prot_P-wetherbeei_contig2066.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2066.1.1
Unique Nameprot_P-wetherbeei_contig2066.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length543
Homology
BLAST of mRNA_P-wetherbeei_contig2066.1.1 vs. uniprot
Match: D7G8B3_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B3_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.160e-39
Identity = 146/469 (31.13%), Postives = 206/469 (43.92%), Query Frame = 0
Query:    4 LEAALLSALSGNNVVRLKAEETLRAATAVPGCVRCLASMVAAV------------------------DGHAEPARMMAGVLLQHWVKDLWRAAPEALLPPSDRAEVRGLMLSAMFDPRSARRMRTAAALVVALIATH--DWPQVXXXXXXXXXGELL------------RGDDATP-------------------------SRAYTCSQCLLFMAEKIPMGRIPALFQESFGALLHAAGSATALPRRARRKAVAVVGTLFHSLGTLITVGGEVSLLQLVAPAALPWADLAAVALAAA----GAPGDAD-------------DFALELQILASLLPAVTLFPQAVGP-HLPRLMAPAWALLMQATIHHEAHGVGIGGFGGGYGGYEDES---------YASDGDRLGFEPLVESLVELLTAVAACDDTDMSAAVIPD-SGFPPLVFVALRLAQATPRHTQLWADDPAGFL 381
            ++A L SALS +N VR  AE  L  A    G    LA  +A+                         DG   P R+MAG+LLQH+V+D W  A +A+LP  D+ +VR L L+ M D  + R  R +A+ VVAL+AT   +WP           G+L              G    P                         +RA +C++CL ++ E++PM  +P +FQ++F  L+ A G A  LPR  RR+   +V  LF S+GTL++V GE  LL  +     PW  L +  L +A       GD D             DF +EL+ L + +  +   P  VG  HL +L+ P W LL      HE   +   G   G  G E            YASDG+R G + L+   +ELL A AAC D  +S  +  + +G   L+ V +R  Q       LW D P  F+
Sbjct:    1 MDAVLCSALSADNTVRRGAEAALSYARTQRGFAIALAKQLASNYYPRGAYDGDXXXXXXXXXXXXERDGMWMPMRLMAGMLLQHFVRDQWELADDAVLPAEDKIQVRTLALTTMIDVSAPRAARASASRVVALMATAGGEWPSGWGGLIPSLIGQLAIAAAAVENARAEAGSAEAPRGGVGGRGRAGERAEAAAVAAEHAVARAESCAKCLQYLTEEVPMEHVPEVFQQAFPGLVEA-GKADYLPRSIRRRVFRIVRELFTSIGTLVSVRGETRLLPGLQQCVPPWLHLVSKTLQSAVDGRAIGGDRDKNGXXXXXXXXXXDFGVELEGLRTAMVLLAHVPSTVGDGHLGQLLPPLWQLLTDGRERHEQSMLSSDG--NGEDGDEXXXXXXXXXXXXYASDGERQGLDELIVQSLELLAASAACPDPQVSGLLGGEGAGVGSLLAVVIRYLQLPSESCALWRDSPNEFV 466          
BLAST of mRNA_P-wetherbeei_contig2066.1.1 vs. uniprot
Match: A0A7S3X1K2_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X1K2_EMIHU)

HSP 1 Score: 76.3 bits (186), Expect = 8.860e-11
Identity = 113/416 (27.16%), Postives = 174/416 (41.83%), Query Frame = 0
Query:    2 EALEAALLSALSGNNVVRLKAEETLRAATAVPGCVRCLASMVAAVDGHAEPARMMAGVLLQHWVKDLWRAAPEALLPP----SDRAEVRGLMLSAMFDPRSARRMRTAAALVVALIATHDWPQVXXXXXXXXXGELLRGDDATP-----------SRAYTCSQCLLFMAEKIPMGRIPALFQESFGALLH---AAGSATALPRRARRKAVAVVGTLFHSLGTLITVGGEVSLLQ-LVAPAALPWADLAAVALAAAGAP-------GDADDFALELQILASLLPAVTLFPQAVGPHLPRLMAPAWALL------MQATIHHEAHGVGIGGFGGGYGGYEDESYASDGDRLGFEPLVESLVELLTAVAACDDTDMSAAVIPDSGFPPLVFVALRLAQATPRHTQLWADDPAGFLREDE 385
