prot_P-wetherbeei_contig20602.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig20602.1.1
Unique Nameprot_P-wetherbeei_contig20602.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length193
Homology
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: A0A7X8XJU2_9BURK (Recombination protein RecR n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XJU2_9BURK)

HSP 1 Score: 231 bits (588), Expect = 3.570e-74
Identity = 116/188 (61.70%), Postives = 144/188 (76.60%), Query Frame = 0
Query:    3 ERLVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDR-FKITRLALGIPLGTDLEYADEVTLGRAFRHR 189
            ERLV  LQR+PT+GPK+A RLA+HL+  P  Q + LA +LL+++  +R C+ C + +D E CA+C D  RD + LCVV   RD+ A+ERTREFRG YHVLGGLI+PL+GIGP ++R + LL RLE E   ELVLAT+PTVAGEATALYL R L  R  +ITRLALG+P+G+DLEYADEVTLGRAF  R
Sbjct:    8 ERLVEELQRLPTVGPKTALRLAFHLLSAPDAQVQALAQSLLDVKSKLRTCSRCGHLSDKELCAVCRDPRRDTSVLCVVATARDLMAVERTREFRGLYHVLGGLISPLDGIGPSELRIQALLDRLEVEKPGELVLATNPTVAGEATALYLFRLLSARNLRITRLALGLPVGSDLEYADEVTLGRAFAGR 195          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: UPI001D01A2F5 (recombination mediator RecR n=1 Tax=Phycicoccus mangrovi TaxID=2840470 RepID=UPI001D01A2F5)

HSP 1 Score: 224 bits (572), Expect = 5.500e-72
Identity = 108/183 (59.02%), Postives = 140/183 (76.50%), Query Frame = 0
Query:   12 MPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDRF--KITRLALGIPLGTDLEYADEVTLGRAFRHRQIL 192
            MP +GPKSAQR+A+HL+Q  P   E LA AL E++  VR CA+C N  +GE C +C+D  RD++++CVV  P+DV AIERTREFRGRYHVLGG I+P++GIGP+ +R RELLARL    + E+++ATDP + GEATA YL R L+D    ++TRLA G+P+G DLEYADEVTLGRAF  R++L
Sbjct:    1 MPGVGPKSAQRIAFHLLQADPADVERLAHALSEVKARVRFCAVCFNVAEGERCRICADPRRDDSSICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGIGPEDLRVRELLARLGDGVVTEVIIATDPNLEGEATASYLSRMLRDIGVQRVTRLASGLPVGGDLEYADEVTLGRAFEGRRLL 183          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: A0A2N3YL60_9MICO (Recombination protein RecR n=7 Tax=Intrasporangiaceae TaxID=85021 RepID=A0A2N3YL60_9MICO)

HSP 1 Score: 224 bits (571), Expect = 1.280e-71
Identity = 108/190 (56.84%), Postives = 140/190 (73.68%), Query Frame = 0
Query:    5 LVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDRF--KITRLALGIPLGTDLEYADEVTLGRAFRHRQIL 192
            L+  L R+P +GPKSAQR+A+HL+Q  P   E LA AL E++  VR C +C N ++ E C +CSD+ RD T +CVV  P+DV AIERTREFRGRYHVLGG I+P++GIGP  ++ RELL RL    + E+++ATDP + GEATA YL R L+D    ++TRLA G+P+G DLEYADEVTLGRAF  R++L
Sbjct:    9 LIDELGRLPGVGPKSAQRIAFHLLQADPADVERLAHALTEVKARVRFCEVCFNVSEAERCRICSDDRRDRTAICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGIGPQDLKVRELLTRLADGTVTEVIIATDPNLEGEATASYLSRMLRDVGVQRVTRLASGLPVGGDLEYADEVTLGRAFEGRRLL 198          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: RECR_STRCO (Recombination protein RecR n=200 Tax=Actinomycetia TaxID=1760 RepID=RECR_STRCO)

