prot_P-wetherbeei_contig1816.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1816.2.1
Unique Nameprot_P-wetherbeei_contig1816.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length695
Homology
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.390e-42
Identity = 98/227 (43.17%), Postives = 135/227 (59.47%), Query Frame = 0
Query:    1 MADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQP-SADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVL 226
            +AD  SL++M + +G       R R +  R ++      ED +   D L CR+ +RT+ A A GA CEC  +GML+ ++SP HK+   E+ FDVMGFMQQLQR+ G      +VPNTL MA+ P  ADAR ITT++PP++I   + AWC LCG+  EE  GRT   +QGP TD AA+ R +  V       + +VNY K   PF N +  YPL+++   VTHYL  +
Sbjct:  231 IADVASLALMVESVG-------RCRPSERRVQVQYYAGPEDAITSGDMLSCRWMLRTENAAACGALCECHAQGMLRARYSPSHKLAHLELAFDVMGFMQQLQRASGLE-DFRVVPNTLAMAQAPCDADARFITTAEPPYLIVHASPAWCRLCGYASEEAVGRTAALLQGPATDRAAVARFMGAVRARHCCSMEVVNYTKAGVPFANYIVAYPLSTD-GRVTHYLATI 448          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S4I3L7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3L7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.340e-39
Identity = 88/202 (43.56%), Postives = 124/202 (61.39%), Query Frame = 0
Query:   37 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSAD-ARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQPV 231
            +  +D+L+  D LMC F  R+  AV  GA  EC   GML+ +FS ++K++  EM++D MGFMQQL+R+ G      +VPN+LEMA  P+ D ARVIT + PPF+I SVNE+W  +  +   EVEG+ +  + G RTD  A +R  K      +V+ GR AC   V+Y K  R F++ +  YPLT+  D +TH L V +E PV
Sbjct:  144 VNEDDMLLTEDVLMCPFVFRSQDAVQCGALAECVMPGMLRGQFSKRNKLLNVEMVYDAMGFMQQLERASGSEGAAQIVPNSLEMALSPNTDEARVITLAKPPFLIVSVNESWTRMTKYTQMEVEGKEMSILNGKRTDAQAGKRNSKPVHDFAEVSGGRCACSANVHYDKHGRDFVDFVCSYPLTNANDGITHILHVCKELPV 345          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S4I3G7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3G7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 7.190e-37
Identity = 88/202 (43.56%), Postives = 124/202 (61.39%), Query Frame = 0
Query:   37 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSAD-ARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQPV 231
            +  +D+L+  D LMC F  R+  AV  GA  EC   GML+ +FS ++K++  EM++D MGFMQQL+R+ G      +VPN+LEMA  P+ D ARVIT + PPF+I SVNE+W  +  +   EVEG+ +  + G RTD  A +R  K      +V+ GR AC   V+Y K  R F++ +  YPLT+  D +TH L V +E PV
Sbjct:  741 VNEDDMLLTEDVLMCPFVFRSQDAVQCGALAECVMPGMLRGQFSKRNKLLNVEMVYDAMGFMQQLERASGSEGAAQIVPNSLEMALSPNTDEARVITLAKPPFLIVSVNESWTRMTKYTQMEVEGKEMSILNGKRTDAQAGKRNSKPVHDFAEVSGGRCACSANVHYDKHGRDFVDFVCSYPLTNANDGITHILHVCKELPV 942          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S1VFG1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VFG1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.110e-36
Identity = 86/199 (43.22%), Postives = 121/199 (60.80%), Query Frame = 0
Query:   37 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRA------LKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQE 228
            +  +D+L+  D LMC F  R+  AV  GA  E    GML+  FS ++K+V+ EM++D MGFMQQL+R+ G      +VP +LEMA  P+  +ARVIT + PPF+I SVNE+W  +  +   EVEG+ L  + G RT+  A  R+      L++VA G+ AC T V+Y K  R F++    YPLT+  D VTH L V +E
Sbjct:  176 VNEDDMLLTDDILMCPFVFRSQDAVLCGALAEVIMPGMLRAHFSARNKLVSLEMVYDAMGFMQQLERASGSEGTAQIVPGSLEMALSPNTNEARVITLAKPPFLIVSVNESWTRMSKYTQMEVEGKELAILNGERTNPDAAVRSGKPPHKLEEVAAGKCACSTNVHYDKNGREFVDFTCSYPLTNANDTVTHILHVSRE 374          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S1Z127_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z127_9STRA)

HSP 1 Score: 145 bits (367), Expect = 5.240e-34
Identity = 80/201 (39.80%), Postives = 119/201 (59.20%), Query Frame = 0
