prot_P-wetherbeei_contig18373.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18373.1.1
Unique Nameprot_P-wetherbeei_contig18373.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length66
Homology
BLAST of mRNA_P-wetherbeei_contig18373.1.1 vs. uniprot
Match: D7FTC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC4_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 8.090e-17
Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    2 ASIVSRVRELAHANTYQMRQTYLHVCQRLAGCV----DRRVFVAEFAPSFAELAMDRVVNVRIAMARTL 66
            AS+VSRVRELAHA+TYQ RQ Y+++C  +A       +R +F+ EF PS AELAMD VVNVRIAM+RTL
Sbjct:  501 ASMVSRVRELAHAHTYQARQMYVYICHSMACSANVNHERPLFIQEFVPSLAELAMDSVVNVRIAMSRTL 569          
BLAST of mRNA_P-wetherbeei_contig18373.1.1 vs. uniprot
Match: A0A6H5JAD4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD4_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 5.270e-16
Identity = 42/69 (60.87%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    2 ASIVSRVRELAHANTYQMRQTYLHVCQRLAGCV----DRRVFVAEFAPSFAELAMDRVVNVRIAMARTL 66
            AS+VSRVRELAHA+TYQ RQ Y+++C  +A       +R +F+ EF PS AELA D VVNVRIAM+RTL
Sbjct:  113 ASMVSRVRELAHAHTYQARQMYVYICHSMACSANVNHERPLFIQEFVPSLAELATDSVVNVRIAMSRTL 181          
BLAST of mRNA_P-wetherbeei_contig18373.1.1 vs. uniprot
Match: A0A836CCL0_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL0_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.240e-9
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:   20 RQTYLHVCQRLAGCVDRRVFVAEFAPSFAELAMDRVVNVRIAMARTL 66
            RQ Y+++CQRL   + R  FV+EF PS AELA DRVVNVRIA++RTL
Sbjct:  410 RQMYIYICQRLQAYLPRDDFVSEFMPSLAELATDRVVNVRIALSRTL 456          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18373.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTC4_ECTSI8.090e-1762.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAD4_9PHAE5.270e-1660.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836CCL0_9STRA1.240e-963.83Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..66
e-value: 7.5E-15
score: 56.7
IPR021133HEAT, type 2PROSITEPS50077HEAT_REPEATcoord: 43..66
score: 9.2246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18373contigP-wetherbeei_contig18373:110..307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18373.1.1mRNA_P-wetherbeei_contig18373.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18373 110..307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18373.1.1 ID=prot_P-wetherbeei_contig18373.1.1|Name=mRNA_P-wetherbeei_contig18373.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp
HASIVSRVRELAHANTYQMRQTYLHVCQRLAGCVDRRVFVAEFAPSFAEL
AMDRVVNVRIAMARTL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR021133HEAT_type_2