HSP 1 Score: 223 bits (568), Expect = 3.530e-71
Identity = 109/189 (57.67%), Postives = 137/189 (72.49%), Query Frame = 0
Query:    5 LVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDR-FKITRLALGIPLGTDLEYADEVTLGRAFRHRQIL 192
            L+  L R+P +GPKSAQR+A+H++Q  P     LA AL+E++  VR CA C N    E C +C D  RD + +CVV  P+DV AIERTREFRGRYHVLGG I+P++G+GPD +R RELLARL    + EL+LATDP + GEATA YL R +K    K+TRLA G+P+G DLEYADEVTLGRAF  R++L
Sbjct:    9 LIDELGRLPGVGPKSAQRIAFHILQAEPVDVRRLAQALMEVKAKVRFCATCGNVAQEEQCNICRDTRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDDLRIRELLARLADGSVTELILATDPNLEGEATATYLARMIKPMGLKVTRLASGLPVGGDLEYADEVTLGRAFEGRRLL 197          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: K6VK54_9MICO (Recombination protein RecR n=2 Tax=Austwickia TaxID=1184606 RepID=K6VK54_9MICO)

HSP 1 Score: 223 bits (568), Expect = 3.530e-71
Identity = 107/189 (56.61%), Postives = 139/189 (73.54%), Query Frame = 0
Query:    5 LVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKD-RFKITRLALGIPLGTDLEYADEVTLGRAFRHRQIL 192
            L+  L R+P +GPKSAQR+A+HL+Q        L D+L+ +++ VR C +C N  +GE C +CSDE RD + +CVV  P+DV AIERTREFRGRYHVLGG INP++GIGPDQ+R  EL ARL    ++E+++ATDP + GEATA YL R L     ++TRLA G+P+G DLEYADEVTLGRAF  R++L
Sbjct:    9 LIDELGRLPGVGPKSAQRIAFHLLQADEEDVRRLVDSLVRVKKQVRFCTVCGNVAEGEKCRICSDERRDGSAICVVEEPKDVLAIERTREFRGRYHVLGGAINPMDGIGPDQLRFSELFARLSDGQVEEVIIATDPNLEGEATAAYLARLLSPLNVRVTRLASGLPVGGDLEYADEVTLGRAFEGRRLL 197          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: J2K272_9ACTN (Recombination protein RecR n=44 Tax=Actinomycetia TaxID=1760 RepID=J2K272_9ACTN)

HSP 1 Score: 223 bits (567), Expect = 5.020e-71
Identity = 108/189 (57.14%), Postives = 138/189 (73.02%), Query Frame = 0
Query:    5 LVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDR-FKITRLALGIPLGTDLEYADEVTLGRAFRHRQIL 192
            L+  L R+P +GPKSAQR+A+H++Q  P     LA+AL+E++  VR C++C N    E C +C D  RD   +CVV  P+DV AIERTREFRGRYHVLGG I+P+EG+GPD +R RELLARL    + EL+LATDP + GEATA YL R +K    ++TRLA G+P+G DLEYADEVTLGRAF  R++L
Sbjct:    9 LIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLANALMEVKAKVRFCSVCGNVAQEEQCRVCLDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLRVTRLASGLPVGGDLEYADEVTLGRAFEGRRLL 197          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: A0A132MI11_9ACTN (Recombination protein RecR n=6 Tax=Actinomycetia TaxID=1760 RepID=A0A132MI11_9ACTN)

HSP 1 Score: 222 bits (566), Expect = 7.120e-71
Identity = 109/189 (57.67%), Postives = 135/189 (71.43%), Query Frame = 0
Query:    5 LVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDR-FKITRLALGIPLGTDLEYADEVTLGRAFRHRQIL 192
            L+  L R+P IGPKSAQR+A+HL+   P     LA  LLE++  VR C  C N  + E C +C D  RD   LCVV  P+DV AIE+TREFRGRYHVLGG I+P+EG+GPD +R RELLARL    ++EL+LATDP + GEATA YL R +K    ++TRLA G+P+G DLEYADEVTLGRAF  R++L
Sbjct:    9 LIDELGRLPGIGPKSAQRIAFHLLNADPADVRRLAQVLLEVKEKVRFCVTCGNVAESEQCRICLDPRRDPAVLCVVEEPKDVVAIEKTREFRGRYHVLGGAISPIEGVGPDDLRIRELLARLADGTVEELILATDPNLEGEATATYLARLVKPMGLRVTRLASGLPVGGDLEYADEVTLGRAFEGRRLL 197          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: A0A6G7XT80_9ACTN (Recombination protein RecR n=1 Tax=Nocardioides sp. HDW12B TaxID=2714939 RepID=A0A6G7XT80_9ACTN)

HSP 1 Score: 222 bits (565), Expect = 1.010e-70
Identity = 108/189 (57.14%), Postives = 140/189 (74.07%), Query Frame = 0
Query:    5 LVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDR-FKITRLALGIPLGTDLEYADEVTLGRAFRHRQIL 192
            L+  L R+P +GPKSAQR+A+HL+Q  P     LA+ L++++  VR CA+C N  + E C +C D  RD T LCVV  P+DV AIERTREFRGRYHVLGG I+P++GIGP+Q+RTREL+ RL    + E++LATDP + GEATA YL R L+D   ++TRLA G+P+G DLEYADEVTLGRAF  R+ +
Sbjct:    9 LIDELGRLPGVGPKSAQRIAFHLLQADPVDVRRLAEILVQVKEKVRFCAVCGNVAEEETCRICRDPRRDATLLCVVEEPKDVVAIERTREFRGRYHVLGGAISPMDGIGPEQLRTRELMTRLADGTVLEVILATDPNLEGEATATYLTRLLRDLGLRVTRLASGLPVGGDLEYADEVTLGRAFEGRRAV 197          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: A0A3N2D975_9MICO (Recombination protein RecR n=2 Tax=Micrococcales TaxID=85006 RepID=A0A3N2D975_9MICO)

HSP 1 Score: 222 bits (565), Expect = 1.110e-70
Identity = 109/186 (58.60%), Postives = 136/186 (73.12%), Query Frame = 0
Query:    5 LVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDR-FKITRLALGIPLGTDLEYADEVTLGRAFRHR 189
            L+A L R+P +GPKSAQR+A++++   P     LA+ALLE++  VR C +C N  +GE C +C D  R+ET LCVV  P+DV AIERTREFRGRYHVLGG INP++GIGPD +R REL++RL    + E++LATDP V GEATA YL R L      +TRLA G+P+G DLEYADEVTLGRAF  R
Sbjct:   12 LIAELGRLPGVGPKSAQRIAFYILNSDPADVSRLANALLEVKAKVRFCEICGNVAEGERCRICEDPRRNETQLCVVEEPKDVVAIERTREFRGRYHVLGGAINPIDGIGPDDLRIRELMSRLASGVVTEVILATDPNVEGEATAAYLSRLLTSMDVAVTRLASGLPVGGDLEYADEVTLGRAFEGR 197          
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Match: A0A0A8ELA3_9ACTN (Recombination protein RecR n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A0A8ELA3_9ACTN)

