prot_P-wetherbeei_contig19308.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19308.1.1
Unique Nameprot_P-wetherbeei_contig19308.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length47
Homology
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: A0A6J1IEM0_CUCMA (PHD finger protein EHD3-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IEM0_CUCMA)

HSP 1 Score: 60.8 bits (146), Expect = 1.390e-9
Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 0
Query:   13 VVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSCEA 47
            +V CDGCD  YH+ C++PPLAA P+G+W+C+ CEA
Sbjct:  509 IVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEA 543          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: A0A6J1DJP9_MOMCH (PHD finger protein EHD3 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1DJP9_MOMCH)

HSP 1 Score: 60.5 bits (145), Expect = 1.910e-9
Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 0
Query:   13 VVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSCEA 47
            +V CDGCD  YH+ C++PPLAA P+G+W+C+ CEA
Sbjct:  502 IVLCDGCDHGYHIYCMRPPLAAIPKGKWFCDKCEA 536          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: A0A7S0PN12_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PN12_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 2.610e-9
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0
Query:   13 VVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSC 45
            V+ CD CD EYH+KCL PPL A+P GEW+C  C
Sbjct:  894 VLLCDSCDAEYHIKCLDPPLLAEPEGEWFCPKC 926          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: Q01B57_OSTTA (Zinc finger, PHD-finger n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q01B57_OSTTA)

HSP 1 Score: 60.1 bits (144), Expect = 2.610e-9
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0
Query:   13 VVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSC 45
            V+ CD CD EYH KCL PPL+A+P GEW+C +C
Sbjct:  917 VLLCDSCDAEYHTKCLDPPLSAEPEGEWFCPTC 949          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: A0A150GWG0_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GWG0_GONPE)

HSP 1 Score: 60.1 bits (144), Expect = 2.610e-9
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0
Query:   11 RAVVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSCE 46
            R ++ CDGCDT +HL CLQPPLAA PRG W C +C+
Sbjct: 1159 RRMLLCDGCDTGWHLGCLQPPLAAVPRGTWVCGACK 1194          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: A0A1S4AUU1_TOBAC (methyl-CpG-binding domain-containing protein 9-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4AUU1_TOBAC)

HSP 1 Score: 59.7 bits (143), Expect = 3.570e-9
Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 0
Query:   13 VVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSCE 46
            V+ CDGCD+EYH  CL PPL   P GEWYC SCE
Sbjct: 1072 VLLCDGCDSEYHTYCLDPPLIKVPDGEWYCPSCE 1105          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: A0A1S3XP19_TOBAC (LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing protein 9-like n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S3XP19_TOBAC)

HSP 1 Score: 59.7 bits (143), Expect = 3.570e-9
Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 0
Query:   13 VVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSCE 46
            V+ CDGCD+EYH  CL PPL   P GEWYC SCE
Sbjct: 1214 VLLCDGCDSEYHTYCLDPPLIKVPDGEWYCPSCE 1247          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: T1NJD4_TRIUA (Uncharacterized protein n=3 Tax=Triticum TaxID=4564 RepID=T1NJD4_TRIUA)

HSP 1 Score: 59.3 bits (142), Expect = 4.880e-9
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0
Query:   13 VVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSC 45
            V+ CDGCD+EYH+ CL+PPLA  PRG+W+C  C
Sbjct: 1037 VLLCDGCDSEYHIYCLKPPLACIPRGDWFCPPC 1069          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: A4RVV6_OSTLU (Uncharacterized protein n=3 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RVV6_OSTLU)

HSP 1 Score: 58.5 bits (140), Expect = 9.120e-9
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 0
Query:   13 VVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSC 45
            V+ CD CD EYH KCL PPL A+P GEW+C +C
Sbjct:  940 VLLCDSCDGEYHAKCLDPPLLAEPEGEWFCPTC 972          
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Match: A0A2K1L4D6_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L4D6_PHYPA)

HSP 1 Score: 57.8 bits (138), Expect = 1.710e-8
Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 0
Query:    3 CDARGVP--WRAVVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSCEA 47
            C A GV   + +++ CDGCD EYH+ CL PPL   P+G W+C SC A
Sbjct: 1870 CRACGVDEDYDSILLCDGCDAEYHIYCLVPPLERVPKGNWFCPSCVA 1916          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19308.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6J1IEM0_CUCMA1.390e-960.00PHD finger protein EHD3-like n=3 Tax=Cucurbita Tax... [more]
A0A6J1DJP9_MOMCH1.910e-960.00PHD finger protein EHD3 n=1 Tax=Momordica charanti... [more]
A0A7S0PN12_9CHLO2.610e-963.64Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
Q01B57_OSTTA2.610e-963.64Zinc finger, PHD-finger n=2 Tax=Ostreococcus tauri... [more]
A0A150GWG0_GONPE2.610e-963.89Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A1S4AUU1_TOBAC3.570e-967.65methyl-CpG-binding domain-containing protein 9-lik... [more]
A0A1S3XP19_TOBAC3.570e-967.65LOW QUALITY PROTEIN: methyl-CpG-binding domain-con... [more]
T1NJD4_TRIUA4.880e-963.64Uncharacterized protein n=3 Tax=Triticum TaxID=456... [more]
A4RVV6_OSTLU9.120e-963.64Uncharacterized protein n=3 Tax=Ostreococcus sp. '... [more]
A0A2K1L4D6_PHYPA1.710e-851.06Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 2..46
e-value: 1.5E-6
score: 37.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..47
e-value: 6.4E-15
score: 56.8
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 3..46
e-value: 4.7E-11
score: 42.4
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 1..47
score: 8.778
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 3..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19308contigP-wetherbeei_contig19308:642..782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19308.1.1mRNA_P-wetherbeei_contig19308.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19308 624..782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19308.1.1 ID=prot_P-wetherbeei_contig19308.1.1|Name=mRNA_P-wetherbeei_contig19308.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=47bp
MACDARGVPWRAVVCCDGCDTEYHLKCLQPPLAAQPRGEWYCNSCEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD