prot_P-wetherbeei_contig19812.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19812.1.1
Unique Nameprot_P-wetherbeei_contig19812.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length176
Homology
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A7X9KIX2_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KIX2_9ACTN)

HSP 1 Score: 81.6 bits (200), Expect = 8.110e-15
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0
Query:   69 LAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGP--STHTVQAGDSYWAVSEHHLDEELHREATNREVLEYVHRMMDQNAPLLHHRDPALIIPGEVL 172
            L  RI+E+N GR    G +   G +   G ++ +P     P P    H V AGDSYW +++ HL   L R+AT  EVL+Y   +M  N PLL HR+PALIIPGE++
Sbjct:  185 LRDRIIELNAGR-FGPGGQQWQGGVFPAGMEVVLPQEQAVPTPLGPAHAVIAGDSYWEIADDHLSTALARQATPAEVLDYTLDLMSYNHPLLGHREPALIIPGELV 289          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A812JVD8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JVD8_9DINO)

HSP 1 Score: 75.5 bits (184), Expect = 1.160e-12
Identity = 48/126 (38.10%), Postives = 67/126 (53.17%), Query Frame = 0
Query:   14 PALAVAPAISISHEATVSSVPQTLAPVGHTVE--VVRAGDSVWSIAERVAGGGD--VSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPST-----HTVQAGDSYWAVSEHHL 130
            P +A APA+  + EA  +  P+  AP         VR GDSV+ IAER+AG     +S LA  I+++NLG+ M DG  F   A I+ GW L +P   P P   T     H V  G++ W+++E  L
Sbjct:  531 PTVAAAPAVGGNVEA--APAPERSAPASDATGSYTVRPGDSVYGIAERLAGPDQAAISALANGILDLNLGQRMVDGQMFSNAAYIDVGWVLQLPPGTPSPSSDTVTAAAHVVDEGETLWSIAEDEL 654          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: UPI0011612A98 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. CB02009 TaxID=1703938 RepID=UPI0011612A98)

HSP 1 Score: 73.9 bits (180), Expect = 2.860e-12
Identity = 56/145 (38.62%), Postives = 76/145 (52.41%), Query Frame = 0
Query:   42 HTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVP------ANAPPPGPS--THTVQAGDSYWAVSEHHLDEELHREATNREVLEYVHRMMDQNAPLLH---HRDPALIIPGEVLQFP 175
            +TV   R  +S+WSIAE+V G G+   L  +I + N GR M DG+ F   A I+PGW L +P      A A P  PS  ++TVQ GD+ W V+E    EEL       E+ E      ++ AP        +P LI+PG+VL  P
Sbjct:  171 YTVRDARPAESLWSIAEKVYGHGE---LYTKIADANEGRQMTDGSTFHADAPIQPGWILALPEAPTTQAPAAPSQPSGGSYTVQGGDTLWNVAE----EELGDGERYGELFE-----ANKGAPTPDGGTFDNPDLIVPGQVLDLP 303          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A2G6KFH6_9ACTN (LysM domain-containing protein n=1 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A2G6KFH6_9ACTN)

HSP 1 Score: 72.4 bits (176), Expect = 1.330e-11
Identity = 55/141 (39.01%), Postives = 72/141 (51.06%), Query Frame = 0
Query:   46 VVRAGDSVWSIAERVAGGGDVSV--LAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVP-----ANAP---PPGPSTHTVQAGDSYWAVSEHHLDEELHREATNREVLEYVH-RMMDQNAPLLHHRDPALIIPGEVLQFP 175
            VVR+GDS++ IA+R+AG    ++   A  I+E NLGR M DG RFV  A I+ GW L +P     A AP   P GP  H V  G+S W+++     + L      RE+ +    R  D    L    DP LI PG  L  P
Sbjct:  303 VVRSGDSIYGIAQRLAGPDAKAIDRFASAIIEANLGREMGDGQRFVNAAFIDVGWVLQLPPLPSLAQAPTLAPVGP-VHLVTEGESLWSIAA----DRLGAGERWREIFDLNQSRQFDDGRQL---DDPDLIHPGWELYLP 435          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A4R7HW13_9ACTN (Two-component SAPR family response regulator n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7HW13_9ACTN)