HSP 1 Score: 221 bits (564), Expect = 1.260e-70
Identity = 108/189 (57.14%), Postives = 137/189 (72.49%), Query Frame = 0
Query:    5 LVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVRNCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYHVLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALYLHRQLKDR-FKITRLALGIPLGTDLEYADEVTLGRAFRHRQIL 192
            L+  L R+P +GPKSAQR+A+H++Q  P     LA+AL+E++  VR C++C N    E C +C D  RD   +CVV  P+DV AIERTREFRGRYHVLGG I+P+EG+GPD +R RELLARL    + EL+LATDP + GEATA YL R +K     +TRLA G+P+G DLEYADEVTLGRAF  R++L
Sbjct:    5 LIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLANALMEVKAKVRFCSVCGNVAQEEQCRVCLDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRELLARLADGTVTELILATDPNLEGEATATYLARMIKPMGLTVTRLASGLPVGGDLEYADEVTLGRAFEGRRLL 193          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20602.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XJU2_9BURK3.570e-7461.70Recombination protein RecR n=1 Tax=Burkholderiales... [more]
UPI001D01A2F55.500e-7259.02recombination mediator RecR n=1 Tax=Phycicoccus ma... [more]
A0A2N3YL60_9MICO1.280e-7156.84Recombination protein RecR n=7 Tax=Intrasporangiac... [more]
RECR_STRCO3.530e-7157.67Recombination protein RecR n=200 Tax=Actinomycetia... [more]
K6VK54_9MICO3.530e-7156.61Recombination protein RecR n=2 Tax=Austwickia TaxI... [more]
J2K272_9ACTN5.020e-7157.14Recombination protein RecR n=44 Tax=Actinomycetia ... [more]
A0A132MI11_9ACTN7.120e-7157.67Recombination protein RecR n=6 Tax=Actinomycetia T... [more]
A0A6G7XT80_9ACTN1.010e-7057.14Recombination protein RecR n=1 Tax=Nocardioides sp... [more]
A0A3N2D975_9MICO1.110e-7058.60Recombination protein RecR n=2 Tax=Micrococcales T... [more]
A0A0A8ELA3_9ACTN1.260e-7057.14Recombination protein RecR n=2 Tax=unclassified St... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006171TOPRIM domainSMARTSM00493toprim5coord: 75..160
e-value: 2.7E-10
score: 50.2
IPR006171TOPRIM domainPFAMPF13662Toprim_4coord: 76..165
e-value: 1.8E-21
score: 76.4
IPR006171TOPRIM domainPROSITEPS50880TOPRIMcoord: 75..169
score: 29.833401
NoneNo IPR availableGENE3D6.10.250.240coord: 165..191
e-value: 4.8E-12
score: 46.8
NoneNo IPR availableGENE3D1.10.8.420RecR Domain 1coord: 2..47
e-value: 8.4E-16
score: 59.5
NoneNo IPR availableGENE3D3.40.1360.10coord: 72..164
e-value: 4.3E-32
score: 111.7
NoneNo IPR availableGENE3D3.30.60.80coord: 49..70
e-value: 6.5E-6
score: 27.5
IPR000093DNA recombination protein RecRTIGRFAMTIGR00615TIGR00615coord: 3..190
e-value: 5.9E-74
score: 245.7
IPR000093DNA recombination protein RecRPANTHERPTHR30446RECOMBINATION PROTEIN RECRcoord: 3..190
IPR000093DNA recombination protein RecRHAMAPMF_00017RecRcoord: 1..192
score: 90.760033
IPR023628Recombination protein RecR, C4-type zinc fingerPFAMPF02132RecRcoord: 34..73
e-value: 2.2E-14
score: 52.7
IPR015967Recombination protein RecR, conserved sitePROSITEPS01300RECRcoord: 52..73
IPR034137RecR, TOPRIM domainCDDcd01025TOPRIM_recRcoord: 75..185
e-value: 3.21902E-57
score: 173.859
IPR023627Recombination protein RecRSUPERFAMILY111304Recombination protein RecRcoord: 3..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20602contigP-wetherbeei_contig20602:388..966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20602.1.1mRNA_P-wetherbeei_contig20602.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig20602 388..966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig20602.1.1 ID=prot_P-wetherbeei_contig20602.1.1|Name=mRNA_P-wetherbeei_contig20602.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp
SAERLVAALQRMPTIGPKSAQRLAYHLMQCPPGQAEELADALLEMRRTVR
NCALCHNFTDGEYCALCSDESRDETTLCVVGLPRDVSAIERTREFRGRYH
VLGGLINPLEGIGPDQVRTRELLARLEREPIQELVLATDPTVAGEATALY
LHRQLKDRFKITRLALGIPLGTDLEYADEVTLGRAFRHRQIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006171TOPRIM_domain
IPR000093DNA_Rcmb_RecR
IPR023628Rcmb_RecR_C4-type_Zn
IPR015967Rcmb_RecR_CS
IPR034137TOPRIM_RecR
IPR023627Rcmb_RecR