prot_P-wetherbeei_contig1997.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1997.2.1
Unique Nameprot_P-wetherbeei_contig1997.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length1172
Homology
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: A0A836C8Y3_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y3_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 8.420e-10
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0
Query:  875 KCDARKRLLFLRPPRVLVVHLKRLHLRSKITRHVNFPEVLDLRPYCWRDPSTATA 929
            + DA+KRLL LRPPRVLV HLKRL    K   HV  PE+LD  PYCWRDP++A+A
Sbjct:  599 RADAQKRLLILRPPRVLVCHLKRLRPHRKSPLHVRAPEILDASPYCWRDPASASA 653          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: X6NF64_RETFI (USP domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NF64_RETFI)

HSP 1 Score: 64.7 bits (156), Expect = 3.980e-7
Identity = 32/61 (52.46%), Postives = 39/61 (63.93%), Query Frame = 0
Query: 1109 YHLFGVIVHQGGHSSGHYVAYCRGPE------GWSFLSDSVSRRCTLNDVLSSQAYMLFYE 1163
            Y+L  VIVH GG +SGHY  Y R         GW  +SD ++  CTL DVLSS+AYMLFY+
Sbjct:  285 YYLTAVIVHHGGVNSGHYTVYRRATNNSDPNSGWVHVSDELAVSCTLRDVLSSEAYMLFYQ 345          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: M4BDK1_HYAAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDK1_HYAAE)

HSP 1 Score: 65.1 bits (157), Expect = 5.160e-7
Identity = 33/58 (56.90%), Postives = 37/58 (63.79%), Query Frame = 0
Query: 1109 YHLFGVIVHQGGHSSGHYVAYCR-GPEGWSFLSDSVSRRCTLNDVLSSQAYMLFYERK 1165
            Y L  VI+H G   SGH+ AY R GP  W F+SD   R   + DVLSS AYMLFYERK
Sbjct:  376 YDLAAVILHHGNERSGHFTAYRRTGPSQWFFVSDETIREVPVTDVLSSCAYMLFYERK 433          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: A0A0B6YQU7_9EUPU (USP domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YQU7_9EUPU)

HSP 1 Score: 58.2 bits (139), Expect = 5.210e-7
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
Query: 1109 YHLFGVIVHQGGHSSGHYVAYCRGPEG--WSFLSDSVSRRCTLNDVLSSQAYMLFYE 1163
            Y L+ V  H GG SSGHY AYC+ P    W F +D+       N V+SS+AY+LFYE
Sbjct:    8 YDLYAVSNHSGGTSSGHYTAYCKNPYSGDWYFFNDARVSSTRSNQVVSSEAYVLFYE 64          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: A0A8C8SC62_9SAUR (USP domain-containing protein n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8SC62_9SAUR)

HSP 1 Score: 58.2 bits (139), Expect = 1.490e-6
Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 0
Query: 1109 YHLFGVIVHQGGHSSGHYVAYCRGPEG----------WSFLSDSVSRRCTLNDVLSSQAYMLFYER 1164
            Y L  V+VH G   SGH+V Y R P            W ++SD   R+ +L +VLSS AY+LFYER
Sbjct:   25 YRLMAVVVHHGDMHSGHFVTYRRSPPSPKSPLAVSNQWLWVSDDTVRKASLQEVLSSSAYLLFYER 90          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: UPI000E6F48F3 (ubiquitin carboxyl-terminal hydrolase 19-like n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F48F3)

HSP 1 Score: 61.2 bits (147), Expect = 1.980e-6
Identity = 32/68 (47.06%), Postives = 39/68 (57.35%), Query Frame = 0
Query: 1109 YHLFGVIVHQGGHSSGHYVAYCRGPEG-----------WSFLSDSVSRRCTLNDVLSSQAYMLFYERK 1165
            YHL GV+VH+G   +GH  AY RG +            W  L+DSV    +L  VL SQAYMLFYE+K
Sbjct:  107 YHLIGVVVHEGSVDTGHCFAYVRGDKTVGSEEDNKDFTWYCLNDSVVHEVSLQQVLESQAYMLFYEKK 174          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: A0A8J5FHX7_ZINOF (Ubiquitinyl hydrolase 1 n=5 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FHX7_ZINOF)

