prot_P-wetherbeei_contig19185.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19185.1.1
Unique Nameprot_P-wetherbeei_contig19185.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length257
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A345ZWJ4_9HYPH (IclR family transcriptional regulator n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZWJ4_9HYPH)

HSP 1 Score: 384 bits (985), Expect = 1.270e-132
Identity = 206/255 (80.78%), Postives = 225/255 (88.24%), Query Frame = 0 
Query:    1 MDRHTANDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 255
            M R   NDKSQVQVIARAA ILRALEDEN+GLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDF+SLARP LERLSAEL ETVDLSTVKKDHLVFIDQV+GS RLRTVS VGETFPL+CTANGK+YLAQLSD+AV ALIG +YE RT +++T +D LL ELK +R  GVAFDREEHT GICAAGVAL DPLGN+VAISVPVP+ RF ++   IAE+LLATK  LE RM ++A
Sbjct:    5 MSRLVTNDKSQVQVIARAATILRALEDENAGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFVSLARPFLERLSAELHETVDLSTVKKDHLVFIDQVVGSQRLRTVSGVGETFPLHCTANGKAYLAQLSDSAVEALIGRSYEARTARSITKIDTLLNELKVVRRIGVAFDREEHTEGICAAGVALHDPLGNAVAISVPVPSLRFANQANHIAERLLATKRALEGRMNASA 259
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A140GW30_9HYPH (IclR family transcriptional regulator n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GW30_9HYPH)

HSP 1 Score: 349 bits (896), Expect = 3.600e-119
Identity = 183/249 (73.49%), Postives = 216/249 (86.75%), Query Frame = 0 
Query:    7 NDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 255
            +DK+QVQVIARAA ILRALE E++GLSLGQIA RV LARSTVQRIVA+LETEKL+IAA+PNGRVRLGP I+RLA+SV  DF++ ARP L RLS EL ETVDL+TV++DHL+FIDQVIGSHRLRTVSAVGETFPLYCTANGK+YL+ L +  V  LIG++YE RTP TLT L ALLAEL+T+R  G+A+DREEHTLGICA GVAL DPLGN+VAISVPVP+ RF+ +Q LIAE+LLATKH +++   +AA
Sbjct:    5 SDKNQVQVIARAAHILRALEGEDAGLSLGQIAARVGLARSTVQRIVASLETEKLLIAASPNGRVRLGPAILRLASSVTGDFVARARPHLMRLSEELCETVDLATVRRDHLMFIDQVIGSHRLRTVSAVGETFPLYCTANGKAYLSSLDELEVEQLIGKSYEARTPNTLTKLPALLAELRTVRKNGIAYDREEHTLGICAVGVALHDPLGNAVAISVPVPSQRFREQQRLIAERLLATKHAMQADWSAAA 253
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A1Q4DJG4_9HYPH (Uncharacterized protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DJG4_9HYPH)

HSP 1 Score: 346 bits (888), Expect = 7.570e-118
Identity = 186/249 (74.70%), Postives = 210/249 (84.34%), Query Frame = 0 
Query:    7 NDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 255
            ++ SQVQVIARAA ILRALEDE  GLSLGQIAQRV LARSTVQRIVAALE EKL+IAATPNGRVRLGP I+RLAASVRSDF+  ARP L RLS EL+ETVDL+TVKKDHL+FIDQV+GS RLRT +AVGETFPL+CTANGK+YLA+L++  V ALIG  Y  RTPKT+T LD LLAEL TIR  GVAFDREEHTLGI A GVA+ DPLGN VAISVPVPT RF +RQ  IAE+L+ATK  L +++ + A
Sbjct:   12 SENSQVQVIARAACILRALEDETHGLSLGQIAQRVGLARSTVQRIVAALEGEKLLIAATPNGRVRLGPAILRLAASVRSDFVHQARPFLTRLSQELQETVDLATVKKDHLIFIDQVVGSQRLRTEAAVGETFPLHCTANGKAYLAKLTNEQVEALIGRDYAERTPKTITRLDPLLAELATIRKIGVAFDREEHTLGISAVGVAMHDPLGNPVAISVPVPTPRFVNRQTQIAERLMATKRALLAQLNAKA 260
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A6L5FI52_9HYPH (Helix-turn-helix domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FI52_9HYPH)

HSP 1 Score: 345 bits (885), Expect = 1.950e-117
Identity = 184/248 (74.19%), Postives = 209/248 (84.27%), Query Frame = 0 
Query:    7 NDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSA 254
            +DKSQVQVIARAAAILRALED+ SGLSLGQIAQRV+LARSTVQRIVAALE EKLVIAA+PNGRVRLGPTI+RLAASVR+DF+SLA P L +LS EL ETVDL+ VK+DHLVF+DQVIG  RLRTVSAVG++FPLYCTANGK+YLAQL    +  LIG TYE RTPKTLT LD LL +L  +R +GVA+DREEHTLGICAAGVAL+D LGN VA+SVPVP  RF+  Q  IA +LLATK  L   + +A
Sbjct:   10 SDKSQVQVIARAAAILRALEDQASGLSLGQIAQRVDLARSTVQRIVAALEAEKLVIAASPNGRVRLGPTILRLAASVRTDFVSLAHPFLVKLSHELRETVDLAVVKRDHLVFVDQVIGPQRLRTVSAVGDSFPLYCTANGKAYLAQLERPVIEQLIGRTYEKRTPKTLTRLDDLLKDLDAVRKSGVAYDREEHTLGICAAGVALRDALGNYVAVSVPVPAQRFKENQEPIAGRLLATKRALADDLSAA 257
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A327KVD0_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KVD0_9HYPH)

HSP 1 Score: 341 bits (875), Expect = 6.700e-116
Identity = 177/248 (71.37%), Postives = 214/248 (86.29%), Query Frame = 0 
Query:    8 DKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 255
            ++  VQVI RAAAILRALED+ +GLSLGQIAQRV+LARSTVQRIVAALE EKL+IAA+PNGRVRLGPT++RLAASV+SDF+SL RP L RLS EL ETVDL+ V++D +VFIDQV+GS RLRTVSAVGETFPLYCTANGK+YLAQL + A+  LIG +Y  RTP TLT+LD+L+ +L+ +R +GVAFDREEHT+G+CAAGV L+D LGN VAISVPVP  RF   +A IAE+LLATKH +ES++++AA
Sbjct:   11 ERGPVQVITRAAAILRALEDQPAGLSLGQIAQRVDLARSTVQRIVAALEAEKLLIAASPNGRVRLGPTLLRLAASVQSDFVSLCRPYLLRLSNELRETVDLAAVRRDGMVFIDQVVGSQRLRTVSAVGETFPLYCTANGKAYLAQLGNDAIEQLIGRSYPARTPHTLTSLDSLVQDLRRVRRSGVAFDREEHTVGVCAAGVVLRDTLGNYVAISVPVPAQRFVDHEAAIAERLLATKHAVESQLEAAA 258
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A327KZS6_9HYPH (Uncharacterized protein n=2 Tax=Rhodoplanes TaxID=29407 RepID=A0A327KZS6_9HYPH)

HSP 1 Score: 336 bits (861), Expect = 9.020e-114
Identity = 175/248 (70.56%), Postives = 209/248 (84.27%), Query Frame = 0 
Query:    8 DKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESRMKSAA 255
            ++  VQVI RAA+ILRALED+ +GLSLGQIAQRV+LARSTVQRIVAALE EKL+IAA+P GRVRLGPT++RLA+SV+SDF+SL RP L +LSAEL ETVDL+ +K+D+L+F+DQVIGS RLR VS+VGETFPLYCTANGK+YLAQL + AV  L+G +Y  RTP TLTT DALL +L+ IR  GVAFDREEHT+G+CAAGV L+D LGN +AISVPVP  RF  RQ  IAE LLATK  LE +++SAA
Sbjct:   11 ERGPVQVITRAASILRALEDQPAGLSLGQIAQRVDLARSTVQRIVAALEAEKLLIAASPTGRVRLGPTLLRLASSVQSDFVSLCRPWLVKLSAELSETVDLAAIKRDYLIFLDQVIGSQRLRAVSSVGETFPLYCTANGKAYLAQLGNDAVEELVGRSYPARTPTTLTTYDALLQDLRRIRRTGVAFDREEHTVGVCAAGVVLRDSLGNYLAISVPVPAQRFYDRQTEIAEHLLATKRALEDQLESAA 258
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A1W6ZT89_9HYPH (Uncharacterized protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZT89_9HYPH)

HSP 1 Score: 324 bits (830), Expect = 5.530e-109
Identity = 172/243 (70.78%), Postives = 199/243 (81.89%), Query Frame = 0 
Query:    8 DKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESR 250
            +KSQVQVIARAAAI+RALED  +GLSLG+IA +V LARSTVQRIVAALETEKLV+AA+P GRVRLGPTI+RLA SVR+DF ++A+P L  LS EL ETVDL+++K DHLVFIDQVIGS RLRTVSAVGE FPLYCTANGK+YLAQL D  +  LIG+ Y+ RTP TLT L  LL +++  R  G A DREEH LGICAAGVA++D LGN VAISVPVPT RF+S +A I  +LLATK  LE R
Sbjct:   16 EKSQVQVIARAAAIMRALEDTTTGLSLGEIALKVGLARSTVQRIVAALETEKLVVAASPAGRVRLGPTILRLAGSVRTDFATIAKPFLVELSKELHETVDLASIKGDHLVFIDQVIGSQRLRTVSAVGEAFPLYCTANGKAYLAQLDDAQIETLIGKIYKARTPSTLTKLSQLLDDIRAARRDGYAIDREEHALGICAAGVAMRDMLGNYVAISVPVPTQRFESERANICARLLATKRVLEDR 258
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A6N7H121_9HYPH (Helix-turn-helix domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H121_9HYPH)

HSP 1 Score: 322 bits (826), Expect = 1.700e-108
Identity = 173/247 (70.04%), Postives = 198/247 (80.16%), Query Frame = 0 
Query:    1 MDRHTANDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHEL 247
            MD    N K+Q+QVIARAAAILRALE++ +GLSL QIAQ V LARSTVQRIVAALE EKLVIAA+P GRVRLGPTI RLA SV +DF+S ARP L +LS EL ETVDL+T+  DHLVF+DQV G  RLR VSAVGE FPL+CTANGK+YLA+LSD  VA LIG+TYE RTPKTLT L  LL +LK +R +GVA DREEHTLGICAAG+ + D +GN VAISVPVP  RF ++QA IA+ LL TK  L
Sbjct:    1 MDVRLPNGKNQIQVIARAAAILRALENQAAGLSLAQIAQHVGLARSTVQRIVAALEAEKLVIAASPTGRVRLGPTIQRLATSVGADFVSAARPFLVKLSQELNETVDLATIHNDHLVFVDQVTGPQRLRAVSAVGEAFPLHCTANGKAYLAELSDEEVARLIGKTYEQRTPKTLTRLKDLLKDLKMVRKSGVALDREEHTLGICAAGIVMTDFVGNHVAISVPVPAQRFATQQARIAKSLLTTKRAL 247
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: UPI0010BE2E1C (IclR family transcriptional regulator n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI0010BE2E1C)

HSP 1 Score: 310 bits (793), Expect = 1.770e-103
Identity = 159/234 (67.95%), Postives = 197/234 (84.19%), Query Frame = 0 
Query:    8 DKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLL 241
            DKS VQVIARA +ILR+LED+ SGLSLG+IA RV+LARSTVQRIVAAL  EK++IAA+PNGRVRLGPTI+RLA+SV +DF ++AR  ++ LS +L ETVD++T+K DHLVF+DQV+G HRL+ VSAVGE FPL+CTANGK+YLAQL D+ V  L+G T+E RT  ++T L  LL ELKTIR +GVAFDREEHT+GICA GVAL+DP+GN +AISVPVP  RF+ R+  +AE+LL
Sbjct:   12 DKSPVQVIARAISILRSLEDQPSGLSLGEIAARVHLARSTVQRIVAALAAEKVLIAASPNGRVRLGPTILRLASSVPNDFATMARSYVQALSKKLGETVDIATIKGDHLVFVDQVVGPHRLKAVSAVGEAFPLHCTANGKAYLAQLDDSEVEKLLGRTFEKRTSNSITDLPTLLKELKTIRKSGVAFDREEHTVGICAVGVALRDPVGNPIAISVPVPEPRFRGREHFLAEQLL 245
[Close]
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Match: A0A502FSH9_9PROT (IclR family transcriptional regulator n=4 Tax=Roseomonas TaxID=125216 RepID=A0A502FSH9_9PROT)