HSP 1 Score: 72.0 bits (175), Expect = 1.790e-11
Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 0
Query:   47 VRAGDSVWSIAERVAGG--GDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPST-----HTVQAGDSYWAVSEHHL 130
            VR GDSV+ IAER+AG     +S LA  I+++NLG+ M DG  F   A I+ GW L +P   P P   T     H V  G++ W+++E  L
Sbjct:  206 VRPGDSVYGIAERLAGPDQASISALANSILDLNLGQRMVDGQMFSNAAYIDVGWVLQLPPGTPSPSSDTVTAAAHVVDEGETLWSIAEDEL 296          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: UPI0018F72F85 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. N35 TaxID=2795730 RepID=UPI0018F72F85)

HSP 1 Score: 71.6 bits (174), Expect = 2.460e-11
Identity = 57/158 (36.08%), Postives = 73/158 (46.20%), Query Frame = 0
Query:   39 PVGHTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPSTHTVQAG------DSYWAVSEHH-------------LDEELHREATNREVLEYVHRMMDQNAPLLH-HRDPALIIPGEVLQFPP 176
            P  +TV+  R  +S+WSIAE++ G G++  L   +V+ N GRTM DG RFV  A I PGWQL +PA+ P    S  + Q G      D   A  EH              LDE  +  A      E       +  P  H   DP LI PG+ L  PP
Sbjct:  173 PPTYTVQDARPAESLWSIAEKLYGRGELYTL---LVDANEGRTMVDGQRFVAEAPIRPGWQLALPADVPLAEESRISAQGGSVSVTADDVPAGGEHERVVAPGDSLSGIALDETGNAHAWP----ELFEENQGEEQPYGHTFTDPDLIYPGQKLTLPP 323          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A3R9WCL2_9ACTN (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. WAC01280 TaxID=2487424 RepID=A0A3R9WCL2_9ACTN)

HSP 1 Score: 70.1 bits (170), Expect = 8.330e-11
Identity = 48/128 (37.50%), Postives = 66/128 (51.56%), Query Frame = 0
Query:   14 PALAVAPAISISHEATVSSVPQTLAPVGHTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVP-----------ANAPPPGPSTHTVQAGDSYWAVSEHHL 130
            P  A APA    H A  +   +T A   +TV+  R  +S+WSIAE++ G G+   L  +I + N GR M DG+ F   A I PGW L +P           A +   GP+ +TVQ GD+ W V+E  L
Sbjct:  144 PDAAAAPA---EHSAQTTGTERTAART-YTVQDARPAESLWSIAEKLYGHGE---LYTKIADANEGRRMADGSVFRADAPIHPGWILTLPDAPATRTDDPDAPSRQAGPAAYTVQGGDTLWKVAEEEL 264          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: A0A6N2DFZ4_9ACTN (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DFZ4_9ACTN)

HSP 1 Score: 69.3 bits (168), Expect = 1.530e-10
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:   47 VRAGDSVWSIAERVAGGGDVSV--LAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPSTHTVQAGDSYWA 124
            V  GDSV++IAER+AG    S   +A+ I+++NLG  M DG RF   A IEPGW L++P +A     S H+  AG + W+
Sbjct:  192 VAPGDSVYAIAERLAGADRSSTVSIAEEILDLNLGAVMPDGQRFTNAAYIEPGWVLHLPVSASGTIDSAHSRSAGANGWS 271          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: UPI00165C69A9 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Streptomyces sp. TRM68367 TaxID=2758415 RepID=UPI00165C69A9)

HSP 1 Score: 63.5 bits (153), Expect = 1.210e-8
Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 0
Query:   42 HTVEVVRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVP--------------ANAPPPGPSTHTVQAGDSYWAVSEHHLDEELH 135
            +TV+  R  +S+WSIAE++ G G+   L  +I + N G  M DG+ F     I+PGW L +P              A A   G  ++TV AGD+ W ++E  L +  H
Sbjct:  177 YTVQDARPAESLWSIAEKLYGHGE---LYTKIADANEGHQMADGSVFHANEPIQPGWTLLLPDDPTTGLDAQLEQTAPAQSAGTESYTVHAGDTLWGIAEDELGDGAH 281          
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Match: UPI0004BA8281 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Jiangella gansuensis TaxID=281473 RepID=UPI0004BA8281)

HSP 1 Score: 63.2 bits (152), Expect = 2.060e-8
Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 0
Query:   47 VRAGDSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQLNVPANAPPPGPST-----HTVQAGDSYWAVSEHHLDEELHREATNREVLEYVHRMMDQNAPLLHHRDPALIIPGEVLQFP 175
            VRAG+S+W IA++  G G        I E+N GR+   G        I PGWQL +PA+A  P   T     H V  GD+ W ++E HL +     A   +++E     +  +   L  RDP LI PG  +  P
Sbjct:  198 VRAGESLWRIAQQELGDG---ARWPEIAELNYGRSQPGGGALDGTHWIAPGWQLLLPADAATPVADTGAAVQHVVVRGDTLWGIAEQHLGDG----ARYPDLVEASRDTVQPDGDRL--RDPDLIRPGWTITVP 322          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19812.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9KIX2_9ACTN8.110e-1543.40Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]
A0A812JVD8_9DINO1.160e-1238.10Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
UPI0011612A982.860e-1238.62LysM peptidoglycan-binding domain-containing prote... [more]
A0A2G6KFH6_9ACTN1.330e-1139.01LysM domain-containing protein n=1 Tax=Ilumatobact... [more]
A0A4R7HW13_9ACTN1.790e-1141.76Two-component SAPR family response regulator n=1 T... [more]
UPI0018F72F852.460e-1136.08LysM peptidoglycan-binding domain-containing prote... [more]
A0A3R9WCL2_9ACTN8.330e-1137.50LysM peptidoglycan-binding domain-containing prote... [more]
A0A6N2DFZ4_9ACTN1.530e-1045.00LysM peptidoglycan-binding domain-containing prote... [more]
UPI00165C69A91.210e-834.26LysM peptidoglycan-binding domain-containing prote... [more]
UPI0004BA82812.060e-834.33LysM peptidoglycan-binding domain-containing prote... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036779LysM domain superfamilyGENE3D3.10.350.10LysM domaincoord: 42..108
e-value: 2.0E-7
score: 32.7
IPR036779LysM domain superfamilyGENE3D3.10.350.10LysM domaincoord: 109..176
e-value: 1.5E-6
score: 29.6
IPR018392LysM domainPFAMPF01476LysMcoord: 46..103
e-value: 1.1E-5
score: 25.4
coord: 114..175
e-value: 0.18
score: 11.9
IPR018392LysM domainCDDcd00118LysMcoord: 46..102
e-value: 0.00437754
score: 32.0721

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19812contigP-wetherbeei_contig19812:3..530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19812.1.1mRNA_P-wetherbeei_contig19812.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19812 3..530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19812.1.1 ID=prot_P-wetherbeei_contig19812.1.1|Name=mRNA_P-wetherbeei_contig19812.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
GLVGVLPVAGAAAPALAVAPAISISHEATVSSVPQTLAPVGHTVEVVRAG
DSVWSIAERVAGGGDVSVLAQRIVEVNLGRTMNDGARFVTGALIEPGWQL
NVPANAPPPGPSTHTVQAGDSYWAVSEHHLDEELHREATNREVLEYVHRM
MDQNAPLLHHRDPALIIPGEVLQFPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036779LysM_dom_sf
IPR018392LysM_dom