HSP 1 Score: 63.9 bits (154), Expect = 1.990e-6
Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 0
Query: 1109 YHLFGVIVHQGGHSSGHYVAYCRGPEG------------WSFLSDSVSRRCTLNDVLSSQAYMLFYER 1164
            Y LFGV+VH GG S GHY+AY RG               W + SD+  R   L++VL S+AY+LFYE+
Sbjct:  978 YSLFGVVVHSGGMSGGHYIAYVRGQRNSGKARKDVNSSSWFYASDAHIREAALSEVLQSEAYILFYEK 1045          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: A0A2K1IZ57_PHYPA (Ubiquitinyl hydrolase 1 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IZ57_PHYPA)

HSP 1 Score: 63.9 bits (154), Expect = 2.090e-6
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0
Query: 1106 DGNYHLFGVIVHQGGHSSGHYVAYCRGP-----EG---WSFLSDSVSRRCTLNDVLSSQAYMLFYERKGWSR 1169
            DG Y L G + H G    GHYVAY +G      EG   W ++SDS  R+ +L+DVL S+AY+LFYER+ + +
Sbjct: 1146 DGVYQLIGTVEHSGTMRGGHYVAYVKGESEDSTEGKSTWYYISDSHVRKTSLDDVLQSEAYLLFYERRAFDQ 1217          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: A9U2A7_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U2A7_PHYPA)

HSP 1 Score: 62.0 bits (149), Expect = 2.500e-6
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 0
Query: 1106 DGNYHLFGVIVHQGGHSSGHYVAYCRGP-----EG---WSFLSDSVSRRCTLNDVLSSQAYMLFYER 1164
            DG Y L G + H G    GHYVAY +G      EG   W ++SDS  R+ +L+DVL S+AY+LFYER
Sbjct:  258 DGVYQLIGTVEHSGTMRGGHYVAYVKGESEDSTEGKSTWYYISDSHVRKTSLDDVLQSEAYLLFYER 324          
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Match: A0A8J1XN59_OWEFU (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XN59_OWEFU)

