prot_P-wetherbeei_contig195.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig195.4.1
Unique Nameprot_P-wetherbeei_contig195.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length101
Homology
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BLAST of mRNA_P-wetherbeei_contig195.4.1 vs. uniprot
Match: A0A835ZJ37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ37_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.810e-7
Identity = 25/42 (59.52%), Postives = 28/42 (66.67%), Query Frame = 0 
Query:   60 DIFGALWFAVPKHKVSHSRKRHRLLDRIPKRITHYTICGKCG 101
             +FG LWFAVPK KVS  RKR R   R PKRIT+ + C  CG
Sbjct:   79 SVFGPLWFAVPKTKVSPGRKRQRGYHRAPKRITNISTCEACG 120
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BLAST of mRNA_P-wetherbeei_contig195.4.1 vs. uniprot
Match: A0A7S1Y1G4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y1G4_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 6.960e-5
Identity = 18/37 (48.65%), Postives = 27/37 (72.97%), Query Frame = 0 
Query:   65 LWFAVPKHKVSHSRKRHRLLDRIPKRITHYTICGKCG 101
            LW AVPKH+ SHS+KR R  +++PK + ++ +C KC 
Sbjct:   81 LWMAVPKHRTSHSKKRLRSRNKVPKDVENWELCVKCN 117
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig195.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZJ37_9STRA1.810e-759.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1Y1G4_9STRA6.960e-548.65Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002677Ribosomal protein L32pTIGRFAMTIGR01031TIGR01031coord: 68..101
e-value: 1.1E-5
score: 23.6
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 66..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig195contigP-wetherbeei_contig195:4927..5347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig195.4.1mRNA_P-wetherbeei_contig195.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig195 4927..5355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig195.4.1 ID=prot_P-wetherbeei_contig195.4.1|Name=mRNA_P-wetherbeei_contig195.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
MTHVVAPALRARLETFLGSAGASFRRRPWPPSALVLVTDALPAAGGMTKS
PTSLRSLTLDIFGALWFAVPKHKVSHSRKRHRLLDRIPKRITHYTICGKC
G
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002677Ribosomal_L32p
IPR011332Ribosomal_zn-bd