prot_P-wetherbeei_contig19225.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19225.1.1
Unique Nameprot_P-wetherbeei_contig19225.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length395
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig19225.1.1 vs. uniprot
Match: UPI00166310F2 (site-specific integrase n=1 Tax=Roseomonas lacus TaxID=287609 RepID=UPI00166310F2)

HSP 1 Score: 95.9 bits (237), Expect = 9.010e-18
Identity = 95/370 (25.68%), Postives = 152/370 (41.08%), Query Frame = 0 
Query:    4 WNEARENCVNWPSIKAECELKRLWYTPPLTDYPQRLRDQIDELIEAWLRGGPGTGSR--CGLSGESVNDTLDMLRRFLHGLCDEGGFQPSSIISLEVALATDHVRLGLNFHLKRQDGRLTPALYNMACLLRRILRFQLKAPKAQLAAVTELVGKLNPKHKNVPKSVI-ELFLKFKSTNLLSRLDGLGEQILRRYEWRRSTTIKEGIEIRCALAVELLLSTAEARNTLSAVWIGREAL--PGHGYIAGDCYKPARGRMRDPVPLYETAARLLELYNRLGRPR-RALASEWLFPGASAG-PMNADVLGRQMTQFVQRELNERLTPSQLRYAVGAIYLLSTPDKLADSDKLEDVRRLLGHVSIVNTRRAFKAL 366
            WN A +    WP  +      RL ++PPLT YPQ LRD I+   E WL G     +R    L   S+   L  LR +L  L  E G  P+S++ L   +     R+ L    +R   + T   + MA L+ +I ++  K P+  +  +  ++ +L P H  + K     +    +  + L RL  L   ++ +         +     + A+  ++LL        L  + +G   +  PG            +  +R   PL +  A+ +E Y    RP      ++WLFPGA  G P   + L  Q+ +    +    LTP   R   G  YL    D+ A       V+R+LGH S+  T   +  L
Sbjct:  181 WNTAADLHPAWPQCRLGVPDHRLTFSPPLTAYPQTLRDHIERWRE-WLGGDDPFTNRPFSALRATSMATRLRQLRTYLGALI-ESGVDPASMVDLAGVVTPAMARVALRVLWERAGQKSTAHTFQMAALVLQIGKYWAKLPEPDVETLRNMMRQLRPAHTGMSKRTEGRVRAAVEDQDRLDRLLTLPGALMDKACRAGPPGQRLAQMAQTAILADILLHLPMRLKNLGGLRLGVHLIRGPGKSITVDIPAAETKNELRITGPLPKDVAKRMEAYIDRFRPLLNPGGTDWLFPGAVPGQPKTGEALRSQIRKAATTQCGLMLTPHDFRSLTG--YLTLRDDRGAHGK----VQRILGHKSLATTMAHYSGL 542
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19225.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00166310F29.010e-1825.68site-specific integrase n=1 Tax=Roseomonas lacus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 199..367
e-value: 4.2E-7
score: 31.8
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 250..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19225contigP-wetherbeei_contig19225:102..1286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19225.1.1mRNA_P-wetherbeei_contig19225.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19225 102..1286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19225.1.1 ID=prot_P-wetherbeei_contig19225.1.1|Name=mRNA_P-wetherbeei_contig19225.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=395bp
CGAWNEARENCVNWPSIKAECELKRLWYTPPLTDYPQRLRDQIDELIEAW
LRGGPGTGSRCGLSGESVNDTLDMLRRFLHGLCDEGGFQPSSIISLEVAL
ATDHVRLGLNFHLKRQDGRLTPALYNMACLLRRILRFQLKAPKAQLAAVT
ELVGKLNPKHKNVPKSVIELFLKFKSTNLLSRLDGLGEQILRRYEWRRST
TIKEGIEIRCALAVELLLSTAEARNTLSAVWIGREALPGHGYIAGDCYKP
ARGRMRDPVPLYETAARLLELYNRLGRPRRALASEWLFPGASAGPMNADV
LGRQMTQFVQRELNERLTPSQLRYAVGAIYLLSTPDKLADSDKLEDVRRL
LGHVSIVNTRRAFKALLQAASFEGFDRRMAARQGRVYGGGAAHV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz