prot_P-wetherbeei_contig197.5.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig197.5.2
Unique Nameprot_P-wetherbeei_contig197.5.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length407
Homology
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: A0A835ZJ13_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ13_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.760e-22
Identity = 48/92 (52.17%), Postives = 73/92 (79.35%), Query Frame = 0
Query:  314 QMLPWATSDRAEVIRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSNFYRVT 405
            QMLP+ T+ +AE +RG+VLG+ ++G  SS ++ DV+  E +ERR+PL+SPL+KSITVL+   I  G+++G+RVR +KIYYLR+LD+ + +VT
Sbjct:   93 QMLPYMTAPKAEPVRGIVLGRFKRGIASSFIVRDVLYDEAIERRVPLYSPLLKSITVLKRRAIYEGKQEGKRVRPSKIYYLRNLDNKYSQVT 184          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: K0SBD7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBD7_THAOC)

HSP 1 Score: 100 bits (248), Expect = 2.940e-20
Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 0
Query:  325 EVIRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSNFYRVT 405
            E IRGVVLG++ KG D+S+ L DV+ GE VER++ LHSPL+KS+ VL+E F+  GR KGRRV+RAK+YYLRD      RVT
Sbjct:  199 EKIRGVVLGRHNKGLDTSINLRDVLFGEPVERKVKLHSPLVKSLKVLEEGFVNRGRRKGRRVKRAKLYYLRDRKPEETRVT 279          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: A0A7S2P9J5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P9J5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.970e-20
Identity = 46/83 (55.42%), Postives = 62/83 (74.70%), Query Frame = 0
Query:  323 RAEVIRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSNFYRVT 405
            R + IRGVVLG+  KG D+ + L DV+ GE VER++ LHSP++KS+ VL+E F+  G++KGRRV+RAK+YYLRD      RVT
Sbjct:   82 RYDKIRGVVLGRENKGLDTGIYLKDVLFGEHVERKVKLHSPMVKSLKVLEEGFVNRGKKKGRRVKRAKLYYLRDRKPEETRVT 164          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: B8BTE2_THAPS (50S ribosomal protein l19-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTE2_THAPS)

HSP 1 Score: 95.5 bits (236), Expect = 1.290e-19
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = 0
Query:  327 IRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSNFYRVT 405
            IRGVVLG+  +G D+S+ L DV+ GE VER+I LHSP++K++ VL+E F+  G+ KG+RVRRAK+YYLRD      RVT
Sbjct:   72 IRGVVLGRENRGMDTSIYLKDVLFGEHVERKIKLHSPMVKTLKVLEEGFVNRGKRKGKRVRRAKLYYLRDRKPEETRVT 150          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: D7FKS2_ECTSI (50S ribosomal protein l19-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS2_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 6.700e-18
Identity = 45/83 (54.22%), Postives = 60/83 (72.29%), Query Frame = 0
Query:  323 RAEVIRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSNFYRVT 405
            R   +RGV+L +  KG DSS+LL DVI G  VE  IPL SPLI+S+ V++ +FI  G+ +G+RVR A+IYY+RDLD   YR+T
Sbjct:  132 RTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRIT 214          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: A0A8J9SNI4_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SNI4_PHATR)

HSP 1 Score: 87.0 bits (214), Expect = 1.680e-17
Identity = 42/76 (55.26%), Postives = 60/76 (78.95%), Query Frame = 0
Query:  321 SDRAEVIRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRD 396
            SD  ++IRGVV+G  R+  D++VLL DV+ GE +ERR+PLHSPL++S+ VL+E+FI  G+ K   V+RAK+Y+LRD
Sbjct:   18 SDDTDLIRGVVIGITRRALDTTVLLRDVVFGEPIERRVPLHSPLLRSLKVLEENFIYKGKRK---VKRAKLYFLRD 90          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: A0A1Z5JBA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBA1_FISSO)

HSP 1 Score: 88.6 bits (218), Expect = 5.380e-17
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 0
Query:  319 ATSDRAEVIRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSNFYRVT 405
            A  +  E IRGVVLG +RKG D SVLL DV+ G+ VERRI LHSPL++S+ +L+E+F+  G+ K   V+RAK+Y+LRD +    RVT
Sbjct:  101 AEKNEIEKIRGVVLGISRKGLDHSVLLRDVVFGQPVERRILLHSPLLQSVKLLEENFVYKGKRK---VKRAKLYFLRDRNPELTRVT 184          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: A0A7S3MA30_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MA30_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.890e-15
Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 0
Query:  316 LPWATSDRAEVIRGVVLGQNRKGA--DSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSNFYRV 404
            LP+ ++   +VI+GVV+G+  K    D+S+LLL+V +G  VERRIP++SPLIK I V+Q++FI  G++   RVRR+K+YYL DL   FY V
Sbjct:   74 LPYMSATVPDVIKGVVIGRFNKHMRMDASLLLLNVESGTKVERRIPIYSPLIKDIKVIQKAFIHKGKK---RVRRSKLYYLSDLHPKFYTV 161          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: A0A7S2ID41_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ID41_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.420e-15
Identity = 39/70 (55.71%), Postives = 57/70 (81.43%), Query Frame = 0
Query:  327 IRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRD 396
            IRGVVLG++ KG  SSV + DV+ GE ++R++PLHSPL+KS+ VL+++F+  G++K   V+RAK+YYLRD
Sbjct:   68 IRGVVLGKSNKGLGSSVQIRDVMYGEPIDRQVPLHSPLLKSLKVLEKNFVHKGKKK---VKRAKLYYLRD 134          
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Match: A0A7S3PU14_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PU14_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 9.170e-15
Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 0
Query:  321 SDRAEVIRGVVLGQNRKGADSSVLLLDVIAGEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSNFYRVT 405
            S+  E IRGVVLG +++G  +   L DV+ GE ++R+IPL+SPLIK I VL+E+F+    +K R+V+RAK+YYLRD      RVT
Sbjct:   41 SNETEKIRGVVLGMDKRGLGTGFYLRDVVFGEPIDRKIPLYSPLIKDIKVLEENFVF---KKKRKVKRAKLYYLRDRLPQETRVT 122          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig197.5.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZJ13_9STRA2.760e-2252.17Translation protein SH3-like domain-containing pro... [more]
K0SBD7_THAOC2.940e-2060.49Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2P9J5_9STRA2.970e-2055.42Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8BTE2_THAPS1.290e-1956.9650S ribosomal protein l19-like protein n=1 Tax=Tha... [more]
D7FKS2_ECTSI6.700e-1854.2250S ribosomal protein l19-like protein n=2 Tax=Ect... [more]
A0A8J9SNI4_PHATR1.680e-1755.26Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A1Z5JBA1_FISSO5.380e-1754.02Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3MA30_9STRA1.890e-1550.55Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2ID41_9STRA4.420e-1555.71Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3PU14_9STRA9.170e-1550.59Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038657Ribosomal protein L19 superfamilyGENE3D2.30.30.790coord: 310..406
e-value: 2.0E-19
score: 71.6
IPR001857Ribosomal protein L19PFAMPF01245Ribosomal_L19coord: 321..404
e-value: 5.6E-17
score: 61.7
IPR001857Ribosomal protein L19PANTHERPTHR15680RIBOSOMAL PROTEIN L19coord: 322..397
coord: 130..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..148
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 320..404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig197contigP-wetherbeei_contig197:6001..7849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig197.5.2mRNA_P-wetherbeei_contig197.5.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig197 5447..7883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig197.5.2 ID=prot_P-wetherbeei_contig197.5.2|Name=mRNA_P-wetherbeei_contig197.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=407bp
MLAGVNRLLLRRAPGQRARQVLTAAEHQKPKVERLMHSQRRRESPGGPRA
GPIAAGGLSRYLTVGSARFEVCQLRPPPAQRESGSCACGAHRRISMAATD
GRQHDSGDVPSPTAMADDPGASNAPVPLATAVASGDGSEEKTEQEAAPRA
KHRIPQKRASKLMGQLRKEEASKLAMELPRFNTGDALEIRVRPLSFPNRY
FHLSAPAFLKKRESVQPSRLVSVRWPCSTPLPAAWAFFGSSGYGMMGPLP
RRRIVVVGKRQMPALGSFCFCHHESCHCLATPGSRRLPRQSCPAGNGAGN
SLASQRPCNRKRSQMLPWATSDRAEVIRGVVLGQNRKGADSSVLLLDVIA
GEGVERRIPLHSPLIKSITVLQESFIKTGREKGRRVRRAKIYYLRDLDSN
FYRVTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038657L19_sf
IPR001857Ribosomal_L19
IPR008991Translation_prot_SH3-like_sf