prot_P-wetherbeei_contig20636.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20636.1.1
Unique Nameprot_P-wetherbeei_contig20636.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length100
Homology
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BLAST of mRNA_P-wetherbeei_contig20636.1.1 vs. uniprot
Match: A0A0U9HKN3_KLENI (BED-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HKN3_KLENI)

HSP 1 Score: 55.8 bits (133), Expect = 6.660e-7
Identity = 30/92 (32.61%), Postives = 55/92 (59.78%), Query Frame = 0 
Query:   10 ELIKLIPQMRAYRSGVAPFDVTCEGRGRSAAVHAWWIQIEQSPGGDIISKLAIVLLDVVSHAAAPERTFSLLGWLQSERRNRI---TLRLWA 98
            E+ +L+ +M  Y++G  PF +       +  +  WW Q  ++   + ++ LA+++ D+V HA   ER FS++GW+Q+++RNR+   TL L A
Sbjct:  420 EVKQLMHEMVMYKAGEGPFGLVIAPE--TFDLRLWW-QTVRNKQYNTLAALALIIADIVPHAGDIERVFSMMGWMQNDKRNRLGTGTLELMA 508
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20636.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0U9HKN3_KLENI6.660e-732.61BED-type domain-containing protein n=1 Tax=Klebsor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 37..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20636contigP-wetherbeei_contig20636:676..975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20636.1.1mRNA_P-wetherbeei_contig20636.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20636 155..1134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20636.1.1 ID=prot_P-wetherbeei_contig20636.1.1|Name=mRNA_P-wetherbeei_contig20636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp
MHSRRLGAQELIKLIPQMRAYRSGVAPFDVTCEGRGRSAAVHAWWIQIEQ
SPGGDIISKLAIVLLDVVSHAAAPERTFSLLGWLQSERRNRITLRLWAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf