prot_P-wetherbeei_contig19786.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig19786.1.1
Unique Name	prot_P-wetherbeei_contig19786.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	148

Homology

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: A0A1F3A7V3_9PROT (MerR family transcriptional regulator n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A7V3_9PROT)

HSP 1 Score: 229 bits (585), Expect = 1.500e-75
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0

Query:   20 IYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD 147
            +YSIAELAREFAVT+RTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGF+LAEIK+LLDLY VDRTGLQQMRELLRRSRLHIE+LERRRADLDAQIGEFKDVE QVSAEL RRGADPASD
Sbjct:    1 MYSIAELAREFAVTARTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFSLAEIKQLLDLYQVDRTGLQQMRELLRRSRLHIEELERRRADLDAQIGEFKDVEAQVSAELVRRGADPASD 128

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: UPI001E4FD9EE (MerR family DNA-binding transcriptional regulator n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E4FD9EE)

HSP 1 Score: 226 bits (576), Expect = 6.630e-74
Identity = 115/147 (78.23%), Postives = 130/147 (88.44%), Query Frame = 0

Query:    1 MSVAVTPSGKSPAPRDTQRIYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD 147
            M+VA  PSG+ P+PRD QRIYSIAEL+REFA+T RTIRFYEDEGLIKPRRQGT RLY+ GDR RL WILRGKRLGF+LAEI+ELLDLY VDRTG+QQ+RELLRRS+LHI DLER+RADLD  IGEF+ VE QVSAEL++RG DP SD
Sbjct:    1 MTVAAIPSGQMPSPRDPQRIYSIAELSREFAITPRTIRFYEDEGLIKPRRQGTMRLYTAGDRTRLSWILRGKRLGFSLAEIRELLDLYQVDRTGIQQLRELLRRSQLHIVDLERKRADLDQHIGEFRQVEAQVSAELKQRGVDPESD 147

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: A0A1Q3KKC6_9PROT (HTH merR-type domain-containing protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3KKC6_9PROT)

HSP 1 Score: 221 bits (564), Expect = 4.470e-72
Identity = 114/147 (77.55%), Postives = 128/147 (87.07%), Query Frame = 0

Query:    1 MSVAVTPSGKSPAPRDTQRIYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD 147
            MSVA + S K   PRDTQRIYSIAEL+REFA+T RTIRFYEDEGLIKPRRQG  RLYSVGDR RLGWILRGKRLGF+LAEI+ELLDLY VDRTG+QQ+RELLRRS+LHI DLER+RADLD  I EF++VE+QVS EL++RG DP  D
Sbjct:    1 MSVAASSSAKGAVPRDTQRIYSIAELSREFAITPRTIRFYEDEGLIKPRRQGMTRLYSVGDRTRLGWILRGKRLGFSLAEIRELLDLYQVDRTGVQQLRELLRRSQLHIADLERKRADLDQHINEFREVESQVSTELRQRGVDPEGD 147

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: A0A259MMT6_9PROT (HTH merR-type domain-containing protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MMT6_9PROT)

HSP 1 Score: 218 bits (555), Expect = 1.050e-70
Identity = 112/147 (76.19%), Postives = 128/147 (87.07%), Query Frame = 0

Query:    1 MSVAVTPSGKSPAPRDTQRIYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD 147
            M+ A  PS K+PA RD+QRIYSIAEL+REFA+T RTIRFYEDEGLIKPRR GT RLY+VGDR RL WILRGKRLGF+LAEI+ELLDLY VDRTG+QQ+RELLRR +LHI DLER+RADLD  IGEF++V  QVSAEL++RG DP SD
Sbjct:    1 MTAAALPSAKTPALRDSQRIYSIAELSREFAITPRTIRFYEDEGLIKPRRHGTTRLYTVGDRTRLSWILRGKRLGFSLAEIRELLDLYQVDRTGMQQLRELLRRCQLHIGDLERKRADLDQHIGEFREVAAQVSAELKQRGIDPESD 147

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: A0A1H8YFU9_9PROT (DNA-binding transcriptional regulator, MerR family n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8YFU9_9PROT)

HSP 1 Score: 216 bits (549), Expect = 9.510e-70
Identity = 115/150 (76.67%), Postives = 128/150 (85.33%), Query Frame = 0

Query:    1 MSVAVTPSG---KSPAPRDTQRIYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD 147
            M VA  P+    KS A RD+QRIYSIAEL+REFA+T RTIRFYEDEGLIKPRRQG  RLYS GDR RLGWILRGKRLGF LAEI+ELLDLY VDRTGLQQ+RELLRRSRLHI DLE++R DLDA I EFK+VE+QVSAEL++RG DP +D
Sbjct:    1 MPVAAPPAASTAKSSALRDSQRIYSIAELSREFAITPRTIRFYEDEGLIKPRRQGLTRLYSAGDRTRLGWILRGKRLGFALAEIRELLDLYQVDRTGLQQLRELLRRSRLHITDLEKKRRDLDAHISEFKEVESQVSAELRQRGVDPEND 150

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: A0A1T4RYL5_9HYPH (DNA-binding transcriptional regulator, MerR family n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RYL5_9HYPH)

HSP 1 Score: 209 bits (532), Expect = 3.130e-67
Identity = 112/147 (76.19%), Postives = 125/147 (85.03%), Query Frame = 0

Query:    1 MSVAVTPSGKSPAPRDTQRIYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD 147
            MSVA   S ++   RD QRIYSIAELAREF +T+RTIRFYEDEGLIKPRRQG  RLYS GDR RLGWILRGKRLGF+LAEIKELLDLY VDRTG+QQ+RELLRRSRLHIEDLERRR DLDA I EF++VE+Q + EL++RG D A D
Sbjct:    1 MSVAAPASTQTQ--RDLQRIYSIAELAREFGITARTIRFYEDEGLIKPRRQGLTRLYSAGDRTRLGWILRGKRLGFSLAEIKELLDLYQVDRTGVQQLRELLRRSRLHIEDLERRRRDLDAHIQEFREVESQAATELRKRGIDLAKD 145

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: A0A537MWQ0_9PROT (MerR family DNA-binding transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MWQ0_9PROT)

HSP 1 Score: 209 bits (532), Expect = 3.350e-67
Identity = 110/138 (79.71%), Postives = 122/138 (88.41%), Query Frame = 0

Query:   10 KSPAPRDTQRIYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD 147
            KSP PRD+ RIYSIAELAREFA+T+RTIRFYEDEGLIKPRRQG  RLYS  DR RL WILRGKRLGF+LAEIKELLDLY VDRTGLQQ+RELLRRSRLHI DLER+R DLDA I EF++VE QV+AEL++RG DP +D
Sbjct:   11 KSP-PRDSARIYSIAELAREFAITARTIRFYEDEGLIKPRRQGLTRLYSAHDRVRLSWILRGKRLGFSLAEIKELLDLYQVDRTGLQQLRELLRRSRLHITDLERKRRDLDAHITEFREVEAQVAAELKQRGVDPEND 147

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: A0A5C8PI04_9HYPH (MerR family DNA-binding transcriptional regulator n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PI04_9HYPH)

HSP 1 Score: 162 bits (411), Expect = 8.890e-49
Identity = 81/129 (62.79%), Postives = 104/129 (80.62%), Query Frame = 0

Query:   19 RIYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD 147
            R ++IAELA+EF VT+R IRFYEDEGLI P RQGT R+YS GDRARLGW+LRGKRLGF+L EI++LL+LYH D +G+QQ+R +L +SR HI +LE+R  DL AQ+ EF++VE Q  A L+ +G DP S+
Sbjct:   18 RTWTIAELAKEFGVTARAIRFYEDEGLIAPERQGTTRVYSAGDRARLGWVLRGKRLGFSLGEIRDLLNLYHSDHSGVQQIRGVLHKSREHIAELEKRLRDLRAQLAEFREVEAQAEAFLRGKGVDPDSE 146

[Close]

BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: A0A5C5TA32_9HYPH (MerR family DNA-binding transcriptional regulator n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TA32_9HYPH)

HSP 1 Score: 156 bits (394), Expect = 3.200e-46
Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = 0

Query:   19 RIYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGAD 143
            R ++IAELA+EF VT R IRFYEDE LI P RQGT R+YS GDRARLGWILRGKRLGF+L EIKELL+LYH DR+G+QQ+R +LR+SR HI +LE+R  DL  Q+ EF++VE      L  +G D
Sbjct:   18 RTWTIAELAKEFGVTPRAIRFYEDEDLIAPARQGTSRIYSAGDRARLGWILRGKRLGFSLGEIKELLNLYHSDRSGVQQIRGVLRKSREHIAELEKRLRDLRTQLAEFREVEAHAMEFLHDKGVD 142

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BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Match: UPI0015D47920 (MerR family DNA-binding transcriptional regulator n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D47920)

HSP 1 Score: 134 bits (337), Expect = 1.060e-37
Identity = 70/125 (56.00%), Postives = 90/125 (72.00%), Query Frame = 0

Query:   20 IYSIAELAREFAVTSRTIRFYEDEGLIKPRRQGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRELLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADP 144
            +Y++ +LA E  VT RT+RFYED+GL+ P RQG  R+Y   DRAR+  ILRGKRLGF+LAEI E LDLY +D  G++Q+R LLRR R   + LER+R DL+A + E  D+E QV+A L  RGA P
Sbjct:    4 LYTVNQLAEELGVTPRTLRFYEDKGLLSPNRQGNNRVYDKRDRARMKLILRGKRLGFSLAEIAEYLDLYKIDGNGIEQLRVLLRRVRERRDVLERQREDLEATVAELADIEDQVAAALAERGAAP 128

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig19786.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1F3A7V3_9PROT	1.500e-75	93.75	MerR family transcriptional regulator n=2 Tax=Alph...	[more]
UPI001E4FD9EE	6.630e-74	78.23	MerR family DNA-binding transcriptional regulator ...	[more]
A0A1Q3KKC6_9PROT	4.470e-72	77.55	HTH merR-type domain-containing protein n=3 Tax=Al...	[more]
A0A259MMT6_9PROT	1.050e-70	76.19	HTH merR-type domain-containing protein n=3 Tax=Al...	[more]
A0A1H8YFU9_9PROT	9.510e-70	76.67	DNA-binding transcriptional regulator, MerR family...	[more]
A0A1T4RYL5_9HYPH	3.130e-67	76.19	DNA-binding transcriptional regulator, MerR family...	[more]
A0A537MWQ0_9PROT	3.350e-67	79.71	MerR family DNA-binding transcriptional regulator ...	[more]
A0A5C8PI04_9HYPH	8.890e-49	62.79	MerR family DNA-binding transcriptional regulator ...	[more]
A0A5C5TA32_9HYPH	3.200e-46	64.00	MerR family DNA-binding transcriptional regulator ...	[more]
UPI0015D47920	1.060e-37	56.00	MerR family DNA-binding transcriptional regulator ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..129
None	No IPR available	GENE3D	1.10.1660.10		coord: 12..133 e-value: 4.0E-28 score: 99.7
None	No IPR available	PANTHER	PTHR30204:SF58	HTH-TYPE TRANSCRIPTIONAL REGULATOR YFMP	coord: 19..131
None	No IPR available	PANTHER	PTHR30204	REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXR	coord: 19..131
None	No IPR available	CDD	cd04776	HTH_GnyR	coord: 21..138 e-value: 2.53412E-46 score: 144.595
IPR000551	MerR-type HTH domain	SMART	SM00422	merrmega3	coord: 21..88 e-value: 1.0E-19 score: 81.5
IPR000551	MerR-type HTH domain	PFAM	PF13411	MerR_1	coord: 21..86 e-value: 2.2E-16 score: 59.7
IPR000551	MerR-type HTH domain	PROSITE	PS50937	HTH_MERR_2	coord: 20..87 score: 22.64566
IPR009061	Putative DNA-binding domain superfamily	SUPERFAMILY	46955	Putative DNA-binding domain	coord: 21..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig19786	contig	P-wetherbeei_contig19786:178..621 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig19786.1.1	mRNA_P-wetherbeei_contig19786.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig19786 178..621 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig19786.1.1 ID=prot_P-wetherbeei_contig19786.1.1|Name=mRNA_P-wetherbeei_contig19786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
MSVAVTPSGKSPAPRDTQRIYSIAELAREFAVTSRTIRFYEDEGLIKPRR
QGTQRLYSVGDRARLGWILRGKRLGFTLAEIKELLDLYHVDRTGLQQMRE
LLRRSRLHIEDLERRRADLDAQIGEFKDVETQVSAELQRRGADPASD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000551	MerR-type_HTH_dom
IPR009061	DNA-bd_dom_put_sf