prot_P-wetherbeei_contig2009.1.4 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2009.1.4
Unique Nameprot_P-wetherbeei_contig2009.1.4
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length364
Homology
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BLAST of mRNA_P-wetherbeei_contig2009.1.4 vs. uniprot
Match: W7TS73_9STRA (SMI1_KNR4 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TS73_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.230e-8
Identity = 47/150 (31.33%), Postives = 73/150 (48.67%), Query Frame = 0 
Query:   27 GSAPSEHSASAHSALRTVFKTADTAAFVLAFCDPEAWLAFEAVSREHYTAINSSHCWAQNDLGVL------EAAVGAHEKQERKQRYVGYRRAEKRVGEAWERLCRFAPAHRLWTLNPGASHEAITAKEASLKRRFPPEVRASFVIHNGQ 170
            G+A    SA   +A+RT F    T    L+F  P +WL  E   +  ++ I  ++ W   DLG +           A   Q  +  ++  + +  R+  AW  + +FAPA   WTLN G   +A+   E +L    PP++RASF+IH+GQ
Sbjct:   49 GTAQLSFSAFLSAAVRTTFWLDIT----LSFLPPSSWLILECACKLIFSHIKHANAWRCVDLGPIYLHSLPSCLTPADIVQNIRFEFIERKASLWRLRRAWATIEQFAPAGFSWTLNKGIEEDALGRWEYALGCSLPPDLRASFLIHDGQ 194
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2009.1.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
W7TS73_9STRA3.230e-831.33SMI1_KNR4 domain-containing protein n=1 Tax=Nannoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2009contigP-wetherbeei_contig2009:850..2461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2009.1.4mRNA_P-wetherbeei_contig2009.1.4Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2009 260..2513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2009.1.4 ID=prot_P-wetherbeei_contig2009.1.4|Name=mRNA_P-wetherbeei_contig2009.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=364bp
MKILVRTPEGQRQWLESRMSVLRLHEGSAPSEHSASAHSALRTVFKTADT
AAFVLAFCDPEAWLAFEAVSREHYTAINSSHCWAQNDLGVLEAAVGAHEK
QERKQRYVGYRRAEKRVGEAWERLCRFAPAHRLWTLNPGASHEAITAKEA
SLKRRFPPEVRASFVIHNGQWCNDSFSDVGWLSFLKLAHNKARVICLKDL
KNTHVFSAFDIATGWPLVSAVLSLRPFLAAARKPLQSPLPRQSQQGVLQG
HRLLPVEEVVASEDIDGSAAAAAVTAAGTEMKRAAAPSAAAAMEATVGMV
PAAVAVAAAAAAGGSPDRRSLMRLSGWKGNRFIGCDDTGAVFVCMPLFSR
KVAASFAEYLKLR*
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