mRNA_P-wetherbeei_contig1816.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1816.2.1
Unique NamemRNA_P-wetherbeei_contig1816.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: D8LH42_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH42_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.170e-65
Identity = 136/293 (46.42%), Postives = 176/293 (60.07%), Query Frame = 2
Query:  461 KTQVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGAR--TRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKF-SPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSE-IDYVTHYLGVLQEQ 1327
            K Q ++ F  +RC   ++R +WA IVDE VT+TLPITPYR F    + N+SRVL G+D VM D  SL+V+ + LG GT  W +    G      LVC +   D+L   +T MC F +RT  AV  GAR E   RGML  KF +    +VA E +FDV   MQQLQ+ +G+   MP+VPNT   A QPS +ARVI T+ PP  +   N+AW  LCG+  E++ G+TL+ IQGPRTD   L    +++  GR A   L NYK     F+N LR+YPL  +    VTH LGVLQEQ
Sbjct:   63 KRQNLRTFMKFRCKNVKNREKWAEIVDERVTMTLPITPYRWFNGRCVFNDSRVLRGIDDVMTDNGSLAVLVESLGCGTLPWRQEMEKGHGHGVELVCEMADNDMLTSHNTAMCSFVLRTTNAVKHGARREWRCRGMLSAKFIAGSAMLVAIEHVFDVTSLMQQLQKVVGEEKEMPVVPNTTRGACQPSNEARVIMTATPPHTVVCCNQAWTKLCGYSQEDIRGQTLKAIQGPRTDAGGLAALNREIERGRAASAVLPNYKSDGSEFLNYLRVYPLVGDGRGTVTHILGVLQEQ 355          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.980e-61
Identity = 125/290 (43.10%), Postives = 176/290 (60.69%), Query Frame = 2
Query:  452 QNKKTQVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQP-SADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVL 1318
            Q+ +  V+Q+   YR  G   RA WA  ++E+ T  LPITPYRSF  +E+V+  R++ G+DA++AD  SL++M + +G       R R +  R ++      ED +   D L CR+ +RT+ A A GA CEC  +GML+ ++SP HK+   E+ FDVMGFMQQLQR+ G      +VPNTL MA+ P  ADAR ITT++PP++I   + AWC LCG+  EE  GRT   +QGP TD AA+ R +  V       + +VNY K   PF N +  YPL+++   VTHYL  +
Sbjct:  168 QSVRFSVLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQRMIVGIDAMIADVASLALMVESVG-------RCRPSERRVQVQYYAGPEDAITSGDMLSCRWMLRTENAAACGALCECHAQGMLRARYSPSHKLAHLELAFDVMGFMQQLQRASGLE-DFRVVPNTLAMAQAPCDADARFITTAEPPYLIVHASPAWCRLCGYASEEAVGRTAALLQGPATDRAAVARFMGAVRARHCCSMEVVNYTKAGVPFANYIVAYPLSTD-GRVTHYLATI 448          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA)

HSP 1 Score: 196 bits (497), Expect = 3.440e-51
Identity = 115/281 (40.93%), Postives = 156/281 (55.52%), Query Frame = 2
Query:  494 RCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTR---LVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEID-YVTHYLGVLQE 1324
            R  G  D A+W+ I+ E   +T+P+TPYRSF  S++VNN RVL G+D ++AD  SL VM D +G+ T      R+   R R   L+ S  +E+       LMC F +RT  A A GA CEC K G+L+ +F     I   EM FD +    QL R+ G G   PLVPNTL    +   D  V+TT+  PF I  VN AW  LCGF  +E +G+ L  +QGP TD+  +   +     G PA + + NY K  RPF N LR YP++S+    ++H +G L E
