prot_P-wetherbeei_contig19593.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19593.2.1
Unique Nameprot_P-wetherbeei_contig19593.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length227
Homology
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: A0A7X6NXI8_9ACTN (Acyl-CoA dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6NXI8_9ACTN)

HSP 1 Score: 221 bits (564), Expect = 4.370e-68
Identity = 130/238 (54.62%), Postives = 146/238 (61.34%), Query Frame = 0
Query:   12 ELLALTDPDDAAFGALPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEAGRSAASAGLNGVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGT----------------------LVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVGRLASMWRDDPHAMAHLGAIDATL 227
            E LALT+        LPLPG+G TA RF  LW+  AR+P  GR+AEAH DA+AILAEAGRSAA     GVWAAGGPDP  L R  AG   L G+KHWCS A+  + ALVTA    G                        LV VDL   GV +G   WQS A AA+DTRSV FDL VD+  ++GVDDWYLRR GFWHGAVGVAA WAG + G+V R       DPHA AHLGAIDA L
Sbjct:    6 EFLALTEE-------LPLPGAGETARRFDQLWALAARSPQLGRLAEAHFDAVAILAEAGRSAAPGQRFGVWAAGGPDPATLRRTDAGL-RLVGTKHWCSGASIVSHALVTARQDTGNAAADDRGVGGSGGERGGGVDTNALVLVDLSAPGVTMGESDWQSAAFAAIDTRSVAFDLAVDEDSVIGVDDWYLRRRGFWHGAVGVAACWAGAISGIVERSVGHIPTDPHAQAHLGAIDAEL 235          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: A0A1N7G8X8_9NOCA (Acyl-CoA dehydrogenase, middle domain n=1 Tax=Williamsia sterculiae TaxID=1344003 RepID=A0A1N7G8X8_9NOCA)

HSP 1 Score: 153 bits (387), Expect = 7.640e-42
Identity = 103/204 (50.49%), Postives = 114/204 (55.88%), Query Frame = 0
Query:   27 LPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEA-GRSAASAGLNGVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVGRLASMWRDDPHA--MAHLGAIDATL 227
            +P PGSGAT +RF  L          GRV EAH DA+ I AE  G       L GVWAA  P PL   R   GRW L G+K WCSAA+ AT ALVTA       L  VDL  AG+ VG  SW +  M+  DTR VHFD  V  T + G DD YLRRPGFWHG VGVAA W G   GV  RL S    DP    +A LG +DA L
Sbjct:   21 VPRPGSGATVERFRYLAEHTRDDIPVGRVLEAHLDAVVIAAELDGPVVGDDQLWGVWAAEPPSPLLTARRNGGRWTLCGTKPWCSAASSATHALVTARVGDTRPLFAVDLAHAGIGVGETSWHAAGMSRTDTRKVHFD-GVPGTPVGGADD-YLRRPGFWHGGVGVAACWLGGATGVADRLRSRVTADPDPILLAQLGCVDAWL 222          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: UPI001FEAD6AA (acyl-CoA/acyl-ACP dehydrogenase n=1 Tax=Pseudoxanthomonas suwonensis TaxID=314722 RepID=UPI001FEAD6AA)

HSP 1 Score: 146 bits (368), Expect = 5.820e-39
Identity = 94/205 (45.85%), Postives = 113/205 (55.12%), Query Frame = 0
Query:   26 ALPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEAGRSAASAG-LNGVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVGRLASMWR--DDPHAMAHLGAIDATL 227
            ALPLPG G T  R+ AL   GA   +  +V EAHHDA+AILAE G    + G L  VWAA GP+   + R   G   L G K WCS A+F  +ALVTA S     LV VDL + GV+V AP W++  MAA+ +  V FD        +G    YL RPGFWHG  GVAA W G    +  R+A   R   DPH  A LG +D  L
Sbjct:   26 ALPLPGRGDTLARWRALAGIGAEDLALAKVLEAHHDALAILAELGAPRPAPGTLLAVWAAEGPESTLVVRDGPGSARLHGRKPWCSGASFVDAALVTATSGDARQLVLVDLRQPGVRVPAPQWEAIGMAAIPSGPVEFDAVP--CQRIGAPGAYLDRPGFWHGGAGVAACWLGAAVAIAQRMADPARVARDPHLAATLGRVDMAL 228          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: UPI001E5C888B (acyl-CoA dehydrogenase n=1 Tax=Corynebacterium freneyi TaxID=134034 RepID=UPI001E5C888B)

HSP 1 Score: 144 bits (363), Expect = 3.430e-38
Identity = 107/208 (51.44%), Postives = 115/208 (55.29%), Query Frame = 0
Query:   27 LPLPGSGATADRFLALWSFGARAP-SFGRVAEAHHDAMAILAEAG--RSAASAGLNGVWAAGGPDP-LRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDG---VVGRLASMWRDDPHAMAHLGAIDATL 227
            LP PGSG TA RFLALW  G RA  S GR+AEA HDA AILAE G  R  A   L GVWAA  P P L   R  +G W L G K WCS     T ALVTA       L   DL   GV   A +W +  MAA  T  V FD     T  VG    YL RPGFWHG +GVAA W G V G   V+ R AS     PHA+AHLGA+DA L
Sbjct:    8 LPTPGSGDTAARFLALWE-GCRADVSEGRLAEADHDADAILAEIGDGRRVADGELWGVWAAEPPHPVLEARRDDSGGWLLDGVKAWCSGVGRCTHALVTARVDGKPRLFAADLRHPGVSGSADNWVNAGMAATATGEVAFDAVPAVT--VGGPREYLDRPGFWHGGIGVAACWLGGVSGLCDVLARTASR-HGKPHALAHLGAVDAAL 211          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: A0A0Q6H1Q4_9NOCA (Acyl-CoA dehydrogenase n=5 Tax=Rhodococcus TaxID=1827 RepID=A0A0Q6H1Q4_9NOCA)

HSP 1 Score: 142 bits (358), Expect = 1.430e-37
Identity = 97/207 (46.86%), Postives = 112/207 (54.11%), Query Frame = 0
Query:   25 GALPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEAGRSAASAG-LNGVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVG---RLASMWRDDPHAMAHLGAIDATL 227
            G LPLPGSGAT +R+ AL  +       GR+ EAH+DA AILAEAG    S+G L GVWAA     +   R   G W L G K WCS A   T ALVTA +     L  V L R+ V+    SW    M   DT +V FD        VG  D+Y  R GFWHGA+GVAA W G   GV     R A   R  PHA+AHLGA+DA L
Sbjct:   17 GNLPLPGSGATGERWTALTDWTRADTVVGRLLEAHYDAAAILAEAGADPVSSGQLWGVWAAEVAPAVEARRLADGSWTLSGRKQWCSGAHRCTHALVTARADGVSRLFAVVLDRSTVRPEPNSWPPVGMHDSDTGAVSFDGAR--ASAVGDPDFYTGRAGFWHGAIGVAACWFGAASGVAEPLYRRAGEGRAGPHALAHLGAVDAAL 221          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: A0A842JW35_9NOCA (Acyl-CoA dehydrogenase n=1 Tax=Rhodococcus sp. 4CII TaxID=2834580 RepID=A0A842JW35_9NOCA)

HSP 1 Score: 142 bits (358), Expect = 1.540e-37
Identity = 95/205 (46.34%), Postives = 113/205 (55.12%), Query Frame = 0
Query:   27 LPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEA-GRSAASAGLNGVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVGRL---ASMWRDDPHAMAHLGAIDATL 227
            LPLPG GATADR+  L  + +R  + GR+ EAH DA AILAE  G  A    + GVWA+  P P+      +  W LRG+K WCS A+  T ALVTA       L  VDL    V  G   W++P MAA DT SV FD DV     +G    YL RPGFWHG +GVAA W G    V   L   A   R D H +AHLGA+D  +
Sbjct:   25 LPLPGGGATADRWAHLTRWSSRDLAVGRLLEAHADADAILAELDGTRAGRDEVWGVWASEPPHPVLDASESSSGWRLRGTKAWCSGASMCTHALVTARVAGQPRLFAVDLREPRVAAGTGGWRNPGMAATDTESVTFD-DVP-ARPIGAATAYLERPGFWHGGIGVAACWFGGALAVAEPLRARAGSGRADSHQLAHLGAVDVAV 227          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: F4CVP2_PSEUX (Putative acyl-CoA dehydrogenase-related protein n=2 Tax=Pseudonocardia dioxanivorans TaxID=240495 RepID=F4CVP2_PSEUX)