Query:   37 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQP 230
            +  +D+L+  D LMC F  R+  AV  GA  EC   GML+  FS ++K+ + EM++D MGFMQQL+R+        ++PN+LEMA  P+  +ARVIT + PP++I SVNEAW     +   EVEG+ +  + G +TD  A +R  K      +VA G  AC   ++Y K  + F++ +  YPLT+  D +TH L + +E P
Sbjct:  227 VNEDDMLLTDDVLMCPFIFRSQDAVLCGALAECIMPGMLRAHFSSRNKLCSLEMVYDSMGFMQQLERASCSEGTAQIIPNSLEMALSPNTNEARVITLAKPPYLIVSVNEAWARTTKYTQMEVEGKEMSVLHGKKTDPDAGKRPGKPSHEMMEVAKGNCACSVNIHYDKHGKEFVDFVCSYPLTNGNDEITHILHICKELP 427          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A1Z5KBM7_FISSO (PAS domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBM7_FISSO)

HSP 1 Score: 148 bits (374), Expect = 1.140e-33
Identity = 84/201 (41.79%), Postives = 124/201 (61.69%), Query Frame = 0
Query:   39 SEDVLIMTDT-LMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRT-LRDIQGPRTDLAALRRA------LKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQP 230
            +ED +I+ D  LMC F  R+  AV  GA  +C   GML+  FS ++K+ + E+++D MGFMQQL+R+ G+     ++P +LEMA  P+  +ARVIT ++PPF I +VNEAW  + G+   EVEG+  +  ++G  T   A  R       L++VA+GRPAC T ++Y K  + FI  +  YPLT+  D +TH L V +E P
Sbjct:  516 NEDFMILVDNVLMCPFVFRSQDAVLCGALADCLMPGMLRASFSSRNKLSSIEIVYDAMGFMQQLERASGNEGSAQIIPGSLEMALAPTQLEARVITLAEPPFKIVNVNEAWTRITGYTQMEVEGKEYISLLEGEGTVQEAKVRPGKPHHLLEEVAMGRPACSTNIHYGKDGQDFIEFVCSYPLTNSYDQITHILHVSKELP 716          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S1Z1U9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z1U9_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.030e-33
Identity = 80/201 (39.80%), Postives = 119/201 (59.20%), Query Frame = 0
Query:   37 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQP 230
            +  +D+L+  D LMC F  R+  AV  GA  EC   GML+  FS ++K+ + EM++D MGFMQQL+R+        ++PN+LEMA  P+  +ARVIT + PP++I SVNEAW     +   EVEG+ +  + G +TD  A +R  K      +VA G  AC   ++Y K  + F++ +  YPLT+  D +TH L + +E P
Sbjct:  358 VNEDDMLLTDDVLMCPFIFRSQDAVLCGALAECIMPGMLRAHFSSRNKLCSLEMVYDSMGFMQQLERASCSEGTAQIIPNSLEMALSPNTNEARVITLAKPPYLIVSVNEAWARTTKYTQMEVEGKEMSVLHGKKTDPDAGKRPGKPSHEMMEVAKGNCACSVNIHYDKHGKEFVDFVCSYPLTNGNDEITHILHICKELP 558          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: B8CAF7_THAPS (PAS domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAF7_THAPS)

HSP 1 Score: 147 bits (371), Expect = 5.550e-33
Identity = 85/204 (41.67%), Postives = 117/204 (57.35%), Query Frame = 0
Query:   37 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQP-SADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRA------LKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQPVDA 233
            I  +D+++  D LMC F  R+  AV  GA  EC   GML+  FS  +K+   EM+FD MGF QQL+R+ G+     ++PN+LEMA  P S +ARVIT +  P+ I SVNE+W  + GF   + EG+ L  + G RTD  A RR+      +  V+ G+ AC   V+Y    R F+N +  YPLT+  + VTH L V  E P  A
Sbjct:  819 INEDDMILTDDVLMCPFIFRSQEAVWCGALAECVMPGMLRASFSATNKLKNVEMIFDAMGFCQQLERASGNEGMAQIIPNSLEMALTPNSEEARVITLAQAPYPIVSVNESWTRITGFTQLDAEGKDLSILHGERTDPDAGRRSGFPAHDMASVSQGQCACSVNVHYDINGREFLNFMSSYPLTNHKNEVTHILHVCHELPARA 1022          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A1E7FV49_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FV49_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.330e-32
Identity = 73/196 (37.24%), Postives = 112/196 (57.14%), Query Frame = 0
Query:   36 SITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQP 230
            ++  +D+ I+ D LMC F  RT  AV  GA  +C   GML+  FS  +K+++ E++FD MGFMQQL  + G  +   ++P +LEMA  P   +ARVIT +  P+ +  VNE W  L  +   E EG+ L  +    +  +    +L+DV  GRPAC T ++++K  + F++ +  YPLT+  D +T  L V  E P
Sbjct:   87 AVNEDDMNILDDVLMCPFVFRTQNAVLCGALTDCVVPGMLRANFSKNNKLLSMELVFDAMGFMQQLDGANGGNINAQVIPGSLEMALVPCPNEARVITEATSPYRVVHVNEQWTRLTSYTQTEAEGKPLLHLLLGDSSGSGADESLEDVTNGRPACSTNIHHRKIGKSFVDFMCSYPLTNATDEITQLLHVNTELP 282          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S2UG65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG65_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.720e-31
Identity = 81/218 (37.16%), Postives = 121/218 (55.50%), Query Frame = 0
Query:   13 VLGSGTANWPRARRAGAR---TRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDI-QGPRTDLAALRRA-----LKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVT 220
            V G G  N   + ++ ++   T+    I  +D+++  D LMC +  R+  AV  GA  EC   GML+  FS ++K+   EM++D MGFMQQL+R+ G      +VPN+LEMA  P+  +ARVIT +  PF+I SVNEAW  +  +   EVEG+ L  I    R+D A++ R        +V LGR      ++Y K     ++ +R YPLT+  D +T
Sbjct:    2 VSGKGADNETSSSQSSSQIVQTQAYYHINEDDIILTDDVLMCPYIFRSQDAVRCGALAECTMPGMLRATFSARNKLQNLEMVYDAMGFMQQLERAGGSEGECQIVPNSLEMALSPTTKEARVITQAKSPFLIVSVNEAWTRMTQYTQVEVEGKELLSILPEKRSDGASVTRKAPEHKFDEVTLGRCTSSVTLHYDKDGNEVVDYIRSYPLTNANDEIT 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CN81_9STRA2.390e-4243.17BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S4I3L7_9STRA2.340e-3943.56Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4I3G7_9STRA7.190e-3743.56Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1VFG1_9STRA1.110e-3643.22Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1Z127_9STRA5.240e-3439.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5KBM7_FISSO1.140e-3341.79PAS domain-containing protein n=2 Tax=Fistulifera ... [more]
A0A7S1Z1U9_9STRA3.030e-3339.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8CAF7_THAPS5.550e-3341.67PAS domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A1E7FV49_9STRA3.330e-3237.24Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2UG65_9STRA1.720e-3137.16Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 130..232
e-value: 7.6E-20
score: 73.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 639..669
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 640..654
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..379
NoneNo IPR availablePANTHERPTHR47429:SF5VIVID PAS PROTEIN VVDcoord: 126..224
NoneNo IPR availablePANTHERPTHR47429PROTEIN TWIN LOV 1coord: 126..224
IPR000014PAS domainPFAMPF13426PAS_9coord: 134..218
e-value: 8.8E-8
score: 32.4
IPR000014PAS domainCDDcd00130PAScoord: 131..228
e-value: 9.14094E-6
score: 43.0055
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 131..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1816contigP-wetherbeei_contig1816:2424..4688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1816.2.1mRNA_P-wetherbeei_contig1816.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1816 1784..5074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1816.2.1 ID=prot_P-wetherbeei_contig1816.2.1|Name=mRNA_P-wetherbeei_contig1816.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=695bp
MADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLM
CRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQ
LQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDL
CGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGD
RPFINALRMYPLTSEIDYVTHYLGVLQEQPVDAGGPGGPATLDWPVSASD
GGDGPAVAAGDEAAGIGASAAAAIAAALACASASVSAAAAVEGVAVAAGG
TATATMTAVAAECGGVIAMTDLEKPASAGGAAAPGAATVAAAAAAALDAA
TSSTQRAEALAATPAADGTAPEVLSPETGGAVTAVGAGAVGGAPEEQASG
SGPMAALAARGGKSTRGAATAAAAAAGGAVAAASSGRTTRGAARARGLRG
ANTSTPPSAASATTAPAAAANTAAANGATAHTAAANCAAANIAAVAGASG
AGGELTGAVPIPVVAAVSAPVPDSSPRDGQQMMTAVPPAMLMGPGGGGMM
GLGPAGSVGMGGGMGLGVGVGLPPYGGPGANLWSQSLVSQPGGGFGGGFG
GGPPGLPGLGGLGGIAGMGLPGMMTPEQAQQLMGWSLAFLPPPQPAPPQP
QGPGAAGSGPGGPMPFFAQMGMPGLGASLGGGADGVGVGKRQFG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf