mRNA_P-wetherbeei_contig1816.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: D8LH42_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH42_ECTSI) HSP 1 Score: 244 bits (623), Expect = 1.170e-65 Identity = 136/293 (46.42%), Postives = 176/293 (60.07%), Query Frame = 2
Query: 461 KTQVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGAR--TRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKF-SPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSE-IDYVTHYLGVLQEQ 1327
K Q ++ F +RC ++R +WA IVDE VT+TLPITPYR F + N+SRVL G+D VM D SL+V+ + LG GT W + G LVC + D+L +T MC F +RT AV GAR E RGML KF + +VA E +FDV MQQLQ+ +G+ MP+VPNT A QPS +ARVI T+ PP + N+AW LCG+ E++ G+TL+ IQGPRTD L +++ GR A L NYK F+N LR+YPL + VTH LGVLQEQ
Sbjct: 63 KRQNLRTFMKFRCKNVKNREKWAEIVDERVTMTLPITPYRWFNGRCVFNDSRVLRGIDDVMTDNGSLAVLVESLGCGTLPWRQEMEKGHGHGVELVCEMADNDMLTSHNTAMCSFVLRTTNAVKHGARREWRCRGMLSAKFIAGSAMLVAIEHVFDVTSLMQQLQKVVGEEKEMPVVPNTTRGACQPSNEARVIMTATPPHTVVCCNQAWTKLCGYSQEDIRGQTLKAIQGPRTDAGGLAALNREIERGRAASAVLPNYKSDGSEFLNYLRVYPLVGDGRGTVTHILGVLQEQ 355
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA) HSP 1 Score: 229 bits (584), Expect = 1.980e-61 Identity = 125/290 (43.10%), Postives = 176/290 (60.69%), Query Frame = 2
Query: 452 QNKKTQVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQP-SADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVL 1318
Q+ + V+Q+ YR G RA WA ++E+ T LPITPYRSF +E+V+ R++ G+DA++AD SL++M + +G R R + R ++ ED + D L CR+ +RT+ A A GA CEC +GML+ ++SP HK+ E+ FDVMGFMQQLQR+ G +VPNTL MA+ P ADAR ITT++PP++I + AWC LCG+ EE GRT +QGP TD AA+ R + V + +VNY K PF N + YPL+++ VTHYL +
Sbjct: 168 QSVRFSVLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQRMIVGIDAMIADVASLALMVESVG-------RCRPSERRVQVQYYAGPEDAITSGDMLSCRWMLRTENAAACGALCECHAQGMLRARYSPSHKLAHLELAFDVMGFMQQLQRASGLE-DFRVVPNTLAMAQAPCDADARFITTAEPPYLIVHASPAWCRLCGYASEEAVGRTAALLQGPATDRAAVARFMGAVRARHCCSMEVVNYTKAGVPFANYIVAYPLSTD-GRVTHYLATI 448
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.440e-51 Identity = 115/281 (40.93%), Postives = 156/281 (55.52%), Query Frame = 2
Query: 494 RCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTR---LVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEID-YVTHYLGVLQE 1324
R G D A+W+ I+ E +T+P+TPYRSF S++VNN RVL G+D ++AD SL VM D +G+ T R+ R R L+ S +E+ LMC F +RT A A GA CEC K G+L+ +F I EM FD + QL R+ G G PLVPNTL + D V+TT+ PF I VN AW LCGF +E +G+ L +QGP TD+ + + G PA + + NY K RPF N LR YP++S+ ++H +G L E
Sbjct: 122 RAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRRVLLGVDGMVADTASLQVMLDNIGTKT------RKNEGRVRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDAKAHGAACECEKSGILRARFDDAGCIEELEMAFDGIAMYHQLMRAKGQG-DFPLVPNTLNAVLKNDKDHIVVTTAQRPFRITHVNGAWTQLCGFELDECKGKNLSILQGPETDMDTVTELVDISQRGYPASMVVTNYDKSGRPFRNHLRCYPISSDDSGEISHIVGYLDE 395
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S4D930_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D930_HETAK) HSP 1 Score: 189 bits (480), Expect = 1.030e-48 Identity = 93/184 (50.54%), Postives = 128/184 (69.57%), Query Frame = 2
Query: 452 QNKKTQVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMA 1003
Q+ + +VV+ R +DR +W+ I+DE T T PITPY+SF RSEI+N+SRVLFG+DA + D S VM + +G GTA W ++ G RL+ SI + V++ D LMC F V+TD AV SGA CEC ++GMLQ KF+P++K+V+ +M+FDVM FMQQLQR+ G MP+VPNT+E+A
Sbjct: 200 QSIRRRVVEALMELRVQVIQDRVQWSKILDEAFTFTQPITPYQSFNRSEIMNSSRVLFGIDACLRDTASFGVMANSIGIGTAKWRESQLQGKPVRLISSIDVDSVILKGDVLMCSFEVKTDNAVESGAFCECYQQGMLQCKFTPENKLVSVDMVFDVMSFMQQLQRASGPYAQMPIVPNTVELA 383
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE) HSP 1 Score: 171 bits (432), Expect = 5.650e-42 Identity = 108/302 (35.76%), Postives = 158/302 (52.32%), Query Frame = 2
Query: 467 QVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKF-SPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDRPFINALRMYPLTS-EIDYVTHYLGVLQEQPVDAGGPGGPATL 1366
Q ++ F R G D A W ++ + +T+PITPYRSF +++VNN RVL G+D +++D SLSV+ D +G T + + L D LMC F +RT AV AR E GM++V+F S +KI +M FD + QQL + G P VPNTL+ A + V+TT+ PF I VN+AW +LCGF EE EG++L +QGP TD+ + + K G + + N+ K F N L+ YP++S E ++H +G+L P + P +TL
Sbjct: 150 QALRKVFDLRADGCTDEASWLEVLSPDLRMTMPITPYRSFNPADVVNNRRVLLGVDGMISDTQSLSVLLDNIGVKTRLYESP--VSIKFTLASDADEGGAFFSRDGLMCSFTMRTLDAVKHAARREWEVNGMVRVRFNSDTNKIEELDMTFDAISCYQQLMLASGKE-DFPPVPNTLDNALKDETSPIVVTTAARPFRITHVNKAWTELCGFELEECEGKSLSILQGPETDMTRVDKLCKLSQKGYATSMVVTNHNKKGELFRNHLQCYPVSSDEPGEISHIVGMLTAIPSENKNPRASSTL 448
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S3UTR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTR3_HETAK) HSP 1 Score: 165 bits (417), Expect = 7.620e-40 Identity = 116/301 (38.54%), Postives = 152/301 (50.50%), Query Frame = 2
Query: 461 KTQVVQLFFHYRCVGERDRARWAVIVDETVTLTLPITPYRSFRRSEIVNNSRVLFGLDAVMADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKH---------KIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSADARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLR--DIQGPRTDLAALRRALKDVALGRPACVTLVNYKKGDR-PFINALRMYPLTSEIDYVT-HYLGVLQE 1324
K Q VQ FF+YR GE DR RWA +++E V LT PITPYRSF E+V N R + G+D V+ D SL V+ LG + A R + ED +++ LMCR+ +RT AV G CE GML+ +F K+ ++FDVM FMQQLQR G +VPNT+ MA+Q + +AR++ + PP+ +A VN AW L G EEV GR L D GP + + RA L R AC L R F + YPL ++ HYL V E
Sbjct: 186 KFQAVQTFFYYRATGELDRGRWAALLEEDVVLTQPITPYRSFDAREVVQNMREVRGVDGVVKDTASLGVLTKSLGRPGNSEDVALRY--------YVAKEDTVVVGRALMCRWMLRTVNAVQCGGLCELYNHGMLRAEFGEPSSDGPPGGGCKLRRLRLVFDVMSFMQQLQRCSGKAC-FHIVPNTVAMAKQGADEARLVCAAQPPYAVAHVNRAWQALFGQGLEEVYGRPLAFLDGGGPGAAESVVARADDQFPLQR-ACSFLARANSRYRMAFPARVCAYPLAADPPRRPGHYLLVFHE 476
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S4I3L7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3L7_9STRA) HSP 1 Score: 159 bits (402), Expect = 8.800e-39 Identity = 88/202 (43.56%), Postives = 124/202 (61.39%), Query Frame = 2
Query: 749 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSAD-ARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQPV 1333
+ +D+L+ D LMC F R+ AV GA EC GML+ +FS ++K++ EM++D MGFMQQL+R+ G +VPN+LEMA P+ D ARVIT + PPF+I SVNE+W + + EVEG+ + + G RTD A +R K +V+ GR AC V+Y K R F++ + YPLT+ D +TH L V +E PV
Sbjct: 144 VNEDDMLLTEDVLMCPFVFRSQDAVQCGALAECVMPGMLRGQFSKRNKLLNVEMVYDAMGFMQQLERASGSEGAAQIVPNSLEMALSPNTDEARVITLAKPPFLIVSVNESWTRMTKYTQMEVEGKEMSILNGKRTDAQAGKRNSKPVHDFAEVSGGRCACSANVHYDKHGRDFVDFVCSYPLTNANDGITHILHVCKELPV 345
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S1VFG1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VFG1_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.470e-36 Identity = 86/199 (43.22%), Postives = 121/199 (60.80%), Query Frame = 2
Query: 749 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRA------LKDVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQE 1324
+ +D+L+ D LMC F R+ AV GA E GML+ FS ++K+V+ EM++D MGFMQQL+R+ G +VP +LEMA P+ +ARVIT + PPF+I SVNE+W + + EVEG+ L + G RT+ A R+ L++VA G+ AC T V+Y K R F++ YPLT+ D VTH L V +E
Sbjct: 176 VNEDDMLLTDDILMCPFVFRSQDAVLCGALAEVIMPGMLRAHFSARNKLVSLEMVYDAMGFMQQLERASGSEGTAQIVPGSLEMALSPNTNEARVITLAKPPFLIVSVNESWTRMSKYTQMEVEGKELAILNGERTNPDAAVRSGKPPHKLEEVAAGKCACSTNVHYDKNGREFVDFTCSYPLTNANDTVTHILHVSRE 374
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S4I3G7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3G7_9STRA) HSP 1 Score: 159 bits (402), Expect = 4.580e-36 Identity = 88/202 (43.56%), Postives = 124/202 (61.39%), Query Frame = 2
Query: 749 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSAD-ARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQPV 1333
+ +D+L+ D LMC F R+ AV GA EC GML+ +FS ++K++ EM++D MGFMQQL+R+ G +VPN+LEMA P+ D ARVIT + PPF+I SVNE+W + + EVEG+ + + G RTD A +R K +V+ GR AC V+Y K R F++ + YPLT+ D +TH L V +E PV
Sbjct: 741 VNEDDMLLTEDVLMCPFVFRSQDAVQCGALAECVMPGMLRGQFSKRNKLLNVEMVYDAMGFMQQLERASGSEGAAQIVPNSLEMALSPNTDEARVITLAKPPFLIVSVNESWTRMTKYTQMEVEGKEMSILNGKRTDAQAGKRNSKPVHDFAEVSGGRCACSANVHYDKHGRDFVDFVCSYPLTNANDGITHILHVCKELPV 942
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Match: A0A7S1Z127_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z127_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.460e-33 Identity = 80/201 (39.80%), Postives = 119/201 (59.20%), Query Frame = 2
Query: 749 ITSEDVLIMTDTLMCRFAVRTDGAVASGARCECAKRGMLQVKFSPKHKIVAAEMMFDVMGFMQQLQRSLGDGVPMPLVPNTLEMARQPSA-DARVITTSDPPFVIASVNEAWCDLCGFRPEEVEGRTLRDIQGPRTDLAALRRALK------DVALGRPACVTLVNYKKGDRPFINALRMYPLTSEIDYVTHYLGVLQEQP 1330
+ +D+L+ D LMC F R+ AV GA EC GML+ FS ++K+ + EM++D MGFMQQL+R+ ++PN+LEMA P+ +ARVIT + PP++I SVNEAW + EVEG+ + + G +TD A +R K +VA G AC ++Y K + F++ + YPLT+ D +TH L + +E P
Sbjct: 227 VNEDDMLLTDDVLMCPFIFRSQDAVLCGALAECIMPGMLRAHFSSRNKLCSLEMVYDSMGFMQQLERASCSEGTAQIIPNSLEMALSPNTNEARVITLAKPPYLIVSVNEAWARTTKYTQMEVEGKEMSVLHGKKTDPDAGKRPGKPSHEMMEVAKGNCACSVNIHYDKHGKEFVDFVCSYPLTNGNDEITHILHICKELP 427 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1816.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1816.2.1 >prot_P-wetherbeei_contig1816.2.1 ID=prot_P-wetherbeei_contig1816.2.1|Name=mRNA_P-wetherbeei_contig1816.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=695bp MADACSLSVMGDVLGSGTANWPRARRAGARTRLVCSITSEDVLIMTDTLMback to top mRNA from alignment at P-wetherbeei_contig1816:1784..5074+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1816.2.1 ID=mRNA_P-wetherbeei_contig1816.2.1|Name=mRNA_P-wetherbeei_contig1816.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3291bp|location=Sequence derived from alignment at P-wetherbeei_contig1816:1784..5074+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1816:1784..5074+ >mRNA_P-wetherbeei_contig1816.2.1 ID=mRNA_P-wetherbeei_contig1816.2.1|Name=mRNA_P-wetherbeei_contig1816.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2085bp|location=Sequence derived from alignment at P-wetherbeei_contig1816:1784..5074+ (Phaeothamnion wetherbeei SAG_119_79)back to top |