prot_P-wetherbeei_contig18087.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig18087.1.1
Unique Nameprot_P-wetherbeei_contig18087.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length71
Homology
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A521YWC9_9PROT (30S ribosomal protein S18 n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521YWC9_9PROT)

HSP 1 Score: 133 bits (334), Expect = 4.520e-39
Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            FRRRKFCRFTAEK EW+DYK+VDVLKDFVNE GKIIPARITGT AG+QRQLS AIKRARFLALLPYTDLH
Sbjct:   28 FRRRKFCRFTAEKVEWIDYKDVDVLKDFVNETGKIIPARITGTAAGYQRQLSDAIKRARFLALLPYTDLH 97          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A1F3YQU8_9PROT (30S ribosomal protein S18 n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YQU8_9PROT)

HSP 1 Score: 132 bits (333), Expect = 6.230e-39
Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            FRRRKFCRFTAEK EWVDYK +D+LKDF+NENG+IIPARITGT+AG+QRQLS AIKRARFLAL+PYTDLH
Sbjct:   27 FRRRKFCRFTAEKIEWVDYKAIDILKDFINENGRIIPARITGTSAGYQRQLSTAIKRARFLALMPYTDLH 96          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A537BVP2_9PROT (30S ribosomal protein S18 n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BVP2_9PROT)

HSP 1 Score: 131 bits (330), Expect = 8.640e-39
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            FRRRKFCRFTAEK EW+DYK+V+VLKDF+NE GKIIPARITGT AG+QRQLS AIKRARFLALLPYTDLH
Sbjct:    2 FRRRKFCRFTAEKVEWIDYKDVEVLKDFINETGKIIPARITGTAAGYQRQLSEAIKRARFLALLPYTDLH 71          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A149VVK6_9PROT (30S ribosomal protein S18 n=3 Tax=unclassified Ferrovum TaxID=2609466 RepID=A0A149VVK6_9PROT)

HSP 1 Score: 131 bits (329), Expect = 2.130e-38
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            FRRRKFCRFTAEK EWVDYK+VD+LKDF+NENGKIIPARITGT A +QRQL VA+KRARFLALLPYTDLH
Sbjct:   21 FRRRKFCRFTAEKIEWVDYKDVDLLKDFINENGKIIPARITGTKARYQRQLGVAVKRARFLALLPYTDLH 90          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: UPI0019A27299 (30S ribosomal protein S18 n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019A27299)

HSP 1 Score: 131 bits (329), Expect = 2.540e-38
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            FRRRKFCRFTAEK EWVDYK +D+LKDF+NENG+IIPARITGT+AG+QRQLS AIKRARFLAL+P+TDLH
Sbjct:   27 FRRRKFCRFTAEKIEWVDYKAIDILKDFINENGRIIPARITGTSAGYQRQLSTAIKRARFLALMPFTDLH 96          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A1F4F2F6_9PROT (30S ribosomal protein S18 n=5 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F2F6_9PROT)

HSP 1 Score: 130 bits (328), Expect = 3.950e-38
Identity = 59/70 (84.29%), Postives = 68/70 (97.14%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            FRRRKFCRFTAEKAEW+DYK+++VLKDF+NE GKIIPARITGT++G+QRQLS AIKRARFLAL+PYTDLH
Sbjct:   30 FRRRKFCRFTAEKAEWIDYKDIEVLKDFINETGKIIPARITGTSSGYQRQLSEAIKRARFLALVPYTDLH 99          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A0S8AYD1_9PROT (30S ribosomal protein S18 n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8AYD1_9PROT)

HSP 1 Score: 130 bits (327), Expect = 5.130e-38
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            FRRRKFCRFTAEK EW+DYK++D L+DF+NE GKIIPARITGT+AG+QRQLS AIKRARFLALLPYTDLH
Sbjct:   27 FRRRKFCRFTAEKVEWIDYKDLDTLRDFINETGKIIPARITGTSAGYQRQLSTAIKRARFLALLPYTDLH 96          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A1F4C7V3_9PROT (30S ribosomal protein S18 n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4C7V3_9PROT)

HSP 1 Score: 130 bits (327), Expect = 5.440e-38
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            F+RRKFCRFTAEK EWVDYK++++LKDFVNENG+IIPARITGT AG+QRQLS AIKRAR+LALLPYTDLH
Sbjct:   29 FKRRKFCRFTAEKIEWVDYKDIEILKDFVNENGRIIPARITGTKAGYQRQLSTAIKRARYLALLPYTDLH 98          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A1F4AYY1_9PROT (30S ribosomal protein S18 n=6 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4AYY1_9PROT)

HSP 1 Score: 129 bits (324), Expect = 1.810e-37
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            F+RRKFCRFT EK EW+DYK+VD+LKDF+NENGKIIPARITGT  G+QRQLS AIKRARFLALLPYTDLH
Sbjct:   34 FKRRKFCRFTVEKIEWIDYKDVDLLKDFINENGKIIPARITGTKTGYQRQLSEAIKRARFLALLPYTDLH 103          
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Match: A0A6L9KXK7_9PROT (30S ribosomal protein S18 n=1 Tax=Ferrovum sp. TaxID=2609467 RepID=A0A6L9KXK7_9PROT)

HSP 1 Score: 129 bits (323), Expect = 1.850e-37
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    1 FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQLSVAIKRARFLALLPYTDLH 70
            FRRRKFCRFT EK EWVDYK+VD+LKDF+NENGKIIPARITGT A +QRQLS A+KRARFLALLPYTDLH
Sbjct:   23 FRRRKFCRFTVEKIEWVDYKDVDLLKDFINENGKIIPARITGTKAIYQRQLSTAVKRARFLALLPYTDLH 92          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig18087.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521YWC9_9PROT4.520e-3990.0030S ribosomal protein S18 n=5 Tax=unclassified Bet... [more]
A0A1F3YQU8_9PROT6.230e-3985.7130S ribosomal protein S18 n=5 Tax=unclassified Bet... [more]
A0A537BVP2_9PROT8.640e-3987.1430S ribosomal protein S18 n=1 Tax=Betaproteobacter... [more]
A0A149VVK6_9PROT2.130e-3887.1430S ribosomal protein S18 n=3 Tax=unclassified Fer... [more]
UPI0019A272992.540e-3884.2930S ribosomal protein S18 n=1 Tax=Candidatus Parcu... [more]
A0A1F4F2F6_9PROT3.950e-3884.2930S ribosomal protein S18 n=5 Tax=unclassified Bet... [more]
A0A0S8AYD1_9PROT5.130e-3884.2930S ribosomal protein S18 n=1 Tax=Betaproteobacter... [more]
A0A1F4C7V3_9PROT5.440e-3884.2930S ribosomal protein S18 n=2 Tax=unclassified Bet... [more]
A0A1F4AYY1_9PROT1.810e-3784.2930S ribosomal protein S18 n=6 Tax=unclassified Bet... [more]
A0A6L9KXK7_9PROT1.850e-3785.7130S ribosomal protein S18 n=1 Tax=Ferrovum sp. Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001648Ribosomal protein S18PRINTSPR00974RIBOSOMALS18coord: 34..41
score: 61.36
coord: 42..56
score: 45.86
coord: 24..34
score: 42.98
coord: 56..66
score: 69.97
IPR001648Ribosomal protein S18TIGRFAMTIGR00165TIGR00165coord: 1..68
e-value: 2.4E-31
score: 105.8
IPR001648Ribosomal protein S18PFAMPF01084Ribosomal_S18coord: 14..64
e-value: 4.7E-23
score: 81.1
IPR001648Ribosomal protein S18PANTHERPTHR1347930S RIBOSOMAL PROTEIN S18coord: 4..67
IPR001648Ribosomal protein S18HAMAPMF_00270Ribosomal_S18coord: 3..69
score: 18.90527
IPR036870Ribosomal protein S18 superfamilyGENE3D4.10.640.10Ribosomal protein S18coord: 1..69
e-value: 6.0E-25
score: 89.1
IPR036870Ribosomal protein S18 superfamilySUPERFAMILY46911Ribosomal protein S18coord: 2..67
NoneNo IPR availablePANTHERPTHR13479:SF4028S RIBOSOMAL PROTEIN S18C, MITOCHONDRIALcoord: 4..67
IPR018275Ribosomal protein S18, conserved sitePROSITEPS00057RIBOSOMAL_S18coord: 17..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig18087contigP-wetherbeei_contig18087:1..213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig18087.1.1mRNA_P-wetherbeei_contig18087.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig18087 1..213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig18087.1.1 ID=prot_P-wetherbeei_contig18087.1.1|Name=mRNA_P-wetherbeei_contig18087.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp
FRRRKFCRFTAEKAEWVDYKEVDVLKDFVNENGKIIPARITGTTAGFQRQ
LSVAIKRARFLALLPYTDLH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001648Ribosomal_S18
IPR036870Ribosomal_S18_sf
IPR018275Ribosomal_S18_CS