prot_P-wetherbeei_contig1823.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig1823.2.1
Unique Name	prot_P-wetherbeei_contig1823.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	129

Homology

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: A0A7S3H022_9STRA (Hypothetical protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A7S3H022_9STRA)

HSP 1 Score: 243 bits (621), Expect = 4.110e-81
Identity = 121/128 (94.53%), Postives = 127/128 (99.22%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITL+VEPSD+IDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGGV+DPSLAALAKTFNCEKM+CRKCYARLPPRA+NCRKKKCGHTNQLR KKKLK
Sbjct:   19 MQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVFDPSLAALAKTFNCEKMICRKCYARLPPRAKNCRKKKCGHTNQLRIKKKLK 146

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: W7TN89_9STRA (Ubiquitin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN89_9STRA)

HSP 1 Score: 244 bits (624), Expect = 6.720e-81
Identity = 122/128 (95.31%), Postives = 126/128 (98.44%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITLDVEPSDTI+NVKQKIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKM+CRKCYARLPPRA+NCRKKKCGHTN LR KKKLK
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMICRKCYARLPPRAKNCRKKKCGHTNHLRIKKKLK 128

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: B7G5H7_PHATC (Ubiquitin extension protein 1/2 n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7G5H7_PHATC)

HSP 1 Score: 239 bits (610), Expect = 1.070e-79
Identity = 120/128 (93.75%), Postives = 123/128 (96.09%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITLDVEPSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGGVYDPSLA LAK FNC+K VCRKCYARLPPRA NCRKKKCGHT+QLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPSLALLAKGFNCDKAVCRKCYARLPPRATNCRKKKCGHTSQLRPKKKLK 128

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: A0A1Z5JFA3_FISSO (Large subunit ribosomal protein L40e n=4 Tax=Stramenopiles TaxID=33634 RepID=A0A1Z5JFA3_FISSO)

HSP 1 Score: 238 bits (608), Expect = 2.160e-79
Identity = 119/128 (92.97%), Postives = 123/128 (96.09%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITLDVEPSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGGVYDP+LA LAK FNC+K VCRKCYARLPPRA NCRKKKCGHT+QLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPTLAMLAKKFNCDKAVCRKCYARLPPRATNCRKKKCGHTSQLRPKKKLK 128

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: A0A448YZG3_9STRA (Ubiquitin-like domain-containing protein n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A448YZG3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.780e-78
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITLDVEPSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGGVYDPSLA LA+ +NCEK +CRKCYARLPP+A NCRKKKCGHT QLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPSLAMLARKYNCEKAICRKCYARLPPKASNCRKKKCGHTAQLRPKKKLK 128

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: A0A0G4EN71_VITBC (Ubiquitin-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EN71_VITBC)

HSP 1 Score: 236 bits (602), Expect = 8.550e-78
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITLDVEPSDTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGGV +PSLA LA+ +NCEKM+CRKCYARLPPRA NCRKKKCGHTNQLRPKKKLK
Sbjct:   48 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLAVLARKYNCEKMICRKCYARLPPRAVNCRKKKCGHTNQLRPKKKLK 175

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: K0RS17_THAOC (Ubiquitin-like domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RS17_THAOC)

HSP 1 Score: 236 bits (601), Expect = 1.640e-77
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            M IFVKTLTGKTITLDVEPSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGGVYDPSLA LAK FNCEK +CRKCYARLPP+A NCRKKKCGH++QLRPKKKLK
Sbjct:   57 MAIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYDPSLALLAKKFNCEKQICRKCYARLPPKATNCRKKKCGHSSQLRPKKKLK 184

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: RL40_NEUCR (Ubiquitin-60S ribosomal protein L40 n=7 Tax=Eukaryota TaxID=2759 RepID=RL40_NEUCR)

HSP 1 Score: 233 bits (594), Expect = 2.960e-77
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITL+VE SDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGG+ +PSL ALA  FNC+KM+CRKCYARLPPRA NCRK+KCGHTNQLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASKFNCDKMICRKCYARLPPRATNCRKRKCGHTNQLRPKKKLK 128

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: B6K0H2_SCHJY (Ribosomal-ubiquitin fusion protein Ubi1 n=8 Tax=Ascomycota TaxID=4890 RepID=B6K0H2_SCHJY)

HSP 1 Score: 232 bits (592), Expect = 5.960e-77
Identity = 115/128 (89.84%), Postives = 121/128 (94.53%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGG+ +PSL ALA  +NCEKM+CRKCYARLPPRA NCRKKKCGHTNQLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASKYNCEKMICRKCYARLPPRATNCRKKKCGHTNQLRPKKKLK 128

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BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Match: A0A1E1M444_RHYSE (Probable ubiquitin fusion protein (Ubiquitin / ribosomal protein) n=2 Tax=leotiomyceta TaxID=716546 RepID=A0A1E1M444_RHYSE)

HSP 1 Score: 232 bits (592), Expect = 5.960e-77
Identity = 115/128 (89.84%), Postives = 121/128 (94.53%), Query Frame = 0

Query:    1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCYARLPPRAQNCRKKKCGHTNQLRPKKKLK 128
            MQIFVKTLTGKTITL+VE SDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGR+LSDYNIQKESTLHLVLRLRGG+ +PSL ALA  FNC+KM+CRKCYARLPPRA NCRKKKCGHTNQLRPKKKLK
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLKALASKFNCDKMICRKCYARLPPRAANCRKKKCGHTNQLRPKKKLK 128

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig1823.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3H022_9STRA	4.110e-81	94.53	Hypothetical protein n=5 Tax=Eukaryota TaxID=2759 ...	[more]
W7TN89_9STRA	6.720e-81	95.31	Ubiquitin n=2 Tax=Monodopsidaceae TaxID=425072 Rep...	[more]
B7G5H7_PHATC	1.070e-79	93.75	Ubiquitin extension protein 1/2 n=9 Tax=Bacillario...	[more]
A0A1Z5JFA3_FISSO	2.160e-79	92.97	Large subunit ribosomal protein L40e n=4 Tax=Stram...	[more]
A0A448YZG3_9STRA	1.780e-78	91.41	Ubiquitin-like domain-containing protein n=6 Tax=B...	[more]
A0A0G4EN71_VITBC	8.550e-78	91.41	Ubiquitin-like domain-containing protein n=1 Tax=V...	[more]
K0RS17_THAOC	1.640e-77	91.41	Ubiquitin-like domain-containing protein n=1 Tax=T...	[more]
RL40_NEUCR	2.960e-77	89.84	Ubiquitin-60S ribosomal protein L40 n=7 Tax=Eukary...	[more]
B6K0H2_SCHJY	5.960e-77	89.84	Ribosomal-ubiquitin fusion protein Ubi1 n=8 Tax=As...	[more]
A0A1E1M444_RHYSE	5.960e-77	89.84	Probable ubiquitin fusion protein (Ubiquitin / rib...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 32..52 score: 95.05 coord: 53..74 score: 87.98 coord: 11..31 score: 78.22
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 1.9E-35 score: 133.8
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..74 e-value: 3.8E-33 score: 113.1
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..76 score: 30.735186
IPR001975	Ribosomal protein L40e	SMART	SM01377	Ribosomal_L40e_3	coord: 77..128 e-value: 2.4E-30 score: 116.8
IPR001975	Ribosomal protein L40e	PFAM	PF01020	Ribosomal_L40e	coord: 79..127 e-value: 1.2E-28 score: 98.7
None	No IPR available	GENE3D	3.10.20.90		coord: 1..79 e-value: 6.5E-46 score: 156.2
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 1..125
None	No IPR available	PANTHER	PTHR10666:SF368	UBIQUITIN-60S RIBOSOMAL PROTEIN L40	coord: 1..125
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 1..76 e-value: 2.52299E-55 score: 165.31
IPR038587	Ribosomal protein L40e superfamily	GENE3D	4.10.1060.50		coord: 80..128 e-value: 6.9E-29 score: 101.6
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 27..52
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..76
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 76..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig1823	contig	P-wetherbeei_contig1823:5078..5854 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig1823.2.1	mRNA_P-wetherbeei_contig1823.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig1823 5078..5854 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig1823.2.1 ID=prot_P-wetherbeei_contig1823.2.1|Name=mRNA_P-wetherbeei_contig1823.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp
MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRSLSDYNIQKESTLHLVLRLRGGVYDPSLAALAKTFNCEKMVCRKCY
ARLPPRAQNCRKKKCGHTNQLRPKKKLK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019956	Ubiquitin_dom
IPR000626	Ubiquitin-like_dom
IPR001975	Ribosomal_L40e
IPR038587	L40e_sf
IPR019954	Ubiquitin_CS
IPR029071	Ubiquitin-like_domsf
IPR011332	Ribosomal_zn-bd