prot_P-wetherbeei_contig19406.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19406.1.1
Unique Nameprot_P-wetherbeei_contig19406.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length60
Homology
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BLAST of mRNA_P-wetherbeei_contig19406.1.1 vs. uniprot
Match: D7FMV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV8_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 2.190e-5
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0 
Query:    3 GTSASTGFVTFTNLVTAAEAAQVRVMDRPGMFIAAAAPEPRDLVWRNVPHSLFQIQHR 60
            G  + TGFVTF  L   A A    V +RP +F    APEPRD+VW+NV + +  +Q+R
Sbjct: 1429 GGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLTPAPEPRDIVWKNVTNHVIHVQNR 1486
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BLAST of mRNA_P-wetherbeei_contig19406.1.1 vs. uniprot
Match: A0A6H5KIL5_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL5_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 2.990e-5
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0 
Query:    3 GTSASTGFVTFTNLVTAAEAAQVRVMDRPGMFIAAAAPEPRDLVWRNVPHSLFQIQHR 60
            G  + TGFVTF  L   A A    V +RP +F    APEPRD+VW+NV + +  +Q+R
Sbjct: 1185 GGMSGTGFVTFKCLSGRACAVSTLVTNRPEVFNLKPAPEPRDIVWKNVTNHVIHVQNR 1242
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19406.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMV8_ECTSI2.190e-544.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIL5_9PHAE2.990e-544.83ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19406contigP-wetherbeei_contig19406:527..706 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19406.1.1mRNA_P-wetherbeei_contig19406.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19406 527..706 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19406.1.1 ID=prot_P-wetherbeei_contig19406.1.1|Name=mRNA_P-wetherbeei_contig19406.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=60bp
TFGTSASTGFVTFTNLVTAAEAAQVRVMDRPGMFIAAAAPEPRDLVWRNV
PHSLFQIQHR
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