            +A+ AAL  AL  +  VR  AEE + + +A PG V  L  ++      A  AR +A V+L+++++  W  A     PP     ++A VR  +   + D     R+RTA  + VA IA  DWP            ELLR  +A             + A    +CL   A ++   ++PA  Q     LL     AG   A  ++A R  V V   +   L  L  VG +   LQ L A     W  LA   L    +        G+ +D +L + +L  L   ++ +P ++ P    L+ P  ALL       Q  +  +A  +G            +E   SDG  LG E LV  + ++L A+A+   +     ++P    P L+  A+   Q      Q WADD   +L ++E
Sbjct:   12 QAVFAALCDALLTDLAVRRAAEERVSSLSAQPGFVVSLVEVLLEPQAEAA-ARQLAAVVLKNFLRTHWCEAAVTFTPPLVSDHEKAAVRAALPRGLSD--RVPRIRTAVGVAVATIAQWDWPD----EWPSLMDELLRPLEAAXXXXXXXXXXXXAPAAGALRCLELCASELSEDQLPAATQRLLPLLLQLARGAGGDAASAKQAARS-VRVARRVIERLSLL--VGDDHRQLQRLRAGPVAAWGVLATEQLGQLASRYRVTPPGGEPEDHSLSIALLRLLQLLLSSWPASLPPARCSLLPPLGALLSGALQTFQQRLLCDAASLG------------EEGADSDGSSLGLEALVSHVFDVLAAMAS--SSRHHKLLLP--ALPQLLHGAIAFTQLPVATEQAWADDLQQYLLDEE 401          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2066.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8B3_ECTSI1.160e-3931.13Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S3X1K2_EMIHU8.860e-1127.16Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001494Importin-beta, N-terminal domainPFAMPF03810IBN_Ncoord: 22..94
e-value: 4.5E-6
score: 26.5
IPR001494Importin-beta, N-terminal domainPROSITEPS50166IMPORTIN_B_NTcoord: 22..95
score: 12.494063
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..543
e-value: 1.4E-54
score: 187.6
NoneNo IPR availablePANTHERPTHR10997IMPORTIN-7, 8, 11coord: 7..543
NoneNo IPR availablePANTHERPTHR10997:SF9IMPORTIN-9coord: 7..543
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..543

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2066contigP-wetherbeei_contig2066:2608..4638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2066.1.1mRNA_P-wetherbeei_contig2066.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2066 2608..4638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2066.1.1 ID=prot_P-wetherbeei_contig2066.1.1|Name=mRNA_P-wetherbeei_contig2066.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=543bp
MEALEAALLSALSGNNVVRLKAEETLRAATAVPGCVRCLASMVAAVDGHA
EPARMMAGVLLQHWVKDLWRAAPEALLPPSDRAEVRGLMLSAMFDPRSAR
RMRTAAALVVALIATHDWPQVWPELLPSLLGELLRGDDATPSRAYTCSQC
LLFMAEKIPMGRIPALFQESFGALLHAAGSATALPRRARRKAVAVVGTLF
HSLGTLITVGGEVSLLQLVAPAALPWADLAAVALAAAGAPGDADDFALEL
QILASLLPAVTLFPQAVGPHLPRLMAPAWALLMQATIHHEAHGVGIGGFG
GGYGGYEDESYASDGDRLGFEPLVESLVELLTAVAACDDTDMSAAVIPDS
GFPPLVFVALRLAQATPRHTQLWADDPAGFLREDEEETANSSSIRASAAG
LLRALAERSSAAAAAAVAAACLGLLRDAAAAAGSGGAGGDAAGGGGSGGG
GALAAGAAFKVLRRGAASIGFNLADLQGVLVAAATGNFPLCDSPLVRGRA
LWTAARFVGALTDEQAVTAVAAAVACLRPSCSLPLRLCACRAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001494Importin-beta_N
IPR011989ARM-like
IPR016024ARM-type_fold