Sbjct:  122 RAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRRVLLGVDGMVADTASLQVMLDNIGTKT------RKNEGRVRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDAKAHGAACECEKSGILRARFDDAGCIEELEMAFDGIAMYHQLMRAKGQG-DFPLVPNTLNAVLKNDKDHIVVTTAQRPFRITHVNGAWTQLCGFELDECKGKNLSILQGPETDMDTVTELVDISQRGYPASMVVTNYDKSGRPFRNHLRCYPISSDDSGEISHIVGYLDE 395          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S4D930_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D930_HETAK)

HSP 1 Score: 189 bits (480), Expect = 1.030e-48
Identity = 93/184 (50.54%), Postives = 128/184 (69.57%), Query Frame = 2
Query:  452 QNKKTQVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMA 1003
            Q+ + +VV+     R    +DR +W+ I+DE  T T PITPY+SF RSEI+N+SRVLFG+DA + D  S  VM + +G GTA W  ++  G   RL+ SI  + V++  D LMC F V+TD AV SGA CEC ++GMLQ KF+P++K+V+ +M+FDVM FMQQLQR+ G    MP+VPNT+E+A
Sbjct:  200 QSIRRRVVEALMELRVQVIQDRVQWSKILDEAFTFTQPITPYQSFNRSEIMNSSRVLFGIDACLRDTASFGVMANSIGIGTAKWRESQLQGKPVRLISSIDVDSVILKGDVLMCSFEVKTDNAVESGAFCECYQQGMLQCKFTPENKLVSVDMVFDVMSFMQQLQRASGPYAQMPIVPNTVELA 383          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 5.650e-42
Identity = 108/302 (35.76%), Postives = 158/302 (52.32%), Query Frame = 2
Query:  467 QVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKF-SPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTS-EIDYVTHYLGVLQEQPVDAGGPGGPATL 1366
            Q ++  F  R  G  D A W  ++   + +T+PITPYRSF  +++VNN RVL G+D +++D  SLSV+ D +G  T  +        +  L             D LMC F +RT  AV   AR E    GM++V+F S  +KI   +M FD +   QQL  + G     P VPNTL+ A +      V+TT+  PF I  VN+AW +LCGF  EE EG++L  +QGP TD+  + +  K    G    + + N+ K    F N L+ YP++S E   ++H +G+L   P +   P   +TL
Sbjct:  150 QALRKVFDLRADGCTDEASWLEVLSPDLRMTMPITPYRSFNPADVVNNRRVLLGVDGMISDTQSLSVLLDNIGVKTRLYESP--VSIKFTLASDADEGGAFFSRDGLMCSFTMRTLDAVKHAARREWEVNGMVRVRFNSDTNKIEELDMTFDAISCYQQLMLASGKE-DFPPVPNTLDNALKDETSPIVVTTAARPFRITHVNKAWTELCGFELEECEGKSLSILQGPETDMTRVDKLCKLSQKGYATSMVVTNHNKKGELFRNHLQCYPVSSDEPGEISHIVGMLTAIPSENKNPRASSTL 448          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S3UTR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTR3_HETAK)

HSP 1 Score: 165 bits (417), Expect = 7.620e-40
Identity = 116/301 (38.54%), Postives = 152/301 (50.50%), Query Frame = 2
Query:  461 KTQVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKH---------KIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLR--DIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDR-PFINALRMYPLTSEIDYVT-HYLGVLQE 1324
