prot_P-wetherbeei_contig19262.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19262.1.1
Unique Nameprot_P-wetherbeei_contig19262.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length63
Homology
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: A0A836CML4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML4_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 7.200e-17
Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 ERTTDAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGAR 56
            ++ +++GVI +I  +NFMCH +LT+DL R +NFINGSNG+GKSAILAALQICLGAR
Sbjct:   69 KQISESGVILRIDVKNFMCHRHLTVDLCRNINFINGSNGSGKSAILAALQICLGAR 124          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: A0A7S4ALY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALY8_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.000e-16
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    2 RTTDAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGA 55
            +  +AG++T+I  +NFMCH  LT+DL+R +NFI G NG+GKSAILAA+QICLGA
Sbjct:  103 KPAEAGILTRIYVENFMCHRKLTVDLNRNINFIYGQNGSGKSAILAAIQICLGA 156          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: A0A448ZJ22_9STRA (SMC_N domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJ22_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.830e-16
Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    5 DAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGA 55
            +AGVIT+I A+NFMCH  LT+DL+R VNFI G NG+GKSAILAA+QICLGA
Sbjct:  114 EAGVITRIYAENFMCHRKLTVDLNRNVNFIYGQNGSGKSAILAAIQICLGA 164          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: A0A7S1VYB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VYB1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.110e-16
Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    5 DAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGA 55
            +AGVI +I  +NFMCH  LT++L + VNFING+NG+GKSAILAA+QICLGA
Sbjct:  101 EAGVIKKIYVENFMCHRKLTVELCQNVNFINGANGSGKSAILAAVQICLGA 151          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: F0YEV5_AURAN (SMC_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEV5_AURAN)

HSP 1 Score: 74.3 bits (181), Expect = 9.910e-16
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 ERTTDAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGA 55
            + ++ AG+I +I  ++FMCH  LTI   RR+NFING+NG+GKSAILAALQICLGA
Sbjct:    6 DSSSSAGIIHEIYCEHFMCHKKLTIKPCRRINFINGANGSGKSAILAALQICLGA 60          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: A0A7S4NJE4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NJE4_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.190e-15
Identity = 35/54 (64.81%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    2 RTTDAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGA 55
            +  +AGVIT++  +NFMCH  LT+DL R VNFI+G NG+GKSA+LAA+QICLGA
Sbjct:  197 KAAEAGVITRVYVENFMCHRKLTVDLCRNVNFIHGQNGSGKSAVLAAVQICLGA 250          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 4.150e-15
Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 ERTTDAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGAR 56
            ++ ++AGV+ +I   NFMCH  LT+ L ++VNFING NG+GKSAILAALQICLGA+
Sbjct:  171 KKKSEAGVVLKINVSNFMCHRKLTVPLCKQVNFINGRNGSGKSAILAALQICLGAK 226          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: A0A8J2X4G0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4G0_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.740e-15
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 ERTTDAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGA 55
            E ++ AG+I +I  +NFMCH  L I L RR+NFING+NG+GKSAILAA+QICLGA
Sbjct:   95 EDSSSAGLIKEIYCENFMCHKKLEIKLGRRINFINGANGSGKSAILAAMQICLGA 149          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: A0A6V2GEJ9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GEJ9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.050e-14
Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    5 DAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGA 55
            +AGVI +I  +NFMCH  LT++L + VNFING+NG+GKSAILAA+QICLGA
Sbjct:  101 EAGVIKKIYVENFMCHRKLTVELCQNVNFINGANGSGKSAILAAVQICLGA 151          
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Match: A0A7S4RG96_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RG96_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.430e-14
Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    5 DAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQICLGA 55
            +AGVI +I  +NFMCH  LT++L + VNFING+NG+GKSAILAA+QICLGA
Sbjct:  101 EAGVIKKIYVENFMCHRKLTVELCQNVNFINGANGSGKSAILAAVQICLGA 151          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19262.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CML4_9STRA7.200e-1767.86P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4ALY8_9STRA1.000e-1662.96Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A448ZJ22_9STRA1.830e-1674.51SMC_N domain-containing protein n=1 Tax=Pseudo-nit... [more]
A0A7S1VYB1_9STRA8.110e-1668.63Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
F0YEV5_AURAN9.910e-1663.64SMC_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S4NJE4_9STRA1.190e-1564.81Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
D7G4M2_ECTSI4.150e-1562.50Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A8J2X4G0_9STRA7.740e-1565.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6V2GEJ9_9STRA1.050e-1468.63Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RG96_9STRA1.430e-1468.63Hypothetical protein (Fragment) n=3 Tax=Ditylum br... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038729Rad50/SbcC-type AAA domainPFAMPF13476AAA_23coord: 12..55
e-value: 1.3E-12
score: 48.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 8..61
e-value: 2.6E-14
score: 55.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..57
NoneNo IPR availablePANTHERPTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6coord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19262contigP-wetherbeei_contig19262:1009..1197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19262.1.1mRNA_P-wetherbeei_contig19262.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19262 1009..1197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19262.1.1 ID=prot_P-wetherbeei_contig19262.1.1|Name=mRNA_P-wetherbeei_contig19262.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=63bp
ERTTDAGVITQIRAQNFMCHHNLTIDLHRRVNFINGSNGAGKSAILAALQ
ICLGARCASPSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038729Rad50/SbcC_AAA
IPR027417P-loop_NTPase