mRNA_P-wetherbeei_contig18170.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A523PEZ8_9PROT (Protein translocase subunit SecD n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PEZ8_9PROT) HSP 1 Score: 224 bits (570), Expect = 8.710e-67 Identity = 109/190 (57.37%), Postives = 148/190 (77.89%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEH-YVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAA 567
MN+YPLWRY+++ ++ +GVLYA PNLYG DP+LQISARRS VD+AL +VV+AL A+ ++ + E R+LLRF+D R +A EV++ + Y+VALN+A TP WLR +G +PMYMGLDLRGGVHFLM+VD++AV Q+D+RFVSELRTA R+EKIRYR+++R+PTGG+ FLN +M+ +AA
Sbjct: 1 MNQYPLWRYLMIAGVIGLGVLYAAPNLYGTDPSLQISARRSAPVDEALKAQVVEALGAAGVSPRLAEVGGNRLLLRFDDNKIRAQASEVLDTALDTRKYIVALNLAPRTPGWLRVLGGRPMYMGLDLRGGVHFLMEVDVNAVGKQSDDRFVSELRTALREEKIRYRTVSRDPTGGIVAKFLNAQMRAQAA 190
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A3D5DC51_9GAMM (Protein translocase subunit SecD (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC51_9GAMM) HSP 1 Score: 214 bits (546), Expect = 4.970e-65 Identity = 110/195 (56.41%), Postives = 143/195 (73.33%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASN---IAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEH-YVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI 573
MN YP+WRY++VL+IV +G LYA PNLYG DPALQ+SARRS VD++L + V + L + I ++ T H +LLRF D+ RTKA V T + Y+VALN+A TP+WL A+G KPMYMGLDLRGGVHFLMQVD+DAV Q+DERF+SELR+ R+E++RYR+I+R+P GG+ SFLN E+K A +
Sbjct: 1 MNHYPMWRYLMVLIIVGLGALYAAPNLYGTDPALQVSARRSAPVDESLKSLVENKLTDAGVLPIGIRLTPNH---LLLRFKDVATRTKAIAVFNSTFKQQEYIVALNLAPRTPNWLLALGGKPMYMGLDLRGGVHFLMQVDVDAVAAQSDERFMSELRSTLREERVRYRTISRDPAGGILASFLNPEVKSAAEDV 192
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A661DHR2_9GAMM (Protein translocase subunit SecD (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661DHR2_9GAMM) HSP 1 Score: 195 bits (495), Expect = 5.630e-59 Identity = 101/191 (52.88%), Postives = 133/191 (69.63%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI 573
MN YPLW+ +L++ IV IG+ YALPNLYGDDPA+Q+SA R TVD AL ++V ALKA +I+ KR E D R+++RF D D + KA+EV+ T+ Y++ALN+A TP WL A GA+PM +GLDLRGGVHFLM+VDMDA + + SELRT RD+KIRY+ I + T V + F + E + A I
Sbjct: 1 MNHYPLWKNLLIVSIVVIGIFYALPNLYGDDPAVQVSAGRQGTVDLALVSKVEAALKAESISYKRAELEDDRLMVRFADADTQLKAKEVLNNTIVGDYIIALNLAPTTPGWLAAFGAEPMNLGLDLRGGVHFLMEVDMDAAVKLSLNSYASELRTLLRDKKIRYKKI-QVGTDNVTIGFRSVEHRDSAESI 190
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A2A4WDV2_9GAMM (Protein translocase subunit SecD n=2 Tax=Thiotrichales TaxID=72273 RepID=A0A2A4WDV2_9GAMM) HSP 1 Score: 203 bits (517), Expect = 6.850e-59 Identity = 100/192 (52.08%), Postives = 137/192 (71.35%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTG-GVRVSFLNEEMKHKAAPI 573
MN+YP W+Y+L++ ++ GVLYALPNLYGDDPALQIS R TVD+A RV D LK I K E ++ +L+RFN+ + + KA++++ +T+ ++YV+ALN++ ATPDWL A+ A PMY+GLDLRGGVHFLM+VDM A Q ER+VS+LR+ R EK+RY SIAR +G + + F NE + A I
