prot_P-wetherbeei_contig2005.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig2005.4.1
Unique Nameprot_P-wetherbeei_contig2005.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length289
Homology
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: A0A835YNH4_9STRA (RING-CH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH4_9STRA)

HSP 1 Score: 298 bits (762), Expect = 1.760e-88
Identity = 157/225 (69.78%), Postives = 175/225 (77.78%), Query Frame = 0
Query:    1 MEFEGSGLDKRSLSGLVRSVSGNFDRLISTSEGEVPKRRFSKDADSEE---VLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFLADQIL-REDWE 221
            MEF+GS L      G+VRSVSG   RL ST E  + + R + + D EE   VLECRVCRGEPE GRRL+APCLCSGSIMY HEDCL QWL HS K  CELCGH F+FTP+YAPDAP  L  WQV  +CLR+AL  WLP  LR  LAAALWLVVVPLATSWLYR+WIHR+R+LLP  L QR+T ACAW DCVSG IIAAAIILSFLSLMTFADF+ADQIL RE+W+
Sbjct:    1 MEFDGSNL------GMVRSVSGKLLRLPSTDELRLSRVRGASEPDEEEEPEVLECRVCRGEPELGRRLYAPCLCSGSIMYIHEDCLQQWLAHSKKDSCELCGHTFAFTPVYAPDAPALLPAWQVAASCLRRALTLWLPRALRAALAAALWLVVVPLATSWLYRVWIHRSRMLLPAQLMQRMTLACAWGDCVSGAIIAAAIILSFLSLMTFADFIADQILLREEWD 219          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: A0A6H5JWM1_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM1_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 6.130e-83
Identity = 147/240 (61.25%), Postives = 176/240 (73.33%), Query Frame = 0
Query:    1 MEFEGSGLDKRSLSGLVRSVSGNFDRLISTSEGEVPKRR---------------FSKDA-----DSEEVLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFLADQILREDW 220
            MEFEG   D+R+L+ LVR++SG  D LI   +G+ P  +                ++DA       +E  ECRVCRGEPEPGRRL+APCLCSGSIM+THEDCLL+WLQHSGK  CELCG  F FTP+Y P AP  + L+QVL TC RK +++WLP  LRVL+ A LWL+ VP+ TSWLYRIWIHRTRVLLP L  QRL  AC WSDC+SG+I+ AAIILSFLSLMTFADFLADQ+LR+D+
Sbjct:    1 MEFEGE--DQRTLNELVRTLSGRLDLLI---DGDQPPHQRAXXXXXXXXXXASPSAEDARGPSPSEDEPPECRVCRGEPEPGRRLYAPCLCSGSIMHTHEDCLLEWLQHSGKDTCELCGALFRFTPVYDPGAPTCVPLYQVLTTCGRKVMVKWLPLCLRVLMVAGLWLLFVPVCTSWLYRIWIHRTRVLLPQLFLQRLNMACIWSDCISGIIVTAAIILSFLSLMTFADFLADQLLRDDF 235          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: D8LBR1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR1_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 1.400e-82
Identity = 146/240 (60.83%), Postives = 176/240 (73.33%), Query Frame = 0
Query:    1 MEFEGSGLDKRSLSGLVRSVSGNFDRLISTSEGEVPKRR---------------FSKDA-----DSEEVLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFLADQILREDW 220
            MEFEG   D+R+L+ LVR++SG  D LI   +G+ P  +                ++DA       +E  ECRVCRGEPEPGRRL+APCLCSGSIM+THEDCLL+WLQHSGK  CELCG  F FTP+Y   AP+ + L+QVL TC RK +++WLP  LRVL+ A LWL+ VP+ TSWLYRIWIHRTRVLLP L  QRL  AC WSDC+SG+I+ AAIILSFLSLMTFADFLADQ+LR+D+
Sbjct:    1 MEFEGE--DQRTLNELVRTLSGRLDLLI---DGDQPPHQRAXXXXXXXXXXASPSAEDAHGPSPSEDEPPECRVCRGEPEPGRRLYAPCLCSGSIMHTHEDCLLEWLQHSGKDTCELCGALFRFTPVYDAGAPQRVPLYQVLTTCGRKVMVKWLPLCLRVLMVAGLWLLFVPVCTSWLYRIWIHRTRVLLPQLFLQRLNMACIWSDCISGIIVTAAIILSFLSLMTFADFLADQLLRDDF 235          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: A0A7S2RW40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW40_9STRA)

