prot_P-wetherbeei_contig19370.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19370.1.1
Unique Nameprot_P-wetherbeei_contig19370.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length55
Homology
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: K3X3Y7_GLOUD (MUTSd domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Y7_GLOUD)

HSP 1 Score: 63.5 bits (153), Expect = 4.430e-12
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAENAE 55
            R+KEGFS+FG+ +RT++K G   L+QWML P ++ A+IN R D V  F +A N E
Sbjct:   12 RAKEGFSLFGLINRTVTKSGNYKLRQWMLTPLINPALINERLDAVAFFFQASNEE 66          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: UPI00044492AE (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI00044492AE)

HSP 1 Score: 65.1 bits (157), Expect = 6.380e-11
Identity = 25/53 (47.17%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAEN 53
            ++KEG S+F + D+T +  GRR L+ W+L+PSLD+++I+SR D ++ F+R EN
Sbjct:  243 KTKEGLSLFAILDQTRTALGRRLLRTWLLRPSLDISIISSRHDAIDCFTRPEN 295          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: A0A7S3Q5I7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5I7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 8.750e-11
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELF 48
            + KEGFS+F + DRT SK GR CLK+WML+P L +  I  RQDG++LF
Sbjct:  578 KDKEGFSLFTLLDRTKSKVGRACLKEWMLQPLLHIPSIIERQDGIDLF 625          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: UPI0004623A64 (MutS family protein MSH5 n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004623A64)

HSP 1 Score: 64.3 bits (155), Expect = 1.190e-10
Identity = 25/53 (47.17%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAEN 53
            ++KEG S+FG+ + T +  GR  +++W L+PS+ LA+IN+R D VE F+RA+N
Sbjct:  295 KTKEGLSLFGILNNTKTTLGRALMREWFLRPSMSLAIINARHDAVECFTRADN 347          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: D7FKD9_ECTSI (MutS protein homolog 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD9_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.220e-10
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAENAE 55
            R K    +F V  RT S  GRRCLK+WMLKP  D+A I+ RQDGVE+  +AENAE
Sbjct:   89 RRKSSILMFSVA-RTKSASGRRCLKEWMLKPLHDIAAISVRQDGVEVLMQAENAE 142          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: A0A167PIB9_PHYB8 (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167PIB9_PHYB8)

HSP 1 Score: 63.5 bits (153), Expect = 2.230e-10
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAENAE 55
            R KEGFS+FGV D+T++  G   L+QW+ +PSLD+++IN+R   VE FS    AE
Sbjct:  192 RGKEGFSLFGVLDQTVTPLGHHLLRQWLQRPSLDISLINTRHLSVEYFSGHGRAE 246          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: A0A8K1C711_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C711_PYTOL)

HSP 1 Score: 63.5 bits (153), Expect = 2.230e-10
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAE 52
            RSKEGFS++G+ +RT++K G   L+QWML P LD+A+IN R D VE   + +
Sbjct:  236 RSKEGFSLYGLLNRTLTKGGAALLRQWMLAPLLDVAIINMRLDAVEYLCKPD 287          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: A0A392PL58_9FABA (DNA mismatch repair protein MSH5-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PL58_9FABA)

HSP 1 Score: 59.7 bits (143), Expect = 2.710e-10
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAE 52
            R+KEGFS+FG+ ++ ++  GRR L+QW L+P LDL V+N R + +  F  +E
Sbjct:   23 RAKEGFSVFGMMNKCVTPMGRRLLRQWFLRPILDLEVLNYRLNSISFFQCSE 74          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: A0A1M2W1Z0_TRAPU (MutS protein-like protein n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2W1Z0_TRAPU)

HSP 1 Score: 63.2 bits (152), Expect = 3.040e-10
Identity = 25/53 (47.17%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAEN 53
            ++KEG S+FG+ + T +  GR  +++W L+PS+ L VIN+R D VE F+RA+N
Sbjct:  295 KTKEGLSLFGILNNTKTTLGRALMREWFLRPSMSLVVINARHDAVECFTRADN 347          
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Match: A0A5J5EXV5_9PEZI (Muts domain V-domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5EXV5_9PEZI)

HSP 1 Score: 62.4 bits (150), Expect = 5.700e-10
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSRAEN 53
            R KEG S+FG+ + T S  G R LKQW L+PSL + VIN RQ+ V +  RA+N
Sbjct:  265 RGKEGLSLFGIINMTRSPLGHRLLKQWFLRPSLSINVINERQESVAVLLRADN 317          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19370.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3X3Y7_GLOUD4.430e-1250.91MUTSd domain-containing protein n=1 Tax=Globispora... [more]
UPI00044492AE6.380e-1147.17hypothetical protein n=1 Tax=Stereum hirsutum (str... [more]
A0A7S3Q5I7_9STRA8.750e-1158.33Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
UPI0004623A641.190e-1047.17MutS family protein MSH5 n=1 Tax=Trametes versicol... [more]
D7FKD9_ECTSI2.220e-1058.18MutS protein homolog 5 n=1 Tax=Ectocarpus siliculo... [more]
A0A167PIB9_PHYB82.230e-1050.91DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A8K1C711_PYTOL2.230e-1051.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A392PL58_9FABA2.710e-1046.15DNA mismatch repair protein MSH5-like (Fragment) n... [more]
A0A1M2W1Z0_TRAPU3.040e-1047.17MutS protein-like protein n=1 Tax=Trametes pubesce... [more]
A0A5J5EXV5_9PEZI5.700e-1052.83Muts domain V-domain-containing protein n=1 Tax=Sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1420.10coord: 1..55
e-value: 6.3E-15
score: 57.9
IPR007696DNA mismatch repair protein MutS, corePFAMPF05192MutS_IIIcoord: 4..52
e-value: 1.9E-13
score: 51.1
IPR036187DNA mismatch repair protein MutS, core domain superfamilySUPERFAMILY48334DNA repair protein MutS, domain IIIcoord: 3..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19370contigP-wetherbeei_contig19370:245..902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19370.1.1mRNA_P-wetherbeei_contig19370.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19370 245..902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19370.1.1 ID=prot_P-wetherbeei_contig19370.1.1|Name=mRNA_P-wetherbeei_contig19370.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=55bp
RSKEGFSIFGVYDRTISKPGRRCLKQWMLKPSLDLAVINSRQDGVELFSR
AENAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007696DNA_mismatch_repair_MutS_core
IPR036187DNA_mismatch_repair_MutS_sf