prot_P-wetherbeei_contig19122.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig19122.1.1
Unique Nameprot_P-wetherbeei_contig19122.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length89
Homology
BLAST of mRNA_P-wetherbeei_contig19122.1.1 vs. uniprot
Match: D8LS59_ECTSI (Dynein intermediate chain family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS59_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.110e-26
Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 0
Query:    1 VPIGLSETPTEMLLCLRSSVVATDFRDYDKFQREKAEYERRCAERAGSERSVEQHAQTTNWALKNKEVMAATPATKDMSCAVNTWEIFD 89
            + IGL ETPT MLL +R S VATD RD+ ++Q+EK +YE+R  E+ GS+R   +HAQT NWALK KEV AA  ATKD SCA  TWEIFD
Sbjct:  167 ITIGLCETPTMMLLEIRGSAVATDLRDFGRYQQEKQDYEKRVQEKIGSDRFASRHAQTVNWALKTKEVTAAAAATKDASCAATTWEIFD 255          
BLAST of mRNA_P-wetherbeei_contig19122.1.1 vs. uniprot
Match: A0A835YZL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.750e-22
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 VPIGLSETPTEMLLCLRSSVVATDFRDYDKFQREKAEYERRCAERAGSERSVEQHAQTTNWALKNKEVMAATPATKDMSCAVNTWEIFD 89
            V + L ETPT MLL +R S VATDFRDYDK+QREK EY+RR A + GSE + E+H QT NW  K+KE MA    TKD + +V  WEI+D
Sbjct:  245 VTLLLQETPTIMLLEIRGSAVATDFRDYDKYQREKQEYDRRVAAKQGSETAQERHTQTLNWPPKHKEAMAVPAPTKDAAASVLPWEIYD 333          
BLAST of mRNA_P-wetherbeei_contig19122.1.1 vs. uniprot
Match: A0A7S2BXC5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BXC5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.940e-9
Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   38 YERRCAERAGSERSVEQHAQTTNWALKNKEVMAATPATKDMSCAVNTWEIFD 89
            Y+  CAER  S++ V++HAQT N  LK+K+V+AA P T+D+ C+  TW I+D
Sbjct:    6 YKALCAERESSDKYVDRHAQTINLQLKDKQVLAAPPPTRDVGCSAETWSIYD 57          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19122.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS59_ECTSI2.110e-2661.80Dynein intermediate chain family n=1 Tax=Ectocarpu... [more]
A0A835YZL2_9STRA1.750e-2258.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2BXC5_9STRA3.940e-950.00Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19122contigP-wetherbeei_contig19122:440..706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19122.1.1mRNA_P-wetherbeei_contig19122.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig19122 440..706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig19122.1.1 ID=prot_P-wetherbeei_contig19122.1.1|Name=mRNA_P-wetherbeei_contig19122.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp
VPIGLSETPTEMLLCLRSSVVATDFRDYDKFQREKAEYERRCAERAGSER
SVEQHAQTTNWALKNKEVMAATPATKDMSCAVNTWEIFD
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