prot_P-wetherbeei_contig18150.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18150.1.1
Unique Nameprot_P-wetherbeei_contig18150.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length144
Homology
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: A0A7W5TGP2_9HYPH (2'-5' RNA ligase n=4 Tax=Rhizobium TaxID=379 RepID=A0A7W5TGP2_9HYPH)

HSP 1 Score: 80.9 bits (198), Expect = 2.410e-16
Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 0
Query:   31 PHMTMAQIEVDALDRAAGALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGPGHYLPGNWVPHVTLGR---LRDAG 130
            PH+++A  +    +    AL + + GM    +   S+GLFPG  PVLF  PV SA LLALHR  H A+   D+  AA   +YLPGNWVPHVTLG    L +AG
Sbjct:   41 PHISLAVYDGLDPEPLIKALDQFSDGMRSPVVRLSSLGLFPGSAPVLFAAPVVSAELLALHRDFHTAI---DSAGAACWSYYLPGNWVPHVTLGEQLTLEEAG 140          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: A0A6L7U490_9CHLR (2'-5' RNA ligase family protein n=3 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6L7U490_9CHLR)

HSP 1 Score: 77.4 bits (189), Expect = 7.630e-15
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 0
Query:    3 FDTASDTRIRRLWKAFEDR---ALIMPNVGRPHMTMAQIEVDALDRA-AGALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGPGHYLPGNWVPHVTL 123
            FD  SD  +R +W    D    + ++ N GRPH+++A    D   R+    L   +  +   ++   S+G FP E+ V+FL PV ++ LLA+H R   A    +   +A   HYLPGNWVPHVT+
Sbjct:   27 FDPDSDLAVREIWSGIADAFGLSTMLTNGGRPHVSLAVYSDDFDHRSFLQELPAFSKSLAPLKVQLGSVGTFPTEEGVIFLAPVVTSELLAVHERFRIAFSGFEGCASA---HYLPGNWVPHVTV 148          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: A0A6G2JP02_9BACT (2'-5' RNA ligase family protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6G2JP02_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 1.010e-14
Identity = 48/127 (37.80%), Postives = 67/127 (52.76%), Query Frame = 0
Query:    3 FDTASDTRIRRLWKAFEDRALIMPNVG----RPHMTMAQIEVDALDRAA--GALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGPGHYLPGNWVPHVTL 123
            +D ASD  +R +W      AL  P++     RPH+++A +  D  D       L E A  +        S+G FPG++ V+FL PV +  LLA+H R H+   K D     G G+YLPGNWVPH T+
Sbjct:    9 YDEASDRTVREIWDGL-GTALGQPSLSELGARPHVSLA-VYGDGYDTNGFPERLLEFARSIDPFDFTLSSLGTFPGQEGVVFLAPVVTRRLLAVHARFHEVFSKHDHV---GMGYYLPGNWVPHCTV 130          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: UPI00178A0663 (2'-5' RNA ligase family protein n=1 Tax=Rhizobium viscosum TaxID=1673 RepID=UPI00178A0663)

HSP 1 Score: 74.7 bits (182), Expect = 5.630e-14
Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 0
Query:   31 PHMTMAQIEVDALDRAAGALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGPGHYLPGNWVPHVTLGRLRDAGRLGEAMT 137
            PH+++A  +    +  A AL   ++ +    +   SIGLFPG   VLF  PV S  LLALHR  H A   A A +A  P HYLPGNWVPHVTLG        G A++
Sbjct:   41 PHISLAVYDGLDPEPIAKALDRFSADISTPSIKLSSIGLFPGPASVLFAAPVVSEELLALHRDFHAAA--ATAGVACWP-HYLPGNWVPHVTLGEQLSPEEAGAAIS 144          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: A0A0G3IQQ1_9MYCO (Uncharacterized protein n=1 Tax=Mycobacterium sp. EPa45 TaxID=1545728 RepID=A0A0G3IQQ1_9MYCO)

HSP 1 Score: 71.2 bits (173), Expect = 1.100e-12
Identity = 49/143 (34.27%), Postives = 72/143 (50.35%), Query Frame = 0
Query:    1 MTFDTASDTRIRRLWKAFEDRAL-----IMPNVGRPHMTMAQIE--VDALDRAAGALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGPGHYLPGNWVPHVTLGRLRDAGRLGEAM 136
            +  D  +DT +RRLW A  D  L     +  +  RPH+T+   E  V A+D + G LA    G+    +A  +  +F G +  L    VAS  LLA+H +++D      + L A   H +PG W PHVTLGR     ++ EA+
Sbjct:    7 LLLDDRADTAVRRLWHALADAGLPSQLRVSSDTNRPHITVIAAEQIVAAVDESLGELA----GLFPLDVALGAPVIFGGGRLTLARLVVASDKLLAVHEKIYDLCLPFVSNLFA---HTMPGQWTPHVTLGRRYTPAQIAEAL 142          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: J2AXT3_9HYPH (2'-5' RNA ligase n=4 Tax=Rhizobium TaxID=379 RepID=J2AXT3_9HYPH)

HSP 1 Score: 71.2 bits (173), Expect = 1.190e-12
Identity = 45/107 (42.06%), Postives = 55/107 (51.40%), Query Frame = 0
Query:   31 PHMTMAQIEVDALDRAAGALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGPGHYLPGNWVPHVTLGRLRDAGRLGEAMT 137
            PH+++A  +    +    AL   ++ M    +   SIGLFPG   VLF  PV S  LL LHR  H A   A A  A  P HYLP NWVPHVTLG        G A++
Sbjct:   41 PHISLAVYDGLDPEPLTNALDRFSANMSAPSVKLSSIGLFPGPASVLFAAPVVSEELLILHRDFHAAAASAGA--ACWP-HYLPENWVPHVTLGEQLSPEEAGAAIS 144          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: A0A858RQ06_9BACT (2'-5' RNA ligase family protein n=1 Tax=Luteolibacter luteus TaxID=2728835 RepID=A0A858RQ06_9BACT)

HSP 1 Score: 70.5 bits (171), Expect = 2.310e-12
Identity = 44/140 (31.43%), Postives = 66/140 (47.14%), Query Frame = 0
Query:    4 DTASDTRIRRLWKAFEDRAL--IMPNVGRPHMTMAQIEVDALDRAAGALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGPGHYLPGNWVPHVTLGRLRDAGRLGEAMTIANE 141
            D A++ R+RR+W+      +  +  +  RPH+++A  +    D     L   A    G  + F SIG+FP EQPVLFL P  +  LL LH    D+       +     +Y P  W+PH TL        + EA++I  E
Sbjct:   10 DPATEQRVRRIWERLAGIGISYLHGSGSRPHVSLAVCDSIDTDATIELLNRFAEDTSGFPITFSSIGIFPAEQPVLFLAPKVTIPLLELHASFMDSFEPMATRIWP---NYAPSEWIPHCTLAVACPHECVEEALSICRE 146          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: UPI00141E2DED (2'-5' RNA ligase family protein n=1 Tax=Mycobacterium sp. DL592 TaxID=2675524 RepID=UPI00141E2DED)

HSP 1 Score: 69.7 bits (169), Expect = 4.280e-12
Identity = 58/145 (40.00%), Postives = 73/145 (50.34%), Query Frame = 0
Query:    1 MTFDTASDTRIRRLWKAFEDRAL-----IMPNVGRPHMTM--AQIEVDALDRAAGALAE--VASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGP-GHYLPGNWVPHVTLGRLRDAGRLGEA 135
            +T D  SD  IR+LW+A +D  L     +     RPH+T+  AQ     +D A  ALA+      + G  L F       G + VL    VASA LL LHR V+D   +    LA  P GH  PG W PHVTLGR   A +LG+A
Sbjct:    7 LTLDAHSDAAIRQLWQALDDAGLPSQTRVTSATNRPHITLLAAQRISPDVDAAWTALAQRIPLPVLVGAPLVFG------GGRLVLARLIVASAALLELHREVYD---RCLPHLAGEPYGHTAPGQWTPHVTLGRRLTAEQLGDA 142          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: A0A563EUG6_9PSEU (2'-5' RNA ligase family protein n=2 Tax=Lentzea tibetensis TaxID=2591470 RepID=A0A563EUG6_9PSEU)

HSP 1 Score: 62.0 bits (149), Expect = 3.440e-9
Identity = 43/121 (35.54%), Postives = 62/121 (51.24%), Query Frame = 0
Query:    3 FDTASDTRIRRLWKAFEDRALIMPNVGRPHMTMAQIEVDALDRAAGALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGPGHYLPGNWVPHVTL 123
            FD  +D ++R LW+      L + +   PH+T A +      +A   L E  S +    L   ++G+F   + VL L+ V  A LLA+H  +HD L       +A   +YLPGNWVPHVTL
Sbjct:    9 FDDEADAKVRGLWQQ-----LGVKHEYPPHLTYA-VAGTIGPKARAELREDLSRLWVPDLWLHTLGVFSATENVLHLSAVVDAELLAVHSAIHDVLAGKVRNPSA---YYLPGNWVPHVTL 120          
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Match: A0A0D1J4A2_9MYCO (Uncharacterized protein n=1 Tax=Mycolicibacterium llatzerense TaxID=280871 RepID=A0A0D1J4A2_9MYCO)

HSP 1 Score: 61.2 bits (147), Expect = 6.380e-9
Identity = 48/141 (34.04%), Postives = 63/141 (44.68%), Query Frame = 0
Query:    1 MTFDTASDTRIRRLWKAFEDRALIMPN-VGRPHMTMAQIEVDALDRAAGALAEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRKADATLAAGP-GHYLPGNWVPHVTLGRLRDAGRLGEAMTIA 139
            + FD  ++  IRR W       +       RPH+T+  +  D +D A                   S  +F     VL  + V SAGLL +H    DA R A   L + P  H  PG+W PHVTLGR   A RLG A++IA
Sbjct:    7 LLFDLDTEAVIRRAWDDLRAAGIAAQRPTARPHVTL--VVADGMDHAVAQSLSTLLPRFPLPCRVGSALVFGRSAAVLARSIVPSAGLLEIHA---DACRLAADHLTSAPMPHTQPGDWSPHVTLGRRIPADRLGAALSIA 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18150.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W5TGP2_9HYPH2.410e-1646.602'-5' RNA ligase n=4 Tax=Rhizobium TaxID=379 RepID... [more]
A0A6L7U490_9CHLR7.630e-1536.002'-5' RNA ligase family protein n=3 Tax=unclassifi... [more]
A0A6G2JP02_9BACT1.010e-1437.802'-5' RNA ligase family protein n=1 Tax=Gemmatimon... [more]
UPI00178A06635.630e-1443.932'-5' RNA ligase family protein n=1 Tax=Rhizobium ... [more]
A0A0G3IQQ1_9MYCO1.100e-1234.27Uncharacterized protein n=1 Tax=Mycobacterium sp. ... [more]
J2AXT3_9HYPH1.190e-1242.062'-5' RNA ligase n=4 Tax=Rhizobium TaxID=379 RepID... [more]
A0A858RQ06_9BACT2.310e-1231.432'-5' RNA ligase family protein n=1 Tax=Luteolibac... [more]
UPI00141E2DED4.280e-1240.002'-5' RNA ligase family protein n=1 Tax=Mycobacter... [more]
A0A563EUG6_9PSEU3.440e-935.542'-5' RNA ligase family protein n=2 Tax=Lentzea ti... [more]
A0A0D1J4A2_9MYCO6.380e-934.04Uncharacterized protein n=1 Tax=Mycolicibacterium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF135632_5_RNA_ligase2coord: 28..129
e-value: 1.3E-11
score: 44.7
NoneNo IPR availableGENE3D3.90.1140.10Cyclic phosphodiesterasecoord: 2..144
e-value: 4.3E-18
score: 67.6
NoneNo IPR availablePANTHERPTHR36039FAMILY NOT NAMEDcoord: 2..143
IPR009097Cyclic phosphodiesteraseSUPERFAMILY55144LigT-likecoord: 9..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18150contigP-wetherbeei_contig18150:124..555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18150.1.1mRNA_P-wetherbeei_contig18150.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18150 115..555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18150.1.1 ID=prot_P-wetherbeei_contig18150.1.1|Name=mRNA_P-wetherbeei_contig18150.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MTFDTASDTRIRRLWKAFEDRALIMPNVGRPHMTMAQIEVDALDRAAGAL
AEVASGMHGTRLAFDSIGLFPGEQPVLFLNPVASAGLLALHRRVHDALRK
ADATLAAGPGHYLPGNWVPHVTLGRLRDAGRLGEAMTIANEFRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009097Cyclic_Pdiesterase