Sbjct: 1 MNQYPTWKYVLIITVILTGVLYALPNLYGDDPALQISPLRGATVDEASMMRVTDILKGEGIPFKSIEQIERGMLVRFNNTNTQMKAKDLIAETMADNYVLALNLSPATPDWLTALNAAPMYLGLDLRGGVHFLMEVDMVAAARQAGERYVSDLRSILRGEKVRYLSIARTNSGHSIEIKFRNEADRDTARSI 192
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A3B0ZWC9_9ZZZZ (Protein translocase subunit SecD n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0ZWC9_9ZZZZ) HSP 1 Score: 199 bits (505), Expect = 3.600e-57 Identity = 96/182 (52.75%), Postives = 131/182 (71.98%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGG-VRVSFLN 543
MN+YP W+Y+L++ ++ GVLYALPNLYGDDPA+QIS R VD+A TRV + LK I K E ++ +L+RFN+ + + KA++++ + +GE+Y+ ALN++ ATPDWL AI A PMY+GLDLRGGVHFLM+VDM A Q ER+VS+LR+ R EK+RY SIAR G + + F N
Sbjct: 1 MNQYPTWKYVLIITVILTGVLYALPNLYGDDPAVQISPLRGAAVDEASITRVTEILKGEGIPYKSIEQIERGMLVRFNNTETQLKAKDLIAEKMGENYIPALNLSPATPDWLAAINAAPMYLGLDLRGGVHFLMEVDMVAAARQAGERYVSDLRSILRGEKVRYLSIARTSNGNSIEIKFRN 182
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A3M1DMY0_9GAMM (Protein translocase subunit SecD n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DMY0_9GAMM) HSP 1 Score: 198 bits (503), Expect = 6.490e-57 Identity = 97/191 (50.79%), Postives = 138/191 (72.25%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI 573
MN+YPLW+ +L+L ++ +GV+YALPNLYG+DPALQIS+ R E +D L +V+ AL+ + K + H +++RF+D + + KAR++V +GE YVVA+N+A +TP WLRAIG +PM +GLDLRGGVHFLMQVDM+AVR Q + RFVS+L++ R+EKIRYR + + G + VS N + KA +
Sbjct: 1 MNQYPLWKQLLILSVLLLGVVYALPNLYGEDPALQISSPRGEAIDSFLRDKVIIALEGEKLPYKSIDMHPDSMVVRFSDTETQLKARDIVAAALGEDYVVAVNLAPSTPAWLRAIGGQPMNLGLDLRGGVHFLMQVDMEAVRKQAETRFVSDLKSQLREEKIRYRGVKTDK-GTLVVSLRNAADREKAEAL 190
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A7C2AES5_9GAMM (Protein translocase subunit SecD (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C2AES5_9GAMM) HSP 1 Score: 189 bits (481), Expect = 1.290e-56 Identity = 92/192 (47.92%), Postives = 133/192 (69.27%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGG-VRVSFLNEEMKHKAAPI 573
MN+YPLW+Y+L+ V++ G LYALPNLYGDDP++Q+S R +DD RV + LK I K E + +L+RFN+ + + +A++++++ +G++YV ALN++ ATP WL A+ A PMY+GLDLRGGVHFLM+VDM A Q ER+VS+LR+ R EK+RY SIA+ +G V + F N + A+ I
Sbjct: 1 MNQYPLWKYVLIAVVILTGALYALPNLYGDDPSVQVSPLRGAPIDDESRMRVTELLKGEGITFKSFEMVPRGMLIRFNNTEDQLRAKDLIDEKMGDNYVSALNLSPATPAWLSALNAAPMYLGLDLRGGVHFLMEVDMVAALRQAGERYVSDLRSILRGEKVRYLSIAKTSSGNAVEIKFRNASDRDAASAI 192
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A3M0ZB82_9GAMM (Protein translocase subunit SecD (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0ZB82_9GAMM) HSP 1 Score: 196 bits (499), Expect = 2.180e-56 Identity = 96/188 (51.06%), Postives = 135/188 (71.81%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKA 564
MN YPLW+ +L+L ++ +GVLYALPNLYG+DPALQIS+ R VD +LA RV L + I + E K +L+RF D +++ +A++++ +++GE YVVALN+A TP WL+AIGAKPMY+GLDLRGGVHFLM+VDMDAV QT +R+V +LR R +K+RY I ++P G + + F + + A
Sbjct: 1 MNRYPLWKNLLILAVIVVGVLYALPNLYGEDPALQISSSRGAPVDRSLADRVKLELGQAKIPYRAVEQGPKGLLVRFPDAESQLRAQDLLRESLGERYVVALNLAPRTPAWLQAIGAKPMYLGLDLRGGVHFLMEVDMDAVMEQTRQRYVDDLRALLRSKKVRYLGILKQPDGSLLLRFRDAAQRSAA 188
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A7C5J7B5_9GAMM (Protein translocase subunit SecD n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7C5J7B5_9GAMM) HSP 1 Score: 195 bits (496), Expect = 7.220e-56 Identity = 96/188 (51.06%), Postives = 132/188 (70.21%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKA 564
MN+YPLW+Y+L++V+V G++YALPNLYG+DPA+QIS R+ +D+ R V+ L+ + I E ++ +RF D A+ KAR+V+ + +GE YV AL + ATP WL AI A PMY+GLDLRGGVHFLM+VDMDA Q +ER+VS++R R EKIRY S+AR+ GG+ V F +E + KA
Sbjct: 1 MNQYPLWKYLLIVVVVIAGLVYALPNLYGEDPAVQISPLRATVIDEEAQMRFVNTLRNAQIDFTAVEKVQDKLFIRFADTSAQLKARDVLTEELGEDYVAALTLLPATPGWLAAIDADPMYLGLDLRGGVHFLMEVDMDAAVRQAEERYVSDIRAILRAEKIRYLSLARKNEGGIEVKFRSEADRDKA 188
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Match: A0A2N2ACP7_9GAMM (Protein translocase subunit SecD n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-1 TaxID=2013791 RepID=A0A2N2ACP7_9GAMM) HSP 1 Score: 195 bits (496), Expect = 7.330e-56 Identity = 101/191 (52.88%), Postives = 132/191 (69.11%), Query Frame = 1
Query: 1 MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATRVVDALKASNIAVKRTETHDKRVLLRFNDLDARTKAREVVEKTVGEHYVVALNMAAATPDWLRAIGAKPMYMGLDLRGGVHFLMQVDMDAVRTQTDERFVSELRTAFRDEKIRYRSIAREPTGGVRVSFLNEEMKHKAAPI 573
MN+YPLW+Y+L+ V++ +GV YALPNLYGDDPA+Q+ A R+ VD A R+ ALKA I +KR E +LLRF + + KA E+V +T+G +Y VALN+A ATP WLRAI A PMY+GLDLRGGVHFLMQVDMDA Q ER+VS+ RT R+ K+RY ++A G V F + E + +A +
Sbjct: 1 MNKYPLWKYLLIAVVLLVGVFYALPNLYGDDPAVQVLATRAGKVDGATLGRLEQALKAQGIELKRAELAGDTLLLRFTGTEPQLKAYELVRETLGGNYAVALNLAPATPGWLRAIDALPMYLGLDLRGGVHFLMQVDMDAAAAQALERYVSDWRTLLRENKLRYLTVATN-AGQVEARFRSAEERDQAQEL 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18170.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig18170.2.1 >prot_P-wetherbeei_contig18170.2.1 ID=prot_P-wetherbeei_contig18170.2.1|Name=mRNA_P-wetherbeei_contig18170.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp MNEYPLWRYILVLVIVTIGVLYALPNLYGDDPALQISARRSETVDDALATback to top mRNA from alignment at P-wetherbeei_contig18170:800..1372+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig18170.2.1 ID=mRNA_P-wetherbeei_contig18170.2.1|Name=mRNA_P-wetherbeei_contig18170.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig18170:800..1372+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig18170:800..1372+ >mRNA_P-wetherbeei_contig18170.2.1 ID=mRNA_P-wetherbeei_contig18170.2.1|Name=mRNA_P-wetherbeei_contig18170.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig18170:800..1372+ (Phaeothamnion wetherbeei SAG_119_79)back to top |