            K Q VQ FF+YR  GE DR RWA +++E V LT PITPYRSF   E+V N R + G+D V+ D  SL V+   LG    +   A R          +  ED +++   LMCR+ +RT  AV  G  CE    GML+ +F             K+    ++FDVM FMQQLQR  G      +VPNT+ MA+Q + +AR++  + PP+ +A VN AW  L G   EEV GR L   D  GP    + + RA     L R AC  L       R  F   +  YPL ++      HYL V  E
Sbjct:  186 KFQAVQTFFYYRATGELDRGRWAALLEEDVVLTQPITPYRSFDAREVVQNMREVRGVDGVVKDTASLGVLTKSLGRPGNSEDVALRY--------YVAKEDTVVVGRALMCRWMLRTVNAVQCGGLCELYNHGMLRAEFGEPSSDGPPGGGCKLRRLRLVFDVMSFMQQLQRCSGKAC-FHIVPNTVAMAKQGADEARLVCAAQPPYAVAHVNRAWQALFGQGLEEVYGRPLAFLDGGGPGAAESVVARADDQFPLQR-ACSFLARANSRYRMAFPARVCAYPLAADPPRRPGHYLLVFHE 476          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S4I3L7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3L7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 8.800e-39
Identity = 88/202 (43.56%), Postives = 124/202 (61.39%), Query Frame = 2
Query:  749 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSAD-ARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQPV 1333
            +  +D+L+  D LMC F  R+  AV  GA  EC   GML+ +FS ++K++  EM++D MGFMQQL+R+ G      +VPN+LEMA  P+ D ARVIT + PPF+I SVNE+W  +  +   EVEG+ +  + G RTD  A +R  K      +V+ GR AC   V+Y K  R F++ +  YPLT+  D +TH L V +E PV
Sbjct:  144 VNEDDMLLTEDVLMCPFVFRSQDAVQCGALAECVMPGMLRGQFSKRNKLLNVEMVYDAMGFMQQLERASGSEGAAQIVPNSLEMALSPNTDEARVITLAKPPFLIVSVNESWTRMTKYTQMEVEGKEMSILNGKRTDAQAGKRNSKPVHDFAEVSGGRCACSANVHYDKHGRDFVDFVCSYPLTNANDGITHILHVCKELPV 345          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S1VFG1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VFG1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.470e-36
Identity = 86/199 (43.22%), Postives = 121/199 (60.80%), Query Frame = 2
Query:  749 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRA------LKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQE 1324
            +  +D+L+  D LMC F  R+  AV  GA  E    GML+  FS ++K+V+ EM++D MGFMQQL+R+ G      +VP +LEMA  P+  +ARVIT + PPF+I SVNE+W  +  +   EVEG+ L  + G RT+  A  R+      L++VA G+ AC T V+Y K  R F++    YPLT+  D VTH L V +E
Sbjct:  176 VNEDDMLLTDDILMCPFVFRSQDAVLCGALAEVIMPGMLRAHFSARNKLVSLEMVYDAMGFMQQLERASGSEGTAQIVPGSLEMALSPNTNEARVITLAKPPFLIVSVNESWTRMSKYTQMEVEGKELAILNGERTNPDAAVRSGKPPHKLEEVAAGKCACSTNVHYDKNGREFVDFTCSYPLTNANDTVTHILHVSRE 374          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S4I3G7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3G7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.580e-36
Identity = 88/202 (43.56%), Postives = 124/202 (61.39%), Query Frame = 2
Query:  749 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSAD-ARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQPV 1333