HSP 1 Score: 62.8 bits (151), Expect = 2.730e-6
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0
Query: 1101 GNSGPDGNYHLFGVIVHQGGHSSGHYVAYCRGP----EGWSFLSDSVSRRCTLNDVLSSQAYMLFYER 1164
            GNS     Y L  V+VH GG  SGH++ Y R P      W + SDS+ +R TL +V+ S+AYMLFYE+
Sbjct:  403 GNSNHSDMYKLVSVVVHLGGVESGHFITYRRAPGEYSHKWLYTSDSMVKRVTLQEVMESEAYMLFYEK 470          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1997.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8Y3_9STRA8.420e-1063.64USP domain-containing protein n=1 Tax=Tribonema mi... [more]
X6NF64_RETFI3.980e-752.46USP domain-containing protein n=1 Tax=Reticulomyxa... [more]
M4BDK1_HYAAE5.160e-756.90Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hyal... [more]
A0A0B6YQU7_9EUPU5.210e-749.12USP domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A8C8SC62_9SAUR1.490e-643.94USP domain-containing protein n=1 Tax=Pelusios cas... [more]
UPI000E6F48F31.980e-647.06ubiquitin carboxyl-terminal hydrolase 19-like n=1 ... [more]
A0A8J5FHX7_ZINOF1.990e-645.59Ubiquitinyl hydrolase 1 n=5 Tax=Zingiber officinal... [more]
A0A2K1IZ57_PHYPA2.090e-645.83Ubiquitinyl hydrolase 1 n=1 Tax=Physcomitrium pate... [more]
A9U2A7_PHYPA2.500e-649.25Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
A0A8J1XN59_OWEFU2.730e-647.06Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Owen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 837..1162
e-value: 1.2E-21
score: 77.4
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 843..1170
e-value: 7.4E-33
score: 115.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..838
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 803..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1082..1102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 501..538
NoneNo IPR availablePANTHERPTHR24006:SF781UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 1coord: 1108..1164
coord: 527..919
NoneNo IPR availablePANTHERPTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 527..919
NoneNo IPR availablePANTHERPTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 1108..1164
NoneNo IPR availableCDDcd02257Peptidase_C19coord: 1092..1163
e-value: 8.99266E-16
score: 76.753
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 1109..1126
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 876..1165
score: 17.000048
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 544..1166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1997contigP-wetherbeei_contig1997:2127..5642 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1997.2.1mRNA_P-wetherbeei_contig1997.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1997 1915..6091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1997.2.1 ID=prot_P-wetherbeei_contig1997.2.1|Name=mRNA_P-wetherbeei_contig1997.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1172bp
MAAAAGAGGGRGRGQHGNVAGFAGKPAHRMHKEREGAKEKGLPAVSAEDI
EAAVAKGSFSKKHAKRLARMAKSTAAKGGAASGVGSRSGGGDGGNGDGHR
ADEENAKVHGAPAEGAAAAAAAAAAAATMMAAMVAEAAAMASTANERGAA
GGEGGDAVADTSSAATNDGAVAAEGGSTAAAATSEVSDAALSGDGSDRTV
AATARATIAATDSADDDGSPASSGGAGGRTDREDSGGSEIDSGGGGGDAG
KGDGSKCNGPCRGRDATRRQLVGGREAAPVASISLSSRSAKGTKAGAGDK
VTAAADDNSRSPGAGPSSAGDTGTIAGARERCDMLTSVADPVREVVDEAV
LRCLAAIGPPTPPLTPPLVLLPASGSNAPRRPSWAAITVGGGPPPVPAAA
ASAVAAATTAAPSAAVPTKRALVSSAAVERAKPDSSAVKLSLAGKTKTKM
KAAAAAATAVEASESAAAPLTLTGDSIADASEQSPAAAAAGSSATMPMLS
AAVPAKDELSSDPLQLLQEPERRAGAAAGGSSGGGGSSGSSGGGLDLYTC
MDAFTQEEWLLAKTGDGYACERCNARLTVSAIPQPAEVLAAGEIAVAAVT
ELAAASGRGKECEGAEEQKKTEPPAATAVATAAAVATAAAAMITAEEAPA
VVDAEAEGTTVPVVPAVTPYSPAEEVLEPPSCIAATAPAGNALDSAEAPA
GGVAAAAVRRASASMEDGVVEGSASSAEVGRQAASGALPADDDLRPTYSD
GATLAVEEAPQEEPATRSVEAAGSVETASPTAAAAAARSGVEADADADDG
GIINLSVDDDDGDDEGDEQKAQVEGSPPSTPLEAAVGMSKAAALPAAAAS
KKESTVEAASAGKEEAKKKPPAPLKCDARKRLLFLRPPRVLVVHLKRLHL
RSKITRHVNFPEVLDLRPYCWRDPSTATATPAMSSSPPVSPSPEREVASA
ASEPVCVEAAACAAPELVVAAAAAATVGSEAADTAAAQPMATAKDAVELM
SIDDAARSTVAVANKTAEQAAAAGNGLVRDEIAASLKSTEVASASTAAFL
NAVVTILPETTAPAPAAAPSAAPTADGGGGAGGGSCSGGSGDKSDPDGSC
GNSGPDGNYHLFGVIVHQGGHSSGHYVAYCRGPEGWSFLSDSVSRRCTLN
DVLSSQAYMLFYERKGWSRQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf