prot_P-wetherbeei_contig18170.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18170.2.1
Unique Nameprot_P-wetherbeei_contig18170.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length191
Homology
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A523PEZ8_9PROT (Protein translocase subunit SecD n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PEZ8_9PROT)

HSP 1 Score: 224 bits (570), Expect = 8.710e-67
Identity = 109/190 (57.37%), Postives = 148/190 (77.89%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEH-YVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAA 189
            MN+YPLWRY+++  ++ +GVLYA PNLYG DP+LQISARRS  VD+AL  +VV+AL A+ ++ +  E    R+LLRF+D   R +A EV++  +    Y+VALN+A  TP WLR +G +PMYMGLDLRGGVHFLM+VD++AV  Q+D+RFVSELRTA R+EKIRYR+++R+PTGG+   FLN +M+ +AA
Sbjct:    1 MNQYPLWRYLMIAGVIGLGVLYAAPNLYGTDPSLQISARRSAPVDEALKAQVVEALGAAGVSPRLAEVGGNRLLLRFDDNKIRAQASEVLDTALDTRKYIVALNLAPRTPGWLRVLGGRPMYMGLDLRGGVHFLMEVDVNAVGKQSDDRFVSELRTALREEKIRYRTVSRDPTGGIVAKFLNAQMRAQAA 190          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A3D5DC51_9GAMM (Protein translocase subunit SecD (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC51_9GAMM)

HSP 1 Score: 214 bits (546), Expect = 4.970e-65
Identity = 110/195 (56.41%), Postives = 143/195 (73.33%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASN---IAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEH-YVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI 191
            MN YP+WRY++VL+IV +G LYA PNLYG DPALQ+SARRS  VD++L + V + L  +    I ++ T  H   +LLRF D+  RTKA  V   T  +  Y+VALN+A  TP+WL A+G KPMYMGLDLRGGVHFLMQVD+DAV  Q+DERF+SELR+  R+E++RYR+I+R+P GG+  SFLN E+K  A  +
Sbjct:    1 MNHYPMWRYLMVLIIVGLGALYAAPNLYGTDPALQVSARRSAPVDESLKSLVENKLTDAGVLPIGIRLTPNH---LLLRFKDVATRTKAIAVFNSTFKQQEYIVALNLAPRTPNWLLALGGKPMYMGLDLRGGVHFLMQVDVDAVAAQSDERFMSELRSTLREERVRYRTISRDPAGGILASFLNPEVKSAAEDV 192          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A661DHR2_9GAMM (Protein translocase subunit SecD (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661DHR2_9GAMM)

HSP 1 Score: 195 bits (495), Expect = 5.630e-59
Identity = 101/191 (52.88%), Postives = 133/191 (69.63%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI 191
            MN YPLW+ +L++ IV IG+ YALPNLYGDDPA+Q+SA R  TVD AL ++V  ALKA +I+ KR E  D R+++RF D D + KA+EV+  T+   Y++ALN+A  TP WL A GA+PM +GLDLRGGVHFLM+VDMDA    +   + SELRT  RD+KIRY+ I +  T  V + F + E +  A  I
Sbjct:    1 MNHYPLWKNLLIVSIVVIGIFYALPNLYGDDPAVQVSAGRQGTVDLALVSKVEAALKAESISYKRAELEDDRLMVRFADADTQLKAKEVLNNTIVGDYIIALNLAPTTPGWLAAFGAEPMNLGLDLRGGVHFLMEVDMDAAVKLSLNSYASELRTLLRDKKIRYKKI-QVGTDNVTIGFRSVEHRDSAESI 190          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A2A4WDV2_9GAMM (Protein translocase subunit SecD n=2 Tax=Thiotrichales TaxID=72273 RepID=A0A2A4WDV2_9GAMM)

HSP 1 Score: 203 bits (517), Expect = 6.850e-59
Identity = 100/192 (52.08%), Postives = 137/192 (71.35%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTG-GVRVSFLNEEMKHKAAPI 191
            MN+YP W+Y+L++ ++  GVLYALPNLYGDDPALQIS  R  TVD+A   RV D LK   I  K  E  ++ +L+RFN+ + + KA++++ +T+ ++YV+ALN++ ATPDWL A+ A PMY+GLDLRGGVHFLM+VDM A   Q  ER+VS+LR+  R EK+RY SIAR  +G  + + F NE  +  A  I
Sbjct:    1 MNQYPTWKYVLIITVILTGVLYALPNLYGDDPALQISPLRGATVDEASMMRVTDILKGEGIPFKSIEQIERGMLVRFNNTNTQMKAKDLIAETMADNYVLALNLSPATPDWLTALNAAPMYLGLDLRGGVHFLMEVDMVAAARQAGERYVSDLRSILRGEKVRYLSIARTNSGHSIEIKFRNEADRDTARSI 192          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A3B0ZWC9_9ZZZZ (Protein translocase subunit SecD n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0ZWC9_9ZZZZ)