HSP 1 Score: 230 bits (587), Expect = 4.650e-65
Identity = 110/162 (67.90%), Postives = 131/162 (80.86%), Query Frame = 0
Query:   50 LECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFL 211
            LECRVCRG  E GR+LFAPCLCSGSIMY H++CLLQWL+HSGK  CELCGH F F P+YA DAP  L + +++ TCLR+ + +WLPF+LR+LLA +LWL VVPL TSWLYRIWIHR+R  +     QRLT  C WSD +SGLI+AAAI+LSFLSLM+FADFL
Sbjct:   15 LECRVCRGPEEEGRKLFAPCLCSGSIMYCHQECLLQWLKHSGKDRCELCGHQFQFNPVYAEDAPTQLPVHRIVRTCLRRLITDWLPFILRILLATSLWLFVVPLTTSWLYRIWIHRSRAFI-----QRLTMPCIWSDSISGLIVAAAIMLSFLSLMSFADFL 171          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: I2CQM3_NANGC (E3 ubiquitin-protein ligase MARCH6 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQM3_NANGC)

HSP 1 Score: 183 bits (464), Expect = 1.180e-53
Identity = 99/175 (56.57%), Postives = 120/175 (68.57%), Query Frame = 0
Query:   40 FSKDADSEEVLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLT---PACAWSDCVSGLIIAAAIILSFLSLMTFADFL 211
              +D D EE   CRVCR   E    LF PC C+GSI  TH++CLLQWLQHSGK  CELC H F F P+YA DAP  +   QVL  CLRKA+ ++LPFV+R+++ A LWL VVP  TSW+YRIWIHR  +L+P L+ +RL        W+D VSG+II   II SFLSLM+FADFL
Sbjct:   41 LDEDHDEEE---CRVCR---ESNGILFRPCKCAGSIRSTHQECLLQWLQHSGKDSCELCKHKFHFQPVYADDAPTHIPARQVLGRCLRKAVCDYLPFVVRLVIVAVLWLGVVPCTTSWIYRIWIHRASLLVPDLIRRRLHGEGSGMLWNDAVSGIIIVGFIIFSFLSLMSFADFL 209          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: A0A2P4YC57_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YC57_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.280e-53
Identity = 98/184 (53.26%), Postives = 124/184 (67.39%), Query Frame = 0
Query:   45 DSEEVLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFLADQILREDWEEEEAEDL 228
            D E+  ECRVCRGE EP RRLFAPC CSGSI +TH DCL QWL+HSGK+ CELCGH F+FTP+Y  +AP+ L   ++L T LR  LL+WLPF LR +L   LWL V P  TSWLYR+W+ R   ++     +R       +D  SG+I+   I+ SFL+LM+FADFL   +  +  EEE AED+
Sbjct:   22 DDEDEAECRVCRGEAEPDRRLFAPCKCSGSIRFTHSDCLEQWLEHSGKSFCELCGHEFTFTPLYDANAPDVLPWTELLTTGLRVVLLKWLPFALRAVLVFVLWLAVAPWCTSWLYRMWLLRASAMVNVNFSERFDAPHIVADIFSGVILIVCIVFSFLALMSFADFLRFHL--DHIEEEIAEDV 203          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: A0A3M6VPX7_9STRA (RING-CH-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPX7_9STRA)

HSP 1 Score: 192 bits (488), Expect = 9.170e-52
Identity = 96/172 (55.81%), Postives = 122/172 (70.93%), Query Frame = 0
Query:   40 FSKDADSEEVLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFL 211
            F+++ + E+  ECRVCRGE EP RRLFAPC CSGSI YTH DCL QWL HSGK+ CELCGH F+FTP+Y  +AP+TL   ++L T LR  LL+WLPF LRV+L   LWL V P  TSWLYR+W+ R   ++     +R   +   +D  SGL++  +II SFL+LM+FADFL
Sbjct:   23 FNEEVEEEDEEECRVCRGEAEPDRRLFAPCKCSGSIRYTHSDCLDQWLTHSGKSFCELCGHEFTFTPLYDANAPDTLPWTELLGTGLRVLLLKWLPFALRVVLVLLLWLAVAPWCTSWLYRMWLLRASAMVNVNFLERFDASHIVTDIFSGLVLIVSIIFSFLALMSFADFL 194          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: D0RMI7_PHYIT (RING-CH-type domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMI7_PHYIT)

HSP 1 Score: 182 bits (463), Expect = 4.020e-51
Identity = 90/167 (53.89%), Postives = 114/167 (68.26%), Query Frame = 0
Query:   45 DSEEVLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFL 211
            + E+  ECRVCRGE EP RRLFAPC CSGSI +TH DCL QWL+HSGK+ CELCGH F+FTP+Y  +AP+ L   ++L T LR  LL+W PF LR +L   LWL V P  TSWLYR+W+ R   ++     +R       +D  SG+I+   I+ SFL+LM+FADFL
Sbjct:   13 EDEDEAECRVCRGEAEPDRRLFAPCKCSGSIRFTHSDCLEQWLEHSGKSFCELCGHQFTFTPLYDANAPDVLPWTELLGTGLRVVLLKWFPFALRAVLVLVLWLAVAPWCTSWLYRMWLLRASAMVNVNFSERFDAPHIVTDIFSGVILIVCIVFSFLALMSFADFL 179          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: G4YP00_PHYSP (RING-CH-type domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4YP00_PHYSP)

HSP 1 Score: 190 bits (483), Expect = 4.320e-51
Identity = 96/176 (54.55%), Postives = 119/176 (67.61%), Query Frame = 0
Query:   36 PKRRFSKDADSEEVLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFL 211
            P   F+ D D +E  ECRVCRGE EPGRRLFAPC CSGSI +TH DCL QWL+HSGK+ CELCGH F+FTP+Y  +AP+ L   ++L T LR  LL+WLPF LR  L   LWL V P  TSWLYR+W+ R   ++     +R       +D  SG+I+   I+ SFL+LM+FADFL
Sbjct:   20 PSSAFAGDEDEDEA-ECRVCRGEAEPGRRLFAPCKCSGSIRFTHSDCLEQWLEHSGKSFCELCGHEFTFTPLYDANAPDVLPWTELLTTGLRVVLLKWLPFALRAALVLVLWLAVAPWCTSWLYRMWLLRASAMVNVNFSERFDAPRIVADIFSGVILIVCIVFSFLALMSFADFL 194          
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Match: A0A225X148_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X148_9STRA)

HSP 1 Score: 190 bits (482), Expect = 5.770e-51
Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = 0
Query:   45 DSEEVLECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGHCFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVVVPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILSFLSLMTFADFL 211
            D E+  ECRVCRGE EP RRLFAPC CSGSI +TH DCL QWL+HSGK+ CELCGH F+FTP+Y  DAP+ L   ++L T LR  LL+WLPF LR  L  ALWL V P  TSWLYR+W+ R   ++     +R   +   +D  SG+I+   I+ SFL+LM+FADFL
Sbjct:   19 DDEDEAECRVCRGEAEPDRRLFAPCKCSGSIRFTHSDCLEQWLEHSGKSFCELCGHEFAFTPLYDADAPDVLPWTELLTTGLRVVLLKWLPFALRAALVLALWLAVAPWCTSWLYRMWLLRASAMVNVNFSERFDASHIVADIFSGVILIVCIVFSFLALMSFADFL 185          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2005.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNH4_9STRA1.760e-8869.78RING-CH-type domain-containing protein n=1 Tax=Tri... [more]
A0A6H5JWM1_9PHAE6.130e-8361.25RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
D8LBR1_ECTSI1.400e-8260.83RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
A0A7S2RW40_9STRA4.650e-6567.90Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
I2CQM3_NANGC1.180e-5356.57E3 ubiquitin-protein ligase MARCH6 (Fragment) n=1 ... [more]
A0A2P4YC57_9STRA2.280e-5353.26E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Phy... [more]
A0A3M6VPX7_9STRA9.170e-5255.81RING-CH-type domain-containing protein n=2 Tax=Per... [more]
D0RMI7_PHYIT4.020e-5153.89RING-CH-type domain-containing protein n=1 Tax=Phy... [more]
G4YP00_PHYSP4.320e-5154.55RING-CH-type domain-containing protein n=8 Tax=Phy... [more]
A0A225X148_9STRA5.770e-5156.29E3 ubiquitin-protein ligase n=1 Tax=Phytophthora m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 51..99
e-value: 6.2E-16
score: 68.9
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 52..98
e-value: 3.4E-13
score: 49.5
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 44..105
score: 20.528173
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 37..110
e-value: 1.8E-18
score: 67.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..247
NoneNo IPR availablePANTHERPTHR13145SSM4 PROTEINcoord: 45..260
NoneNo IPR availableCDDcd16702RING_CH-C4HC3_MARCH6coord: 51..100
e-value: 4.62848E-27
score: 98.1048
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 47..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2005contigP-wetherbeei_contig2005:3638..4751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2005.4.1mRNA_P-wetherbeei_contig2005.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig2005 3461..4751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig2005.4.1 ID=prot_P-wetherbeei_contig2005.4.1|Name=mRNA_P-wetherbeei_contig2005.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp
MEFEGSGLDKRSLSGLVRSVSGNFDRLISTSEGEVPKRRFSKDADSEEVL
ECRVCRGEPEPGRRLFAPCLCSGSIMYTHEDCLLQWLQHSGKAVCELCGH
CFSFTPIYAPDAPETLALWQVLLTCLRKALLEWLPFVLRVLLAAALWLVV
VPLATSWLYRIWIHRTRVLLPHLLYQRLTPACAWSDCVSGLIIAAAIILS
FLSLMTFADFLADQILREDWEEEEAEDLYGEPAEDGDPLPQPAARGEVAA
GGAAAAAAAALEAERPAGGVAAAAAESLEAQPPAAVAVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD