prot_P-wetherbeei_contig19245.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19245.1.1
Unique Nameprot_P-wetherbeei_contig19245.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length183
Homology
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BLAST of mRNA_P-wetherbeei_contig19245.1.1 vs. uniprot
Match: A0A2V0P6H4_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P6H4_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 9.630e-7
Identity = 40/116 (34.48%), Postives = 53/116 (45.69%), Query Frame = 0 
Query:   22 VTTLWVTAC--AQNRRRTSPAACWPLFAPLPALPRPFPEARRPRVCLSLYPPTIRTAMTALVESMGGRCSCRLVRGETTHLVAPRPEGPKVADARQWGSVRIVSERWLLHVARNGY 135
            VT  W+ AC  AQ +  T P    P    +              VC + +    R  + A V + GG  S  L +G  THLV  RPEGPK A A++WG+VRI +  WL      G+
Sbjct:   90 VTREWLDACVEAQAQLPTDPYRAGPFTGLV--------------VCGTNFTLQQRQEVEAAVVAGGGAFSPELHKGVCTHLVCLRPEGPKYAAAKKWGTVRITTAEWLRRSVLQGF 191
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19245.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V0P6H4_9CHLO9.630e-734.48Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 53..134
e-value: 1.0E-4
score: 31.7
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 63..126
e-value: 3.3E-13
score: 49.4
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 74..128
score: 10.5576
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 61..148
e-value: 3.2E-15
score: 58.2
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 21..135
NoneNo IPR availablePANTHERPTHR13561DNA REPLICATION REGULATOR DPB11-RELATEDcoord: 19..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19245contigP-wetherbeei_contig19245:81..629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19245.1.1mRNA_P-wetherbeei_contig19245.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19245 80..629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19245.1.1 ID=prot_P-wetherbeei_contig19245.1.1|Name=mRNA_P-wetherbeei_contig19245.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp
LAADAAALLESPEAAGGPSAAVTTLWVTACAQNRRRTSPAACWPLFAPLP
ALPRPFPEARRPRVCLSLYPPTIRTAMTALVESMGGRCSCRLVRGETTHL
VAPRPEGPKVADARQWGSVRIVSERWLLHVARNGYEDGCEAAFALADEPT
GGAPAAAIASASCTTASDAIAAGSGGGDGGSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf