prot_P-wetherbeei_contig1864.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1864.1.2
Unique Nameprot_P-wetherbeei_contig1864.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length788
Homology
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A2P6VCA5_9CHLO (F-box protein isoform X1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VCA5_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 1.490e-19
Identity = 64/166 (38.55%), Postives = 87/166 (52.41%), Query Frame = 0
Query:  355 QACPLLVLGEHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATS------GRRVW----LQRGDCCW--------RMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCLPLSTAVPEISEAE 502
            Q CPL  L   ++ +VL  L   SL A+   CR L  +   + PGL+L LFPHQR+++ WM+ RE      P   +   +         G   +    L RG  CW        RME P ++P ++GG+ CDEPGLGKTIT L+LLLRT G LP      E++ A+
Sbjct:    8 QPCPLSQLPTDVLLRVLCQLDKRSLGAAAAGCRHLYELTRDVAPGLQLQLFPHQRAAVLWMQARERAGGVLPHPTVAAFQCAEVDAGAGGAACFAGTPLPRGLPCWGDTATGELRMEPPDVMPDLQGGLFCDEPGLGKTITALALLLRTIGVLPALPPGTEVTWAQ 173          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A2P6TEP6_CHLSO (F-box protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TEP6_CHLSO)

HSP 1 Score: 102 bits (254), Expect = 1.650e-18
Identity = 79/240 (32.92%), Postives = 109/240 (45.42%), Query Frame = 0
Query:  355 QACPLLVLGEHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAA-----------APSDLLLPL----------------RATSGRRVWLQRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCLPLSTAVPEI-----------SEAERWSRAEEKWRHWGNLEKARELARIVRDLWVCEGER-GAA---GIYNRPVKKPPK 552
            Q CPL  L + ++  VL  L   +L A+  +CR LR +   + PGL+L+LFPHQR ++ WM+ RE   +A           AP   + P+                 A  G  +WL         E PP L  VRGG+  DEPGLGKTIT L+L+LRT G LP + A  E             EA +W         WG  E    +  +    WV  G++ GAA     Y R +++ P+
Sbjct:  232 QPCPLAQLDQPLLLSVLSRLDRRALVAAAASCRHLRELTRDVAPGLKLSLFPHQRIAVMWMQGREQPSSAPAQQPVGGGEAAPHPFIQPICCSELEADSAAAAFGQPAGPGLPLWLDTASGEALTEAPPELRGVRGGLFADEPGLGKTITALALILRTLGTLPAAPAGLEAPSGDFVCAMNPDEALQWQGCAASEEEWGAGEGGARV--LFCPGWVEAGKQPGAAHNVAFYRRLLQQHPR 469          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A388K795_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K795_CHABU)

HSP 1 Score: 102 bits (254), Expect = 1.650e-18
Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 0
Query:  364 EHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGRRVWLQRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRG 487
            + I+  +L  LSAA L +    CR  R + A + PGL+L LFPHQR+++ WM +RE +    P  L + L++  G+R  +      +  E P  +   RGG+ CDEPGLGKT+T LSL+L+T+G
Sbjct:  223 DEILVSILARLSAADLRSVEAVCRHTRELAAGLAPGLKLDLFPHQRTAVRWMLQRERKVNCYPHPLCMELQSEDGKRYNINVVSGAFSSEAPSSICDFRGGLFCDEPGLGKTVTALSLVLKTQG 346          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: I0YTS8_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YTS8_COCSC)

HSP 1 Score: 102 bits (253), Expect = 1.920e-18
Identity = 55/129 (42.64%), Postives = 71/129 (55.04%), Query Frame = 0
Query:  362 LGEHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGRRVWLQRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCLP 490
            L   I+  V+  L    + A   TCR  R + +   P LRL+LFPHQR +L WM ERE E    P+    P     G  +W        R+E PP +  +RGG  CDEPGLGKTIT L+L+LRT+G +P
Sbjct:   34 LSADILQDVVGHLDTTDICALSCTCRLFRAVCSEAAPFLRLSLFPHQRCALRWMLEREKEAGLLPNPTWRPFPTKDGVPLWGCAASGGIRIEAPPDVRDLRGGFFCDEPGLGKTITALALILRTKGSVP 162          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A8J9RLB2_9CHLO (F-box protein At3g54460 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RLB2_9CHLO)

HSP 1 Score: 100 bits (250), Expect = 4.970e-18
Identity = 56/131 (42.75%), Postives = 74/131 (56.49%), Query Frame = 0
Query:  362 LGEHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGRRVW--LQRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCLP 490
            L   I+ +V+R L      A   TCR    I +   P LRL+L+PHQR++L WM ERE E +  P       +   G  +W     GD   R +EPP +  +RGG  CDEPGLGKTIT L+L+LRT+G +P
Sbjct:  187 LSADILQEVVRHLDTRDTCALSCTCRLFHVICSEAAPFLRLSLYPHQRAALRWMLEREKEASLMPHPTWRLFQTNDGLPLWGCTATGDI--RTDEPPSVTDIRGGFFCDEPGLGKTITALALVLRTKGSVP 315          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A7N0TWF3_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TWF3_KALFE)

HSP 1 Score: 99.8 bits (247), Expect = 1.130e-17
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 0
Query:  355 QACPLLVLGEHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGRRVWLQRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCL 489
            Q   +  L + ++ +VL  L    L +   TCR LR + A IVP ++L L+PHQR+++ WM +RE      P  L +  R+  G   ++          E P +   RGGM CDEPGLGKTIT LSL+L+TRG L
Sbjct:  222 QRSAMAELSDDLMLKVLNELGPEDLTSISATCRHLRLLAASIVPHMKLNLYPHQRAAVEWMLQREHNSDILPHPLYMHFRSKDGIGFYVSGVTGEIVTNEAPTIRDFRGGMFCDEPGLGKTITALSLILKTRGTL 356          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A7R9T830_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9T830_9VIRI)

HSP 1 Score: 94.4 bits (233), Expect = 1.340e-16
Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 0
Query:  369 QVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGRRVWL-----QRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRG 487
            +V+   S A+L A   TCR  R   A +VPGL+ +LFPHQ++++ WM  RE +R   P    +    T+G  +        R     R  +PP +   RGG+ CDEPGLGKT+T L+L+L+T G
Sbjct:  106 RVMALCSPAALRALGATCRHARTACAGVVPGLKCSLFPHQQAAVAWMLSREADRPPMPHHPAIRAHTTAGSELTYFIDPRARKGLALRTTKPPPVRDCRGGLFCDEPGLGKTVTALALILKTLG 229          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A2J6LPW0_LACSA (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6LPW0_LACSA)

HSP 1 Score: 95.5 bits (236), Expect = 2.310e-16
Identity = 58/147 (39.46%), Postives = 78/147 (53.06%), Query Frame = 0
Query:  345 KAAPVGGFVPQACPLLVLGEHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGR--RVWLQRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCL 489
            K  P   F P    LL   + ++  +L  LS   L     TCR LR +   I+P ++L LFPHQ+S++ WM +RE +    P+ L + L    G    V L  G+        P++   RGGM CDEPGLGKTIT LSL+L+T G L
Sbjct:  256 KINPADDFPPSGFHLLP--DDVMINILTSLSPLELLKISATCRHLRLLSQTIMPSMKLKLFPHQQSAVDWMLKRERDPETFPNPLYMKLETEDGFAFNVNLVSGELV--TGPTPMIKDFRGGMFCDEPGLGKTITALSLILKTLGTL 398          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A2I0WL57_9ASPA (F-box protein n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WL57_9ASPA)

HSP 1 Score: 95.5 bits (236), Expect = 2.360e-16
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0
Query:  334 AIYASLEPSEDKAAPVGGFVPQACPLLVLGEHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGRRVWLQRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCL 489
            A +  +EP E+ AA  G        +  L + ++ +VL  L    +     TC  LRC+ + I P ++L LFPHQ +++ WM  RE +    P  L +      G   ++            P +   RGG+ CDEPGLGKT+T LSL+L+T G L
Sbjct:  244 AFHFRIEPHENTAASPG--------IWDLADDVLYKVLSLLRPIDVVRIAATCHHLRCLASSITPCMKLKLFPHQEAAVVWMLRRERKSDLMPHPLCMRFSTVDGFSFYINTASGEISTGAAPTISDFRGGLFCDEPGLGKTVTALSLILKTHGTL 391          
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Match: A0A151RNK3_CAJCA (F-box protein At3g54460 family n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RNK3_CAJCA)

HSP 1 Score: 95.1 bits (235), Expect = 2.940e-16
Identity = 50/126 (39.68%), Postives = 68/126 (53.97%), Query Frame = 0
Query:  364 EHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGLRLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGRRVWLQRGDCCWRMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCL 489
            + I+ ++L  L    L     TCR LR + A ++P  +L LFPHQR+++ WM  RE      P  L +PL    G    +          E P +   RGGM CDEPGLGKT+T LSL+++TRG L
Sbjct:  234 DDILTKILASLGPMDLTRVSATCRHLRSLAASVMPCTKLNLFPHQRTAVEWMLHRERGAELLPHPLFVPLSTDDGFSFHVNTVSGEIVTGEAPTVKDFRGGMFCDEPGLGKTVTALSLIMKTRGSL 359          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1864.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6VCA5_9CHLO1.490e-1938.55F-box protein isoform X1 n=1 Tax=Micractinium cond... [more]
A0A2P6TEP6_CHLSO1.650e-1832.92F-box protein n=1 Tax=Chlorella sorokiniana TaxID=... [more]
A0A388K795_CHABU1.650e-1841.13Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
I0YTS8_COCSC1.920e-1842.64Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
A0A8J9RLB2_9CHLO4.970e-1842.75F-box protein At3g54460 n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A7N0TWF3_KALFE1.130e-1740.00Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A7R9T830_9VIRI1.340e-1639.52Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A2J6LPW0_LACSA2.310e-1639.46Uncharacterized protein n=3 Tax=Lactuca TaxID=4235... [more]
A0A2I0WL57_9ASPA2.360e-1633.33F-box protein n=3 Tax=Dendrobium catenatum TaxID=9... [more]
A0A151RNK3_CAJCA2.940e-1639.68F-box protein At3g54460 family n=2 Tax=Cajanus caj... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 407..513
e-value: 9.6E-11
score: 41.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availablePANTHERPTHR45626:SF14OS01G0952200 PROTEINcoord: 265..522
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 265..522
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 394..505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1864contigP-wetherbeei_contig1864:95..3650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1864.1.2mRNA_P-wetherbeei_contig1864.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1864 95..3650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1864.1.2 ID=prot_P-wetherbeei_contig1864.1.2|Name=mRNA_P-wetherbeei_contig1864.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=788bp
GESKEEKERGEEGENISSMPPRHSPAKWPRIGVSPQGSAARIRAPPKDRS
SGASGGVLGLATTEQFGLTFTLAAAASEFCPNDSPCPSFTSWESTTLQSP
RHLIIGGRSYHVVGGDVEALQDLHALAVGKAFRVIRLATRLLSGPPKSAP
RNARLHLEIDVGLAIRLPGGSGGKAAPTWELCQRFLALAPRLAAYRGPCS
GAAACPEAPGHLVAAAAPRSPIVAGAAAATAAGAAVCAAAGATAAGAAAT
ATEVDGAGFAAAAAAAGVVPATPPSIGKSKKRKAAAPMSRWHSSTKKGKK
CKGGDEDEDANTSKAAKAAEAAARAKAAKAALDAIYASLEPSEDKAAPVG
GFVPQACPLLVLGEHIVAQVLRFLSAASLEASVRTCRELRCIGAPIVPGL
RLTLFPHQRSSLCWMRERELERAAAPSDLLLPLRATSGRRVWLQRGDCCW
RMEEPPLLPPVRGGMLCDEPGLGKTITVLSLLLRTRGCLPLSTAVPEISE
AERWSRAEEKWRHWGNLEKARELARIVRDLWVCEGERGAAGIYNRPVKKP
PKPLTSPPAAVRRPEVMVAAIASAAAATVAAAATAAAAAAAPFDPEREGE
GSPAVWGAAAVAAAAPSPVPNAAAEPVVLRLPVSPGGAATAGSEVGGDRG
DAINGCGMSNGGSGGCFGDETAAGADQLGNGHGDGNGAAASGAFPAGKKA
PGRAGMSKCVVRQVREAAAGPEADLAAVDLAIQKDAYPTLREFRTDVETV
LRRAKQEAAARGQRAKDEAAAAAAAEVALAAAAVVAGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR027417P-loop_NTPase