), Expect = 2.040e-25 Identity = 69/128 (53.91%), Postives = 80/128 (62.50%), Query Frame = 3
Query: 2193 PSPIKVKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGLQAV 2576
P K+ R SAWM FLA RE VR E+PG+ +G MQKILS WKAL E A + AAEDK R + EL AAGLTKLP ++ AG +VLPLARVRK ++LD VGNISKEGL V
Sbjct: 176 PDGSKIARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKALGEAEVARYAKLAAEDKERVKNELAAAGLTKLPTKNSSSAAVAGGPTS-----LVLPLARVRKTVRLDPSVGNISKEGLLLV 298
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A836CK92_9STRA (HMG box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK92_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.200e-22 Identity = 61/124 (49.19%), Postives = 80/124 (64.52%), Query Frame = 3
Query: 2205 KVKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGLQAV 2576
K+KR SAWM FLA R++V NPG IG + K S W A+ P E+ ++A AAEDKAR Q EL+AAGLTKLP AG S D P + I+LPL+RVRK K+D++V +I+ +GL +
Sbjct: 141 KIKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGN-RSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATI 263
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: H3GZX8_PHYRM (HMG box domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZX8_PHYRM) HSP 1 Score: 96.7 bits (239), Expect = 5.020e-19 Identity = 51/123 (41.46%), Postives = 75/123 (60.98%), Query Frame = 3
Query: 2208 VKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGLQAV 2576
VKRPLS++MHF R QV ENPG+ IG++QK++SA+WKAL P ++ + AA+DKAR++ EL P S D++ + PL RVRK+++ D DVG +S++ L A+
Sbjct: 4 VKRPLSSYMHFCNERRRQVMDENPGVRIGQIQKVISAQWKALTPEQKEVYVQIAAKDKARYEQEL-----LDNPQVNDEPSVEQKDSNAC-----IYPLGRVRKMVQCDPDVGKVSRDALLAI 116
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A5D6XPV5_9STRA (HMG box domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPV5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.460e-15 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 3
Query: 2208 VKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGLQAV 2576
VKR LS++M F R++V NPG+ IGE+QK++S +WKAL ER + AA+DK R+ E+ A P A A DA PA S V L RVRK+++ D D G I+++ L A+
Sbjct: 4 VKRALSSYMIFCNDRRKEVADANPGLRIGEIQKLISVQWKALSEQEREHYVQLAAKDKERYAQEVAA-----NPAAAADAEDDGEDA-PAPSSACVYQLGRVRKVVQTDPDAGRINRDALIAI 120
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A1V9ZFH9_9STRA (HMG box domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFH9_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.050e-14 Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 3
Query: 2208 VKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARF---QAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGLQAV 2576
V +P SA+ HFLAA R +V+++NPG IG +QKIL KWK L E+ + A +DK R+ +AEL A G+ P A + LP ARV++II D DV +SK+ L A+
Sbjct: 61 VSKPQSAYFHFLAAKRGEVKADNPGAAIGAIQKILGTKWKELTSEEKEPYIQLALDDKERYAKEKAELLARGIDIEPE----------KTTVASEDVLSLPCARVKRIINADQDVSKVSKDALIAI 176
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A0P1ANA4_PLAHL (Nuclear y ccaat-box binding factor c subunit nf yc n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ANA4_PLAHL) HSP 1 Score: 81.3 bits (199), Expect = 1.310e-13 Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 3
Query: 2202 IKVKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGLQAV 2576
+ VK+P S+++ F R V +ENPG+ IGE+QKI+SAKW L E+ + A +DKAR++ E+ L + +S + PL RVRKI++ D D+G +SK+ L A+
Sbjct: 2 MSVKKPQSSYLIFCNERRRDVMNENPGVRIGEIQKIISAKWNELTTEEKDVYVELANKDKARYKQEI-------LDHPQVDEEINLKEKMAQNSNACIYPLGRVRKIVQSDPDIGKVSKDALIAI 119
