prot_P-wetherbeei_contig18814.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18814.1.1
Unique Nameprot_P-wetherbeei_contig18814.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length172
Homology
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: A0A4D9DCX4_9STRA (BRCA-2_OB1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCX4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.660e-20
Identity = 66/166 (39.76%), Postives = 87/166 (52.41%), Query Frame = 0
Query:    1 LDDGLSFFARRGRIAIGSKLAVSGAVMDP---DGADPLKMLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRECGFGSGGGSGRGTMRILTEGEEEALQMEHQGVCQ 163
            LD+ LS F R GRI +G+K+A+ GA++      G DPL+ML +           PCL+L INGTR A W+A LGFQ+R +  S G               M   +  L  GGG+ PA++ VV RRY   F E    + G   R   R+L+  EEE  Q  H+GVCQ
Sbjct:   88 LDNFLSAFVRTGRIRVGTKVAICGALLQGLSGGGIDPLEMLDQSA------DARPCLQLVINGTRPARWDAPLGFQRRPSVCSRG--------------VMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERRINAEGE--RLASRVLSVAEEEDAQQRHEGVCQ 231          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: K8Z4D8_NANGC (Breast cancer 2 susceptibility protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4D8_NANGC)

HSP 1 Score: 97.4 bits (241), Expect = 2.110e-20
Identity = 66/166 (39.76%), Postives = 85/166 (51.20%), Query Frame = 0
Query:    1 LDDGLSFFARRGRIAIGSKLAVSGAVMDP---DGADPLKMLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRECGFGSGGGSGRGTMRILTEGEEEALQMEHQGVCQ 163
            LD  LS F R GRI +G+K+A+ GA +      G DPL+ML +           PCL+L INGTR A W+A LGFQ+R +  S G               M   +  L  GGG+ PA++ VV RRY   F E    + G   R   R+L+  EEE  Q  H+GVCQ
Sbjct:  155 LDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSA------DARPCLQLVINGTRPARWDAPLGFQRRPSMCSRG--------------VMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGE--RLASRVLSVAEEEDAQQRHEGVCQ 298          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: W7U0L1_9STRA (DNA recombination/repair BRCA2 like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0L1_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.300e-20
Identity = 66/166 (39.76%), Postives = 85/166 (51.20%), Query Frame = 0
Query:    1 LDDGLSFFARRGRIAIGSKLAVSGAVMDP---DGADPLKMLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRECGFGSGGGSGRGTMRILTEGEEEALQMEHQGVCQ 163
            LD  LS F R GRI +G+K+A+ GA +      G DPL+ML +           PCL+L INGTR A W+A LGFQ+R +  S G               M   +  L  GGG+ PA++ VV RRY   F E    + G   R   R+L+  EEE  Q  H+GVCQ
Sbjct:  568 LDSFLSAFVRTGRIRVGTKVAICGAFLQGLSGGGVDPLEMLDQSA------DARPCLQLVINGTRPARWDAPLGFQRRPSMCSRG--------------VMSTSVSGLVAGGGSAPAIEAVVVRRYATQFMERSLNAEGE--RLASRVLSVAEEEDAQQRHEGVCQ 711          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: A0A1X7T0V7_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T0V7_AMPQE)

HSP 1 Score: 70.5 bits (171), Expect = 4.910e-11
Identity = 53/157 (33.76%), Postives = 70/157 (44.59%), Query Frame = 0
Query:    1 LDDGLSFFARRGRIAIGSKLAVSGAVMDPDGADPLKMLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRECGFGSGGGSGRGTMRILTEGEEEALQME 157
            LD  LS FA RG I +G KLAV GA +  D  +   +   +++ LL         L  N  R A W+A+LG        S                    PL S+ P GG +PA++VV+ RRYP L+ E GF  G G G          EEE ++ E
Sbjct:  269 LDRPLSSFAARGLICVGGKLAVFGAELSGDQTNGHPLEVSKSKLLL---------LNANSVRRAHWSARLGLLPHPVPPS-------------------FPLQSIIPAGGIIPAIEVVIARRYPLLYVERGFSDGDGRGFNGRVFRRRHEEERVERE 397          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: A0A0D2UGS7_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UGS7_CAPO3)

HSP 1 Score: 67.0 bits (162), Expect = 9.010e-10
Identity = 49/131 (37.40%), Postives = 64/131 (48.85%), Query Frame = 0
Query:    1 LDDGLSFFARRGRIAIGSKLAVSGA--VMDPDGADPLKMLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRE 129
            LD  L+   +RG+IA+G+KLA++ A  V   DGA PL+  A +T           LRLT N TR A W A LG+Q R                          L + +P GG + AVDVVV R+YP +F E
Sbjct: 1195 LDRDLAALVQRGKIAVGTKLAIASAELVGPGDGAGPLEPGAAKTS----------LRLTANATRRARWWASLGYQGR--------------------PPFFTALSTASPTGGAIAAVDVVVLRQYPAVFIE 1295          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: B5YME7_THAPS (Breast cancer 2 early onset (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YME7_THAPS)

HSP 1 Score: 65.1 bits (157), Expect = 2.570e-9
Identity = 61/172 (35.47%), Postives = 84/172 (48.84%), Query Frame = 0
Query:    1 LDDGLSFFARRGRIAIGSKLAVSGA--VMDPDGADPLK---MLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRECGFGSGGGSGRGTMRILTEGEEEALQMEHQGVCQRAAE 167
            +D+ L  F    RIA+GSKL +     V   DG +PL      ++R   LL       L ++ N +R A W+A LGF  R  +           + GG+   +V  L  +  GGGTVPA+D+VV ++YPR+F E   G       G    LTE EE A Q E+    QRA+E
Sbjct:  120 VDEILLKFVEERRIAVGSKLMICNGQLVGSDDGVEPLDDSYSSSKRDCPLL-------LGISANNSRLARWDATLGFVPRNNSN----------LYGGN--LLVKSLQDIFIGGGTVPAIDLVVCKKYPRMFLEQLNG-------GASIHLTEAEEAARQSEYDSRHQRASE 265          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: G0SX58_RHOT2 (Rad51-associated protein Brh2 n=2 Tax=Rhodosporidium toruloides TaxID=5286 RepID=G0SX58_RHOT2)

HSP 1 Score: 64.3 bits (155), Expect = 7.430e-9
Identity = 46/139 (33.09%), Postives = 63/139 (45.32%), Query Frame = 0
Query:    1 LDDGLSFFARRGRIAIGSKLAVSGAVMD---PDGADPLKMLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRECGFGSGG 136
            +D  L     RG+I +GSK+AV GA +D    +G+D L+ L R T           L +T N T  A W+AKLGF+                         V  L S++P GG VP +D+ V R +PR + E   G  G
Sbjct:  833 VDRTLKSACERGKIVVGSKIAVMGAKLDCSKDEGSDVLQALGRST-----------LMITGNSTSLAPWHAKLGFRPE---------------------PFVASLASISPAGGLVPLLDIYVDRAFPRGYTELRKGRSG 939          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: UPI0004624672 (uncharacterized protein n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004624672)

HSP 1 Score: 63.9 bits (154), Expect = 1.000e-8
Identity = 43/120 (35.83%), Postives = 57/120 (47.50%), Query Frame = 0
Query:   10 RRGRIAIGSKLAVSGAVMDPDGADPLKMLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRE 129
            RRGRI IGSKLA+SGA +     +P ++L      +L         LT N T  A W+AKLGF K+                       +  L  LTP GG VPA+D+++ + YP  F E
Sbjct:  723 RRGRICIGSKLAISGAKLSGGRKEPCEILDAYDNTML--------ELTGNCTNLAPWHAKLGFVKQ---------------------PFIATLDKLTPDGGNVPAMDLIITKTYPIAFLE 813          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: A0A1M2W3F7_TRAPU (Breast cancer type 2 susceptibility protein-like protein n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2W3F7_TRAPU)

HSP 1 Score: 63.5 bits (153), Expect = 1.420e-8
Identity = 43/120 (35.83%), Postives = 56/120 (46.67%), Query Frame = 0
Query:   10 RRGRIAIGSKLAVSGAVMDPDGADPLKMLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRE 129
            RRGRI IGSKLA+SGA +     +P ++L      +L         LT N T  A W+AKLGF K                        +  L  LTP GG VPA+D+++ + YP  F E
Sbjct:  958 RRGRICIGSKLAISGAKLSGGRKEPCEILEAYDNTML--------ELTGNCTNLAPWHAKLGFVKH---------------------PFIATLDKLTPDGGMVPAMDLIITKTYPIAFLE 1048          
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Match: A0A7S2Q3B5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3B5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.830e-8
Identity = 56/161 (34.78%), Postives = 78/161 (48.45%), Query Frame = 0
Query:   13 RIAIGSKLAVSGAVMD--PDGADPLK---MLARRTRGLLPPGGGPCLRLTINGTRAALWNAKLGF-QKRCATRSSGDDDGPGGIRGGSESAMVLPLCSLTPGGGTVPAVDVVVHRRYPRLFRECGFGSGGGSGRGTMRILTEGEEEALQMEHQGVCQRAAE 167
            +I +GSKL +  A +    +G DPL       +RT  L        L++T N TR A W+AKLGF   +C           GGI        +  L  + PGGG +P++D+V+ +RYP++F E      G     T   LTEGEE + Q E+    QRA E
Sbjct:  400 KIRVGSKLLICNAQISGSDEGVDPLDESYSSEKRTCPLF-------LKITTNNTRLAKWDAKLGFVSPKC-----------GGI-------TIKALRDIYPGGGNIPSIDLVICKRYPKMFLEQMIT--GEHQIPTTTHLTEGEEASRQSEYDLKIQRAGE 533          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18814.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9DCX4_9STRA1.660e-2039.76BRCA-2_OB1 domain-containing protein n=1 Tax=Nanno... [more]
K8Z4D8_NANGC2.110e-2039.76Breast cancer 2 susceptibility protein n=1 Tax=Nan... [more]
W7U0L1_9STRA2.300e-2039.76DNA recombination/repair BRCA2 like protein n=1 Ta... [more]
A0A1X7T0V7_AMPQE4.910e-1133.76Uncharacterized protein n=2 Tax=Amphimedon queensl... [more]
A0A0D2UGS7_CAPO39.010e-1037.40Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
B5YME7_THAPS2.570e-935.47Breast cancer 2 early onset (Fragment) n=1 Tax=Tha... [more]
G0SX58_RHOT27.430e-933.09Rad51-associated protein Brh2 n=2 Tax=Rhodosporidi... [more]
UPI00046246721.000e-835.83uncharacterized protein n=1 Tax=Trametes versicolo... [more]
A0A1M2W3F7_TRAPU1.420e-835.83Breast cancer type 2 susceptibility protein-like p... [more]
A0A7S2Q3B5_9STRA1.830e-834.78Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015187BRCA2, OB1PFAMPF09103BRCA-2_OB1coord: 1..74
e-value: 6.3E-10
score: 39.1
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 1..76
e-value: 1.4E-10
score: 43.2
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 97..172
e-value: 1.4E-10
score: 43.2
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..76
IPR015525Breast cancer type 2 susceptibility proteinPANTHERPTHR11289BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2coord: 1..170
NoneNo IPR availablePANTHERPTHR11289:SF0BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEINcoord: 1..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18814contigP-wetherbeei_contig18814:626..1321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18814.1.1mRNA_P-wetherbeei_contig18814.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18814 626..1321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18814.1.1 ID=prot_P-wetherbeei_contig18814.1.1|Name=mRNA_P-wetherbeei_contig18814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp
LDDGLSFFARRGRIAIGSKLAVSGAVMDPDGADPLKMLARRTRGLLPPGG
GPCLRLTINGTRAALWNAKLGFQKRCATRSSGDDDGPGGIRGGSESAMVL
PLCSLTPGGGTVPAVDVVVHRRYPRLFRECGFGSGGGSGRGTMRILTEGE
EEALQMEHQGVCQRAAEEAAAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015187BRCA2_OB_1
IPR012340NA-bd_OB-fold
IPR015525BRCA2