HSP 1 Score: 303 bits (775), Expect = 1.540e-100
Identity = 157/243 (64.61%), Postives = 193/243 (79.42%), Query Frame = 0 
Query:    8 DKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSAELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYLAQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHTLGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESR 250
            +K+Q+QVI RAAA+LR+LE++  GLSLGQIA +V LARSTVQRIVAALE+EKLV+AATP GRVRLGP ++RLAASV ++  +LA P +  LSA L ETVD + V++DHL+F+DQV+G  RL+ VSAVGETFPLYCTANGK+YLA LSD  + ALIG +Y  RTP TLTT + LL E++  R AG A DREEH LGI A GVAL+D +GN VA+SVPVPT RF+ R+  IAE+LL TK  L +R
Sbjct:   22 EKNQIQVIGRAAAVLRSLENQPHGLSLGQIAAKVELARSTVQRIVAALESEKLVVAATPGGRVRLGPALLRLAASVETNVAALAHPFIAELSASLGETVDFAAVRRDHLIFVDQVVGMQRLQAVSAVGETFPLYCTANGKAYLATLSDDEIVALIGRSYARRTPNTLTTAEPLLEEIRAARQAGFAVDREEHVLGISAVGVALRDMMGNPVAVSVPVPTQRFRGREEDIAERLLETKRALGAR 264
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19185.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A345ZWJ4_9HYPH1.270e-13280.78IclR family transcriptional regulator n=2 Tax=Pseu... [more]
A0A140GW30_9HYPH3.600e-11973.49IclR family transcriptional regulator n=1 Tax=Rhod... [more]
A0A1Q4DJG4_9HYPH7.570e-11874.70Uncharacterized protein n=1 Tax=Rhizobiales bacter... [more]
A0A6L5FI52_9HYPH1.950e-11774.19Helix-turn-helix domain-containing protein n=1 Tax... [more]
A0A327KVD0_9HYPH6.700e-11671.37Uncharacterized protein n=1 Tax=Rhodoplanes elegan... [more]
A0A327KZS6_9HYPH9.020e-11470.56Uncharacterized protein n=2 Tax=Rhodoplanes TaxID=... [more]
A0A1W6ZT89_9HYPH5.530e-10970.78Uncharacterized protein n=1 Tax=Pseudorhodoplanes ... [more]
A0A6N7H121_9HYPH1.700e-10870.04Helix-turn-helix domain-containing protein n=1 Tax... [more]
UPI0010BE2E1C1.770e-10367.95IclR family transcriptional regulator n=1 Tax=Pseu... [more]
A0A502FSH9_9PROT1.540e-10064.61IclR family transcriptional regulator n=4 Tax=Rose... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005471Transcription regulator IclR, N-terminalSMARTSM00346iclrneucoord: 12..100
e-value: 2.6E-21
score: 86.8
IPR005471Transcription regulator IclR, N-terminalPFAMPF09339HTH_IclRcoord: 15..61
e-value: 1.1E-11
score: 44.4
IPR005471Transcription regulator IclR, N-terminalPROSITEPS51077HTH_ICLRcoord: 12..74
score: 15.115801
IPR014757Transcription regulator IclR, C-terminalPFAMPF01614IclRcoord: 127..244
e-value: 2.6E-28
score: 98.4
IPR014757Transcription regulator IclR, C-terminalPROSITEPS51078ICLR_EDcoord: 75..256
score: 33.324509
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 6..79
e-value: 6.6E-19
score: 69.2
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 80..252
e-value: 9.7E-46
score: 157.5
NoneNo IPR availablePANTHERPTHR30136:SF24HTH-TYPE TRANSCRIPTIONAL REPRESSOR ALLRcoord: 3..250
NoneNo IPR availablePANTHERPTHR30136HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILYcoord: 3..250
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 71..251
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 12..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19185contigP-wetherbeei_contig19185:354..1124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19185.1.1mRNA_P-wetherbeei_contig19185.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19185 345..1124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19185.1.1 ID=prot_P-wetherbeei_contig19185.1.1|Name=mRNA_P-wetherbeei_contig19185.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp
MDRHTANDKSQVQVIARAAAILRALEDENSGLSLGQIAQRVNLARSTVQR
IVAALETEKLVIAATPNGRVRLGPTIMRLAASVRSDFISLARPMLERLSA
ELEETVDLSTVKKDHLVFIDQVIGSHRLRTVSAVGETFPLYCTANGKSYL
AQLSDTAVAALIGETYEPRTPKTLTTLDALLAELKTIRAAGVAFDREEHT
LGICAAGVALQDPLGNSVAISVPVPTHRFQSRQALIAEKLLATKHELESR
MKSAAG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005471Tscrpt_reg_IclR_N
IPR014757Tscrpt_reg_IclR_C
IPR036388WH-like_DNA-bd_sf
IPR029016GAF-like_dom_sf
IPR036390WH_DNA-bd_sf