HSP 1 Score: 142 bits (358), Expect = 2.450e-37
Identity = 93/201 (46.27%), Postives = 111/201 (55.22%), Query Frame = 0
Query:   27 LPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEAGRSAASAGLNGVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFD-LDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVG--RLASMWRD-DPHAMAHLGAI 223
            LP PG+GATA R+ AL  +G    SF R+ E H DA+AILAEAGR+       GVWAA       +  G AG W LRG   +CS A     ALV AA+P G  +  V L R GV+  A +WQ+  MA  D+  V  D + VDD  LVG   WY  RPGFWHG  GVAA W G   GV+   RL     D DPH +A  G +
Sbjct:   43 LPAPGAGATAQRWAALARWGRTELSFARLCEGHTDAVAILAEAGRTPVPGATYGVWAARSGGTGAVLAGGAGAWRLRGRVRFCSGAHGLDRALVVAAAPDGSRIADVPLARPGVRPVAGTWQTVGMARSDSADVDLDDVPVDDDALVGGPGWYTARPGFWHGGGGVAAVWLGGAAGVLDDLRLVVTATDPDPHRLALFGEL 243          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: A0A0S9R166_9ACTN (Uncharacterized protein n=5 Tax=Actinomycetia TaxID=1760 RepID=A0A0S9R166_9ACTN)

HSP 1 Score: 140 bits (354), Expect = 4.060e-37
Identity = 92/203 (45.32%), Postives = 110/203 (54.19%), Query Frame = 0
Query:   27 LPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEAGRSAASAGLNGVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVG--APSWQSPAMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVGRLASMWRDDPHAMAHLGAIDATL 227
            LPLPGSGAT DR  AL + G    S  ++AE HHDA+AI AE      + G+  VWAA  P  +        RWHL G+K +CS A   T ALVTA       L  VDL + GV V   AP+W  P MA  D R+V   LD  D   VG    Y++RPGFWHGA+G+AA W G    V   L    R D H +AH GA+ A L
Sbjct:   16 LPLPGSGATHDRLDALVALGHEDLSLAKLAEPHHDAVAIGAELDHPIDTDGVWAVWAAAPPFAVVRATRTGDRWHLDGTKAFCSGADLVTHALVTAEDDGHDRLFAVDLDQPGVAVDEQAPTWVGPGMA--DARTVTLRLDAVDAVDVGAPGAYVQRPGFWHGAIGIAAVWTGGARAVADVLERSARLDEHGLAHRGAVRAAL 216          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: A0A0Q5W4Z2_9ACTN (Acyl-CoA dehydrogenase n=2 Tax=Modestobacter sp. Leaf380 TaxID=1736356 RepID=A0A0Q5W4Z2_9ACTN)

HSP 1 Score: 140 bits (354), Expect = 4.150e-37
Identity = 100/211 (47.39%), Postives = 113/211 (53.55%), Query Frame = 0
Query:   21 DAAFGALPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEAGRSAASAGLN-GVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVGRLASMWR---DDPHAMAHLGAIDATL 227
            DA + A PLPGSGATA+R+ AL   GA      R+AE H DA+A+LAE    A  AG   GVWAA  P          G W L G K WCS A   TSALVTA +  G  L  VDLG  GV     +W +P MA  DT  V  D DV     VG    YL RPGFWHG +GVAA WAG   GV   LA +     +DPH  A  GA+D  L
Sbjct:    3 DAGWSA-PLPGSGATAERWRALHDLGATDLPLARLAEGHADAVAVLAELDGPAPGAGERLGVWAAEPPSGRVGAERAGGGWRLSGVKQWCSGARVCTSALVTAHADDGRRLFLVDLGVRGVAPSPGAWAAPGMAGSDTADVLLD-DVPAL-AVGGPRAYLDRPGFWHGGIGVAAVWAGGAAGVARALADVVATAPEDPHRDAAWGAVDVAL 210          
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Match: A0A8F5A337_9ACTN (Acyl-CoA dehydrogenase family protein n=1 Tax=Modestobacter sp. L9-4 TaxID=2851567 RepID=A0A8F5A337_9ACTN)

HSP 1 Score: 141 bits (356), Expect = 4.150e-37
Identity = 101/233 (43.35%), Postives = 119/233 (51.07%), Query Frame = 0
Query:    3 VRRVRAEDSELLALTDPDDAAFGALPLPGSGATADRFLALWSFGARAPSFGRVAEAHHDAMAILAEAGRSAASAGLN-GVWAAGGPDPLRLERGCAGRWHLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSPAMAAVDTRSVHFDLDVDDTDL----VGVDDWYLRRPGFWHGAVGVAASWAGCVDGVVG---RLASMWRDDPHAMAHLGAIDATL 227
            VRR  A+  ELL           +LPLPGSGAT +R+ AL   G R     R+AE H DA+A+LAE G    +AG   GVWAA  P         A  W L G K WCS A   T+ALVTA +  G  L  +DL R GV+V +  W +  MA  DT  VH       TD+    VG    YL RPGFWHG +GVAA WAG   GV     R A     DP   A +GA+D  L
Sbjct:   19 VRRASADFRELLRTG-------WSLPLPGSGATLERWRALMGLGERDLPLARLAEGHADALAVLAEVGGPEPAAGARLGVWAAEPPQGRVTATRTAAGWRLSGRKQWCSGAGVLTAALVTATAEDGRRLFLLDLDRVGVRVDSSPWANAGMAGSDTADVHL------TDVPVVPVGAPRAYLDRPGFWHGGIGVAAVWAGGARGVAATLLRTAVERGPDPLRDAAVGAVDVLL 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19593.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X6NXI8_9ACTN4.370e-6854.62Acyl-CoA dehydrogenase n=1 Tax=Actinomycetia bacte... [more]
A0A1N7G8X8_9NOCA7.640e-4250.49Acyl-CoA dehydrogenase, middle domain n=1 Tax=Will... [more]
UPI001FEAD6AA5.820e-3945.85acyl-CoA/acyl-ACP dehydrogenase n=1 Tax=Pseudoxant... [more]
UPI001E5C888B3.430e-3851.44acyl-CoA dehydrogenase n=1 Tax=Corynebacterium fre... [more]
A0A0Q6H1Q4_9NOCA1.430e-3746.86Acyl-CoA dehydrogenase n=5 Tax=Rhodococcus TaxID=1... [more]
A0A842JW35_9NOCA1.540e-3746.34Acyl-CoA dehydrogenase n=1 Tax=Rhodococcus sp. 4CI... [more]
F4CVP2_PSEUX2.450e-3746.27Putative acyl-CoA dehydrogenase-related protein n=... [more]
A0A0S9R166_9ACTN4.060e-3745.32Uncharacterized protein n=5 Tax=Actinomycetia TaxI... [more]
A0A0Q5W4Z2_9ACTN4.150e-3747.39Acyl-CoA dehydrogenase n=2 Tax=Modestobacter sp. L... [more]
A0A8F5A337_9ACTN4.150e-3743.35Acyl-CoA dehydrogenase family protein n=1 Tax=Mode... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR046373Acyl-CoA oxidase/dehydrogenase, middle domain superfamilyGENE3D2.40.110.10coord: 86..174
e-value: 2.2E-7
score: 32.4
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilySUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 35..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19593contigP-wetherbeei_contig19593:592..1272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19593.2.1mRNA_P-wetherbeei_contig19593.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19593 583..1272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19593.2.1 ID=prot_P-wetherbeei_contig19593.2.1|Name=mRNA_P-wetherbeei_contig19593.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=227bp
MDVRRVRAEDSELLALTDPDDAAFGALPLPGSGATADRFLALWSFGARAP
SFGRVAEAHHDAMAILAEAGRSAASAGLNGVWAAGGPDPLRLERGCAGRW
HLRGSKHWCSAATFATSALVTAASPLGGTLVRVDLGRAGVQVGAPSWQSP
AMAAVDTRSVHFDLDVDDTDLVGVDDWYLRRPGFWHGAVGVAASWAGCVD
GVVGRLASMWRDDPHAMAHLGAIDATL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046373Acyl-CoA_Oxase/DH_mid-dom_sf
IPR009100AcylCoA_DH/oxidase_NM_dom