            +  +D+L+  D LMC F  R+  AV  GA  EC   GML+ +FS ++K++  EM++D MGFMQQL+R+ G      +VPN+LEMA  P+ D ARVIT + PPF+I SVNE+W  +  +   EVEG+ +  + G RTD  A +R  K      +V+ GR AC   V+Y K  R F++ +  YPLT+  D +TH L V +E PV
Sbjct:  741 VNEDDMLLTEDVLMCPFVFRSQDAVQCGALAECVMPGMLRGQFSKRNKLLNVEMVYDAMGFMQQLERASGSEGAAQIVPNSLEMALSPNTDEARVITLAKPPFLIVSVNESWTRMTKYTQMEVEGKEMSILNGKRTDAQAGKRNSKPVHDFAEVSGGRCACSANVHYDKHGRDFVDFVCSYPLTNANDGITHILHVCKELPV 942          
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S1Z127_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z127_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.460e-33
Identity = 80/201 (39.80%), Postives = 119/201 (59.20%), Query Frame = 2
Query:  749 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQP 1330
            +  +D+L+  D LMC F  R+  AV  GA  EC   GML+  FS ++K+ + EM++D MGFMQQL+R+        ++PN+LEMA  P+  +ARVIT + PP++I SVNEAW     +   EVEG+ +  + G +TD  A +R  K      +VA G  AC   ++Y K  + F++ +  YPLT+  D +TH L + +E P
Sbjct:  227 VNEDDMLLTDDVLMCPFIFRSQDAVLCGALAECIMPGMLRAHFSSRNKLCSLEMVYDSMGFMQQLERASCSEGTAQIIPNSLEMALSPNTNEARVITLAKPPYLIVSVNEAWARTTKYTQMEVEGKEMSVLHGKKTDPDAGKRPGKPSHEMMEVAKGNCACSVNIHYDKHGKEFVDFVCSYPLTNGNDEITHILHICKELP 427          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH42_ECTSI1.170e-6546.42PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CN81_9STRA1.980e-6143.10BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836C6X3_9STRA3.440e-5140.93BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S4D930_HETAK1.030e-4850.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5K0R4_9PHAE5.650e-4235.76PAS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3UTR3_HETAK7.620e-4038.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4I3L7_9STRA8.800e-3943.56Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1VFG1_9STRA3.470e-3643.22Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4I3G7_9STRA4.580e-3643.56Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1Z127_9STRA1.460e-3339.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1816contigP-wetherbeei_contig1816:1784..5074 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LH42
PFAMsPAS_9
Model size3111
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.47e-46
EggNOG OGs2CY5M@1|root,2S26N@2759|Eukaryota
DescriptionPAS domain
Cds size2085
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186137.6974728-UTR-P-wetherbeei_contig1816:1783..24231683186137.6974728-UTR-P-wetherbeei_contig1816:1783..2423Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1816 1784..2423 +
1683186137.7340486-UTR-P-wetherbeei_contig1816:4688..50741683186137.7340486-UTR-P-wetherbeei_contig1816:4688..5074Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1816 4689..5074 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186137.707486-CDS-P-wetherbeei_contig1816:2423..26511683186137.707486-CDS-P-wetherbeei_contig1816:2423..2651Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1816 2424..2651 +
1683186137.7195253-CDS-P-wetherbeei_contig1816:2831..46881683186137.7195253-CDS-P-wetherbeei_contig1816:2831..4688Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1816 2832..4688 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1816.2.1prot_P-wetherbeei_contig1816.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1816 2424..4688 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1816.2.1

>prot_P-wetherbeei_contig1816.2.1 ID=prot_P-wetherbeei_contig1816.2.1|Name=mRNA_P-wetherbeei_contig1816.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=695bp
MADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLM
CRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQ
LQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDL
CGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGD
RPFINALRMYPLTSEIDYVTHYLGVLQEQPVDAGGPGGPATLDWPVSASD
GGDGPAVAAGDEAAGIGASAAAAIAAALACASASVSAAAAVEGVAVAAGG
TATATMTAVAAECGGVIAMTDLEKPASAGGAAAPGAATVAAAAAAALDAA
TSSTQRAEALAATPAADGTAPEVLSPETGGAVTAVGAGAVGGAPEEQASG
SGPMAALAARGGKSTRGAATAAAAAAGGAVAAASSGRTTRGAARARGLRG
ANTSTPPSAASATTAPAAAANTAAANGATAHTAAANCAAANIAAVAGASG
AGGELTGAVPIPVVAAVSAPVPDSSPRDGQQMMTAVPPAMLMGPGGGGMM
GLGPAGSVGMGGGMGLGVGVGLPPYGGPGANLWSQSLVSQPGGGFGGGFG
GGPPGLPGLGGLGGIAGMGLPGMMTPEQAQQLMGWSLAFLPPPQPAPPQP
QGPGAAGSGPGGPMPFFAQMGMPGLGASLGGGADGVGVGKRQFG*
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mRNA from alignment at P-wetherbeei_contig1816:1784..5074+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1816.2.1 ID=mRNA_P-wetherbeei_contig1816.2.1|Name=mRNA_P-wetherbeei_contig1816.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3291bp|location=Sequence derived from alignment at P-wetherbeei_contig1816:1784..5074+ (Phaeothamnion wetherbeei SAG_119_79)
AGCTCAGCGCCACGAAGGAGCGCGAGGACTCGGAGCGGCGGCTCTGCGAC ACGCGGTCCGCGGAGACGCGGGAGCTGCGGAAGCAGGTAATGTTATTGAT CGCGGGACTTTTGCGAGGCGCGCCGCTTCTCGCCATGGTGTTTCCCTGAC AGCGTTGTTTCGCGCTGCCGCCGCTGCCCCCATCGCCGCGCCAAGCGGTT CCGGGCTTGTGGCTGTCTGTGCCGGTTTCCTTTTTGCCACGGGCTGGGGA TGCGGTTTGCGAAGAGCGTTGCAAAGTCTCAGTCTTCCGACTTCTCACTG TTTGCTTTCATCTATGTTTGCTTCTCGCCCCGGCTTCTGGTTCTGCGGTC GCATGGCCGCCACCGCCGCCGCCCTCGCAGTTCTCCCCTCCCTTTCCGCC TCCCGCGACAACAAATTACCGATAAAACGGAAACGAACGTGAAAATGAAA ACAAAACAAAAAAACACAGGTCGTGCAACTCTTCTTCCACTACCGCTGCG TGGGGGAGCGAGACCGCGCGCGATGGGCCGTCATCGTCGACGAAACCGTC ACGCTGACGCTGCCCATCACGCCCTACCGCAGCTTTCGCCGCTCGGAGAT CGTCAACAACTCTCGCGTACTCTTCGGCCTCGATGCAGTCATGGCGGACG CCTGCAGCCTCTCCGTCATGGGCGACGTGCTCGGCAGCGGCACGGCCAAC TGGCCGCGGGCGCGGCGGGCCGGCGCGCGGACGCGGCTGGTGTGCAGCAT CACTTCTGAGGACGTCCTAATCATGACCGACACGCTCATGTGCCGCTTTG CGGTGCGCACGGACGGCGCGGTGGCGAGCGGCGCGCGCTGCGAGTGCGCC AAGCGCGGCATGCTGCAGGTGAATGAAGGTTTTTATTTTCTGTTCCAGAC TGGCCTGTCGCGGCACACAACAAACTTTTGATTCAAAGCCAAACGACTCA GCGGCTCCCAAACCTCAATTCAGGTACTCAAAAAGACTCCGATTTGCTAA ACCCTAACCCCATAACCGCAACGCTTAACGGTTAACGTGAAAAAACAGGT TAAGTTTTCGCCGAAGCACAAGATTGTTGCGGCCGAGATGATGTTCGACG TCATGGGCTTCATGCAGCAGCTGCAGCGCTCGCTCGGCGATGGCGTGCCA ATGCCACTCGTGCCCAACACGCTCGAGATGGCGCGCCAGCCGTCCGCCGA CGCGCGTGTCATCACCACTTCGGACCCGCCGTTCGTCATCGCGTCCGTCA ATGAGGCATGGTGCGACCTCTGCGGGTTCCGCCCGGAAGAGGTGGAGGGC CGGACGCTGCGGGACATACAGGGTCCGCGCACGGACCTGGCGGCGCTGCG GAGGGCCCTGAAGGACGTGGCGCTCGGCCGGCCAGCGTGCGTCACGCTTG TCAACTACAAGAAAGGGGACCGGCCGTTCATCAACGCGCTGCGCATGTAC CCGCTCACGTCGGAGATCGACTATGTCACGCACTACCTCGGCGTGCTTCA GGAGCAGCCGGTGGACGCCGGGGGGCCCGGCGGCCCCGCCACGTTAGACT GGCCGGTGTCGGCGAGCGACGGCGGCGACGGTCCAGCCGTGGCGGCGGGC GACGAGGCGGCTGGAATCGGCGCGTCCGCCGCCGCCGCCATTGCCGCCGC GCTGGCGTGCGCAAGCGCCAGCGTGAGCGCCGCCGCGGCGGTGGAGGGCG TTGCCGTCGCGGCGGGGGGTACGGCGACGGCGACGATGACTGCGGTGGCC GCTGAGTGCGGCGGTGTCATCGCCATGACGGACCTGGAAAAGCCAGCGTC GGCTGGCGGCGCCGCGGCACCCGGTGCGGCGACGGTGGCGGCGGCTGCCG CCGCGGCTCTGGACGCAGCGACTTCATCAACTCAAAGAGCCGAAGCGCTG GCTGCCACTCCGGCAGCAGATGGGACGGCGCCCGAAGTCTTGAGCCCAGA GACGGGCGGCGCGGTGACAGCGGTGGGCGCTGGTGCCGTCGGAGGCGCTC CGGAGGAGCAAGCGTCGGGATCGGGTCCGATGGCAGCCCTGGCGGCGAGA GGTGGCAAGTCAACAAGGGGGGCCGCAACAGCTGCGGCGGCAGCGGCAGG CGGAGCCGTCGCCGCGGCGTCTTCGGGGCGAACGACAAGAGGAGCGGCAC GGGCGAGGGGGCTTCGAGGAGCCAACACTTCAACCCCGCCTTCTGCGGCG TCGGCGACCACCGCCCCCGCCGCCGCGGCCAACACCGCCGCGGCCAACGG CGCGACGGCCCACACTGCCGCGGCAAACTGCGCCGCAGCCAACATCGCAG CCGTCGCAGGGGCGTCCGGCGCAGGCGGGGAGCTGACCGGGGCCGTGCCG ATCCCTGTGGTGGCGGCCGTGTCGGCGCCGGTGCCGGACTCGTCACCGCG CGACGGGCAGCAAATGATGACGGCGGTCCCGCCGGCCATGCTGATGGGGC CCGGCGGCGGTGGCATGATGGGGCTGGGGCCAGCGGGCTCTGTGGGCATG GGCGGCGGCATGGGGCTTGGCGTCGGAGTCGGCCTGCCGCCGTACGGTGG GCCCGGCGCGAACCTCTGGTCGCAATCGCTGGTCTCGCAACCCGGCGGCG GCTTCGGCGGCGGCTTCGGCGGCGGCCCGCCCGGCCTGCCGGGCCTGGGC GGGCTCGGTGGCATCGCTGGCATGGGGCTGCCGGGGATGATGACGCCCGA GCAGGCCCAGCAGCTCATGGGCTGGTCGCTGGCCTTCCTGCCGCCGCCGC AGCCTGCACCGCCGCAGCCGCAGGGGCCCGGGGCGGCGGGGAGCGGGCCC GGAGGACCGATGCCGTTCTTTGCTCAAATGGGCATGCCCGGACTTGGGGC ATCGCTCGGCGGAGGCGCCGACGGCGTGGGGGTCGGGAAGAGGCAGTTTG GTTGAATTTCGGGTGGTGGGAGGGCGAAAGTGATGCTTCTGAGACTATAC TCGGGGGGGAGGCCCTCGAAACAAGAAATGTAAAAGGGGCGGTTTTTCCT TTTTCTTGACGAGGGGCCACCAGGAGAGGGGAAGGCTGCCGGCGTCGCAG GAGGGAGGGAGAGCGCGTCGCGGGGCTGGCATTGCTGCCGCTTCCGAGGA TCGGCCACGTGTTTCGCCGCTGCGAGTTCAATGTTTCAGACCGCTCGCTA CTCGGAACGAAGCGTCTTTTTTGGGGAGGGGGGGTGAAGCAGCGCGCTCT GGCCTCTTTTCCCGGTGCGACTATTGATGGCGGCATCGGGTGCTCGTTCC ACACAAAGAATATCTACAGGAAATAAAAGCTGTACCAAGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1816:1784..5074+

>mRNA_P-wetherbeei_contig1816.2.1 ID=mRNA_P-wetherbeei_contig1816.2.1|Name=mRNA_P-wetherbeei_contig1816.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2085bp|location=Sequence derived from alignment at P-wetherbeei_contig1816:1784..5074+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGACGCCTGCAGCCTCTCCGTCATGGGCGACGTGCTCGGCAGCGG
CACGGCCAACTGGCCGCGGGCGCGGCGGGCCGGCGCGCGGACGCGGCTGG
TGTGCAGCATCACTTCTGAGGACGTCCTAATCATGACCGACACGCTCATG
TGCCGCTTTGCGGTGCGCACGGACGGCGCGGTGGCGAGCGGCGCGCGCTG
CGAGTGCGCCAAGCGCGGCATGCTGCAGGTTAAGTTTTCGCCGAAGCACA
AGATTGTTGCGGCCGAGATGATGTTCGACGTCATGGGCTTCATGCAGCAG
CTGCAGCGCTCGCTCGGCGATGGCGTGCCAATGCCACTCGTGCCCAACAC
GCTCGAGATGGCGCGCCAGCCGTCCGCCGACGCGCGTGTCATCACCACTT
CGGACCCGCCGTTCGTCATCGCGTCCGTCAATGAGGCATGGTGCGACCTC
TGCGGGTTCCGCCCGGAAGAGGTGGAGGGCCGGACGCTGCGGGACATACA
GGGTCCGCGCACGGACCTGGCGGCGCTGCGGAGGGCCCTGAAGGACGTGG
CGCTCGGCCGGCCAGCGTGCGTCACGCTTGTCAACTACAAGAAAGGGGAC
CGGCCGTTCATCAACGCGCTGCGCATGTACCCGCTCACGTCGGAGATCGA
CTATGTCACGCACTACCTCGGCGTGCTTCAGGAGCAGCCGGTGGACGCCG
GGGGGCCCGGCGGCCCCGCCACGTTAGACTGGCCGGTGTCGGCGAGCGAC
GGCGGCGACGGTCCAGCCGTGGCGGCGGGCGACGAGGCGGCTGGAATCGG
CGCGTCCGCCGCCGCCGCCATTGCCGCCGCGCTGGCGTGCGCAAGCGCCA
GCGTGAGCGCCGCCGCGGCGGTGGAGGGCGTTGCCGTCGCGGCGGGGGGT
ACGGCGACGGCGACGATGACTGCGGTGGCCGCTGAGTGCGGCGGTGTCAT
CGCCATGACGGACCTGGAAAAGCCAGCGTCGGCTGGCGGCGCCGCGGCAC
CCGGTGCGGCGACGGTGGCGGCGGCTGCCGCCGCGGCTCTGGACGCAGCG
ACTTCATCAACTCAAAGAGCCGAAGCGCTGGCTGCCACTCCGGCAGCAGA
TGGGACGGCGCCCGAAGTCTTGAGCCCAGAGACGGGCGGCGCGGTGACAG
CGGTGGGCGCTGGTGCCGTCGGAGGCGCTCCGGAGGAGCAAGCGTCGGGA
TCGGGTCCGATGGCAGCCCTGGCGGCGAGAGGTGGCAAGTCAACAAGGGG
GGCCGCAACAGCTGCGGCGGCAGCGGCAGGCGGAGCCGTCGCCGCGGCGT
CTTCGGGGCGAACGACAAGAGGAGCGGCACGGGCGAGGGGGCTTCGAGGA
GCCAACACTTCAACCCCGCCTTCTGCGGCGTCGGCGACCACCGCCCCCGC
CGCCGCGGCCAACACCGCCGCGGCCAACGGCGCGACGGCCCACACTGCCG
CGGCAAACTGCGCCGCAGCCAACATCGCAGCCGTCGCAGGGGCGTCCGGC
GCAGGCGGGGAGCTGACCGGGGCCGTGCCGATCCCTGTGGTGGCGGCCGT
GTCGGCGCCGGTGCCGGACTCGTCACCGCGCGACGGGCAGCAAATGATGA
CGGCGGTCCCGCCGGCCATGCTGATGGGGCCCGGCGGCGGTGGCATGATG
GGGCTGGGGCCAGCGGGCTCTGTGGGCATGGGCGGCGGCATGGGGCTTGG
CGTCGGAGTCGGCCTGCCGCCGTACGGTGGGCCCGGCGCGAACCTCTGGT
CGCAATCGCTGGTCTCGCAACCCGGCGGCGGCTTCGGCGGCGGCTTCGGC
GGCGGCCCGCCCGGCCTGCCGGGCCTGGGCGGGCTCGGTGGCATCGCTGG
CATGGGGCTGCCGGGGATGATGACGCCCGAGCAGGCCCAGCAGCTCATGG
GCTGGTCGCTGGCCTTCCTGCCGCCGCCGCAGCCTGCACCGCCGCAGCCG
CAGGGGCCCGGGGCGGCGGGGAGCGGGCCCGGAGGACCGATGCCGTTCTT
TGCTCAAATGGGCATGCCCGGACTTGGGGCATCGCTCGGCGGAGGCGCCG
ACGGCGTGGGGGTCGGGAAGAGGCAGTTTGGTTGA
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