HSP 1 Score: 199 bits (505), Expect = 3.600e-57
Identity = 96/182 (52.75%), Postives = 131/182 (71.98%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGG-VRVSFLN 181
            MN+YP W+Y+L++ ++  GVLYALPNLYGDDPA+QIS  R   VD+A  TRV + LK   I  K  E  ++ +L+RFN+ + + KA++++ + +GE+Y+ ALN++ ATPDWL AI A PMY+GLDLRGGVHFLM+VDM A   Q  ER+VS+LR+  R EK+RY SIAR   G  + + F N
Sbjct:    1 MNQYPTWKYVLIITVILTGVLYALPNLYGDDPAVQISPLRGAAVDEASITRVTEILKGEGIPYKSIEQIERGMLVRFNNTETQLKAKDLIAEKMGENYIPALNLSPATPDWLAAINAAPMYLGLDLRGGVHFLMEVDMVAAARQAGERYVSDLRSILRGEKVRYLSIARTSNGNSIEIKFRN 182          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A3M1DMY0_9GAMM (Protein translocase subunit SecD n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DMY0_9GAMM)

HSP 1 Score: 198 bits (503), Expect = 6.490e-57
Identity = 97/191 (50.79%), Postives = 138/191 (72.25%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI 191
            MN+YPLW+ +L+L ++ +GV+YALPNLYG+DPALQIS+ R E +D  L  +V+ AL+   +  K  + H   +++RF+D + + KAR++V   +GE YVVA+N+A +TP WLRAIG +PM +GLDLRGGVHFLMQVDM+AVR Q + RFVS+L++  R+EKIRYR +  +  G + VS  N   + KA  +
Sbjct:    1 MNQYPLWKQLLILSVLLLGVVYALPNLYGEDPALQISSPRGEAIDSFLRDKVIIALEGEKLPYKSIDMHPDSMVVRFSDTETQLKARDIVAAALGEDYVVAVNLAPSTPAWLRAIGGQPMNLGLDLRGGVHFLMQVDMEAVRKQAETRFVSDLKSQLREEKIRYRGVKTDK-GTLVVSLRNAADREKAEAL 190          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A7C2AES5_9GAMM (Protein translocase subunit SecD (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C2AES5_9GAMM)

HSP 1 Score: 189 bits (481), Expect = 1.290e-56
Identity = 92/192 (47.92%), Postives = 133/192 (69.27%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGG-VRVSFLNEEMKHKAAPI 191
            MN+YPLW+Y+L+ V++  G LYALPNLYGDDP++Q+S  R   +DD    RV + LK   I  K  E   + +L+RFN+ + + +A++++++ +G++YV ALN++ ATP WL A+ A PMY+GLDLRGGVHFLM+VDM A   Q  ER+VS+LR+  R EK+RY SIA+  +G  V + F N   +  A+ I
Sbjct:    1 MNQYPLWKYVLIAVVILTGALYALPNLYGDDPSVQVSPLRGAPIDDESRMRVTELLKGEGITFKSFEMVPRGMLIRFNNTEDQLRAKDLIDEKMGDNYVSALNLSPATPAWLSALNAAPMYLGLDLRGGVHFLMEVDMVAALRQAGERYVSDLRSILRGEKVRYLSIAKTSSGNAVEIKFRNASDRDAASAI 192          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A3M0ZB82_9GAMM (Protein translocase subunit SecD (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0ZB82_9GAMM)

HSP 1 Score: 196 bits (499), Expect = 2.180e-56
Identity = 96/188 (51.06%), Postives = 135/188 (71.81%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKA 188
            MN YPLW+ +L+L ++ +GVLYALPNLYG+DPALQIS+ R   VD +LA RV   L  + I  +  E   K +L+RF D +++ +A++++ +++GE YVVALN+A  TP WL+AIGAKPMY+GLDLRGGVHFLM+VDMDAV  QT +R+V +LR   R +K+RY  I ++P G + + F +   +  A
Sbjct:    1 MNRYPLWKNLLILAVIVVGVLYALPNLYGEDPALQISSSRGAPVDRSLADRVKLELGQAKIPYRAVEQGPKGLLVRFPDAESQLRAQDLLRESLGERYVVALNLAPRTPAWLQAIGAKPMYLGLDLRGGVHFLMEVDMDAVMEQTRQRYVDDLRALLRSKKVRYLGILKQPDGSLLLRFRDAAQRSAA 188          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A7C5J7B5_9GAMM (Protein translocase subunit SecD n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7C5J7B5_9GAMM)

HSP 1 Score: 195 bits (496), Expect = 7.220e-56
Identity = 96/188 (51.06%), Postives = 132/188 (70.21%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKA 188
            MN+YPLW+Y+L++V+V  G++YALPNLYG+DPA+QIS  R+  +D+    R V+ L+ + I     E    ++ +RF D  A+ KAR+V+ + +GE YV AL +  ATP WL AI A PMY+GLDLRGGVHFLM+VDMDA   Q +ER+VS++R   R EKIRY S+AR+  GG+ V F +E  + KA
Sbjct:    1 MNQYPLWKYLLIVVVVIAGLVYALPNLYGEDPAVQISPLRATVIDEEAQMRFVNTLRNAQIDFTAVEKVQDKLFIRFADTSAQLKARDVLTEELGEDYVAALTLLPATPGWLAAIDADPMYLGLDLRGGVHFLMEVDMDAAVRQAEERYVSDIRAILRAEKIRYLSLARKNEGGIEVKFRSEADRDKA 188          
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A2N2ACP7_9GAMM (Protein translocase subunit SecD n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-1 TaxID=2013791 RepID=A0A2N2ACP7_9GAMM)

HSP 1 Score: 195 bits (496), Expect = 7.330e-56
Identity = 101/191 (52.88%), Postives = 132/191 (69.11%), Query Frame = 0
Query:    1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI 191
            MN+YPLW+Y+L+ V++ +GV YALPNLYGDDPA+Q+ A R+  VD A   R+  ALKA  I +KR E     +LLRF   + + KA E+V +T+G +Y VALN+A ATP WLRAI A PMY+GLDLRGGVHFLMQVDMDA   Q  ER+VS+ RT  R+ K+RY ++A    G V   F + E + +A  +
Sbjct:    1 MNKYPLWKYLLIAVVLLVGVFYALPNLYGDDPAVQVLATRAGKVDGATLGRLEQALKAQGIELKRAELAGDTLLLRFTGTEPQLKAYELVRETLGGNYAVALNLAPATPGWLRAIDALPMYLGLDLRGGVHFLMQVDMDAAAAQALERYVSDWRTLLRENKLRYLTVATN-AGQVEARFRSAEERDQAQEL 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523PEZ8_9PROT8.710e-6757.37Protein translocase subunit SecD n=1 Tax=Proteobac... [more]
A0A3D5DC51_9GAMM4.970e-6556.41Protein translocase subunit SecD (Fragment) n=1 Ta... [more]
A0A661DHR2_9GAMM5.630e-5952.88Protein translocase subunit SecD (Fragment) n=1 Ta... [more]
A0A2A4WDV2_9GAMM6.850e-5952.08Protein translocase subunit SecD n=2 Tax=Thiotrich... [more]
A0A3B0ZWC9_9ZZZZ3.600e-5752.75Protein translocase subunit SecD n=1 Tax=hydrother... [more]
A0A3M1DMY0_9GAMM6.490e-5750.79Protein translocase subunit SecD n=1 Tax=Gammaprot... [more]
A0A7C2AES5_9GAMM1.290e-5647.92Protein translocase subunit SecD (Fragment) n=1 Ta... [more]
A0A3M0ZB82_9GAMM2.180e-5651.06Protein translocase subunit SecD (Fragment) n=1 Ta... [more]
A0A7C5J7B5_9GAMM7.220e-5651.06Protein translocase subunit SecD n=2 Tax=Gammaprot... [more]
A0A2N2ACP7_9GAMM7.330e-5652.88Protein translocase subunit SecD n=1 Tax=Gammaprot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.260coord: 27..105
e-value: 1.8E-5
score: 26.5
NoneNo IPR availableGENE3D3.30.70.3400coord: 122..189
e-value: 3.2E-6
score: 29.3
IPR027398SecD export protein N-terminal TM domainPFAMPF13721SecD-TM1coord: 1..102
e-value: 2.0E-34
score: 118.1
IPR022646Protein-export membrane protein SecD/SecF/SecDF, conserved sitePFAMPF07549Sec_GGcoord: 114..140
e-value: 1.6E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18170contigP-wetherbeei_contig18170:800..1372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18170.2.1mRNA_P-wetherbeei_contig18170.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18170 800..1372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18170.2.1 ID=prot_P-wetherbeei_contig18170.2.1|Name=mRNA_P-wetherbeei_contig18170.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp
MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALAT
RVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVV
ALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFV
SELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027398SecD-TM
IPR022646SecD/SecF_CS