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: K3WHB8_GLOUD (HMG box domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHB8_GLOUD) HSP 1 Score: 80.5 bits (197), Expect = 2.830e-13 Identity = 47/123 (38.21%), Postives = 72/123 (58.54%), Query Frame = 3
Query: 2208 VKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGLQAV 2576
+KR LS++M F R+QV ENPG+ IGE+QK++S +WK L E+ + AA+DK R++ E + + + + TGA A A + V L RV+KI+ D +VG +S+E L A+
Sbjct: 4 IKRALSSYMIFCNDRRKQVAEENPGLRIGEIQKLISTQWKELSEQEKEHYVQLAAKDKERYEQEKRD---NPVEVEEANSETGAQMAA-ASATACVYQLGRVKKIVHTDPEVGKVSREALIAI 122
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A8K1FA27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA27_PYTOL) HSP 1 Score: 80.1 bits (196), Expect = 4.160e-13 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 3
Query: 2211 KRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGLQAV 2576
K+P SA+ F A R+ V ENPG+ IGE+QK+++A+WK L E+ + A +DK R++ E K +LP A A G D + + PL RV++II+ D DV +S+E L A+
Sbjct: 5 KKPQSAYFLFAADKRKTVAQENPGLRIGEIQKLITAQWKELSAEEKEHYTTLAVQDKERYERE-KLENPVELPEAN--AQDGVEDEPTGNV--CIYPLGRVKRIIQSDPDVNKVSREALIAI 121
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A1V9ZYX4_9STRA (HMG box domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYX4_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 9.320e-12 Identity = 47/120 (39.17%), Postives = 62/120 (51.67%), Query Frame = 3
Query: 2208 VKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKAAGLTKLPLAGGGASTGAGDAHPAHSGGIVLPLARVRKIIKLDSDVGNISKEGL 2567
V +P SA+ HFLA R QV++ENP IG +QKIL WK L ++ + A DK R+ K L G A ++LPLARV++II+ D DVG ISK+ L
Sbjct: 48 VAKPQSAYFHFLADKRPQVKAENPNATIGALQKILGTLWKELSAEDKEPYIQKALLDKERYA-------KAKERLLERGIDIEPEKPEVASEDILLLPLARVKRIIQADPDVGKISKDAL 160
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Match: A0A7S1UWY8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWY8_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.320e-11 Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 3
Query: 2169 GNANGAPPPSPIKVKRPLSAWMHFLAATREQVRSENPGMPIGEMQKILSAKWKALDPTERATFDATAAEDKARFQAELKA 2408
G G P P KR +SA++ F A REQ R ENPGM G++ K SA +K L P E+AT++A A++DKARF AE+ A
Sbjct: 101 GGRRGKPERDPGAPKRNMSAYLLFQNAMREQFRRENPGMTFGQLAKYTSAMYKCLTPEEKATWEARASQDKARFDAEMAA 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig207.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig207.7.1 >prot_P-wetherbeei_contig207.7.1 ID=prot_P-wetherbeei_contig207.7.1|Name=mRNA_P-wetherbeei_contig207.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=489bp MEVEEPRLPASAAGGSADASASFGILALDVAATAAGPATAVVASVAGTALback to top mRNA from alignment at P-wetherbeei_contig207:8678..12261+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig207.7.1 ID=mRNA_P-wetherbeei_contig207.7.1|Name=mRNA_P-wetherbeei_contig207.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3584bp|location=Sequence derived from alignment at P-wetherbeei_contig207:8678..12261+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig207:8678..12261+ >mRNA_P-wetherbeei_contig207.7.1 ID=mRNA_P-wetherbeei_contig207.7.1|Name=mRNA_P-wetherbeei_contig207.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1467bp|location=Sequence derived from alignment at P-wetherbeei_contig207:8678..12261+ (Phaeothamnion wetherbeei SAG_119_79)back to top |