prot_P-wetherbeei_contig1830.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1830.3.1
Unique Nameprot_P-wetherbeei_contig1830.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length488
Homology
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BLAST of mRNA_P-wetherbeei_contig1830.3.1 vs. uniprot
Match: A0A836CME0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CME0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.580e-12
Identity = 119/447 (26.62%), Postives = 167/447 (37.36%), Query Frame = 0 
Query:   54 SAAELSVQELPAPSLLECPFVRHNYRC-VPLLLNNSTSDAIDAEEGSTEFGTSFERSDFSRRCGGDEAPLLTPNAKILFAGSSHIREIAQALICANAASLVEIKVQGGDRFQECKWSKDYKETASCSARDVLDGPCLLEP--WPLNTAGSDSEYDGRPEWTNF------------KDDLSSYRFSNGAFVYVACNHAIITTTEGVGKPGSGDAAESRLRGFDQLAAV---FGFAPSSLTGVVVHPGHNFRFGAGYFRGMSVPDSENG-SGAVPPCCRVPAVARTPVATGLVTADSGDDEVLQYPHPDGVQICKALKLPENENLCLINVVAFLGDIADAGFKGAAVVLDRTW----YGSPGDAAAAMLGSRDCLDRGTSGGRGVGNRTFSFEVGFLDLSLVMGGRSCSAPTCSQDIGDTGHQCLWLEEARLAGHPFDAARILLRMLSG 477
            +AA    Q  P P    CPFVR NY C    +  N  S   DA  G+            S          L    ++LF G+SHIRE+A+AL+C N A L  +                +    +  AR ++     + P  WP   A   ++ D                    +DD ++Y FSNGA +++A N       EG   P S            QL+AV     F    LT VV + G+        FRG ++     G + A+PP   +PA  RT     L T   G         P G       + P      LI++      +A A F G+ VV D+      +  P D AA    +        +GGR        F++ ++D+   + G  CSA          GHQCL        G P D ARI+LR + G
Sbjct:   38 AAAAQRGQPAPQPP---CPFVRSNYMCSAEAVAANWRSCCADASCGAP----------CSSGXXXXXXXALRARTRVLFFGNSHIRELAEALVCDNLALLTGVT---------------FMPNVTADARTLMMRGHTVPPLHWPYLLAAGLTDPDAGXXXXXXXXXXXXXXXEAPQDDYATYHFSNGALIHMAINVPPTLIAEGEAAPASSPF---------QLSAVADYLNFKFEDLTAVVANVGN--------FRGWAIKAFCGGDAAALPP--PLPAFERT--CDDLATYTPGT--------PLG-------RTP------LIHLPTLALRLAAARFAGSLVVTDQVMEPVTHEPPLDLAATTAAAA------AAGGR--------FKLSYVDMGSFIIGHQCSAEGGGACTTRPGHQCL-------PGPPNDGARIVLRQIYG 393
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1830.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CME0_9STRA4.580e-1226.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1830contigP-wetherbeei_contig1830:3953..5993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1830.3.1mRNA_P-wetherbeei_contig1830.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1830 3538..6112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1830.3.1 ID=prot_P-wetherbeei_contig1830.3.1|Name=mRNA_P-wetherbeei_contig1830.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=488bp
MRVLSSRSCEDRWKLTFAQRNLQGGQRRDHSAVFLLLFGLLVQSVTPSFL
ARRSAAELSVQELPAPSLLECPFVRHNYRCVPLLLNNSTSDAIDAEEGST
EFGTSFERSDFSRRCGGDEAPLLTPNAKILFAGSSHIREIAQALICANAA
SLVEIKVQGGDRFQECKWSKDYKETASCSARDVLDGPCLLEPWPLNTAGS
DSEYDGRPEWTNFKDDLSSYRFSNGAFVYVACNHAIITTTEGVGKPGSGD
AAESRLRGFDQLAAVFGFAPSSLTGVVVHPGHNFRFGAGYFRGMSVPDSE
NGSGAVPPCCRVPAVARTPVATGLVTADSGDDEVLQYPHPDGVQICKALK
LPENENLCLINVVAFLGDIADAGFKGAAVVLDRTWYGSPGDAAAAMLGSR
DCLDRGTSGGRGVGNRTFSFEVGFLDLSLVMGGRSCSAPTCSQDIGDTGH
QCLWLEEARLAGHPFDAARILLRMLSGQKLPYGCPSQ*
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