prot_P-wetherbeei_contig1804.1.3 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1804.1.3
Unique Nameprot_P-wetherbeei_contig1804.1.3
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length192
Homology
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.800e-37
Identity = 80/190 (42.11%), Postives = 102/190 (53.68%), Query Frame = 0
Query:    2 VCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASAAAVTEEAVELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTVLDVRLHNDDINSFDKVITTL 191
            VCGY FKRGD+ WNCR CQ+D TCVQCD CFR +DH GHEV+FH+ +            GCCDCGD+EAWD  GCC  H  +D   DP+ +LP ++R  A  V  EAV L    V  A L         H    +   P  P +A+ +AG     + GE             +RLHNDD+++F+ V   L
Sbjct:  130 VCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPG----------GCCDCGDLEAWDRAGCCTAHSGSDPCQDPVDSLPASMRLPARVVFAEAVAL----VTDACLQAVQGYNSSHTHGFLVPGPVPP-VADEDAGLRNHPRSGEDRGH-------CILRLHNDDVHTFNHVTDAL 297          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: K8YNA8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNA8_NANGC)

HSP 1 Score: 135 bits (340), Expect = 9.890e-37
Identity = 60/111 (54.05%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    2 VCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASAAAVTEEAVELL 112
            VCGY FKRGD+ WNCR CQ+D TCVQCD CFR +DH GHEV+FH+ +            GCCDCGD+EAWD  GCC  H  +D   DP+ +LP ++R  A  V  EAV L+
Sbjct:   72 VCGYTFKRGDLCWNCRSCQTDPTCVQCDPCFRASDHAGHEVYFHQASPG----------GCCDCGDLEAWDRAGCCTAHSGSDPFQDPVDSLPTSMRLPARVVLAEAVALV 172          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 7.960e-35
Identity = 70/118 (59.32%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDV------DPMAALPVALRASAAAVTEEAVELL 112
            RVCGYVFKRGDIAWNCR CQ D TCVQCDACFRR+DHTGH V+FHRTA            GCCDCGD EAW   GCC RH P   D       DP+AALP   +A A  V    V  L
Sbjct:   89 RVCGYVFKRGDIAWNCRKCQVDSTCVQCDACFRRSDHTGHPVYFHRTAPG----------GCCDCGDEEAWAEEGCCSRHRPRRGDQGGGGAGDPLAALPTDFQAVARIVVRGVVLFL 196          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A067CAK3_SAPPC (E3 ubiquitin-protein ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAK3_SAPPC)

HSP 1 Score: 139 bits (349), Expect = 1.580e-34
Identity = 70/192 (36.46%), Postives = 100/192 (52.08%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASAAAVTEEAVELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTVLDVRLHNDDINSFDKVITTLR 192
            +VCGY+FK  ++A++CRDCQ D TCV C ACF  ++H GH+V F RT+            GCCDCGD EAW   G C +H   D  +     LP  ++  AA +    V+ +  V++ A     +    R LC+++P      W    +A  A   K     R+ A P T  DVRLH+DD++ F  V+  +R
Sbjct:   91 KVCGYIFKADEMAYSCRDCQHDSTCVMCQACFADSNHDGHDVSFQRTSAG----------GCCDCGDTEAWAKDGFCHKHPGRDASISKPLVLPKGMQEVAAPLINTVVQYVHDVLVMAEDSVEITTVMRELCAMVPPPDRISWKDSDDAREAANTKT-RAEREAAPPATEYDVRLHSDDVHPFQDVVKAIR 271          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S1TVV5_9STRA (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVV5_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.760e-34
Identity = 81/204 (39.71%), Postives = 109/204 (53.43%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDV--DPMAALPVALRASAAAVTEEA----VELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTVLD------VRLHNDDINSFDKVITTLR 192
            R CGYVF+ GDI WNCR C++D TCVQCDACF+ +DH GHEV FH+   AS N       GCCDCGD EAW   GCCP H   + +   DP++AL  A  A+A AV E A    V+ +   V+   +  P  +G R   + +  + +N           GG+ G    R    P  + +      V +HNDD +++D + T LR
Sbjct:   96 RYCGYVFQEGDICWNCRTCEADATCVQCDACFQASDHEGHEVFFHK---ASPN-------GCCDCGDEEAWALAGCCPLHRRNENETLRDPVSALDAAFAAAARAVLEAARDVLVDCVTDAVLCYEMSMPPPQGGRSRSNSVSSVGSN---------GEGGDAGEVDPRLATNPHMLAENDGRVHVFIHNDDWHTYDDITTLLR 280          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S4V6U6_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V6U6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.020e-34
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGP 82
            R CGYVF+RGDIAWNCR CQ+D TCV CD CF  +DH GHEV FHRT+            GCCDCGD+EAW   GCCPRH P
Sbjct:   44 RPCGYVFRRGDIAWNCRTCQTDSTCVLCDRCFHESDHEGHEVFFHRTSPG----------GCCDCGDIEAWKIEGCCPRHRP 115          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S3ZP19_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP19_9STRA)

HSP 1 Score: 137 bits (346), Expect = 4.040e-34
Identity = 85/197 (43.15%), Postives = 104/197 (52.79%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADV-DVDPMAALPVALRASAAAVTEEAVELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTV-----LDVRLHNDDINSFDKVITTL 191
            R CG+VF  GDIAWNCR CQ D TCV CDACFR ++H GHEV FHR A            GCCDCGD EAW A GCC +H  + V + DP+A+LP  LR +   V  EA    R VV  A     +R    H         +NP  +  E      E+ G   R  AA  +      + VRLH+DD++S+D VI  L
Sbjct:  109 RACGHVFAAGDIAWNCRTCQKDNTCVLCDACFRSSNHQGHEVFFHRAAPG----------GCCDCGDPEAWVAEGCCAKHRASSVVEEDPLASLPPGLRQAGEVVVREAA---RYVVGAA-----VRAAGAH-----EPFNSNPAFSTTEPN----EETGLLDRLSAAAQSRDEDQGVRVRLHDDDVHSYDDVIGAL 278          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S2LKQ2_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LKQ2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 6.080e-34
Identity = 58/101 (57.43%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASA 101
            R CGYVFKRGD+AWNCR CQ+D TCV CDACF+ +DHTGHEV FH+T+            GCCDCGDVEAW A+GCC  H P    V P+   P+ + A+A
Sbjct:   35 RPCGYVFKRGDMAWNCRTCQTDSTCVLCDACFQASDHTGHEVSFHQTSPG----------GCCDCGDVEAWAAKGCCDLHRP----VLPVLIPPICVEATA 121          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.030e-33
Identity = 86/230 (37.39%), Postives = 104/230 (45.22%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRDCQSDGTCVQ-------------------------------------CDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRASAAAVTEEAVELLRLVV--ITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEAGSAGGEKGGEGSRQPAAPPTVLDVRLHNDDINSFDKVITTL 191
            R+CGYVFKRGDIAWNC  CQ D T VQ                                     CD+CFR++ H GH+V FHRT             GCCDCGD EAW   GCCP H  A   VDP+A+LP  L   A A     ++    VV       +G  R               N WL   ++ +A  E  GEG+   A    VL VRLHNDD+++FD VI+ L
Sbjct:   86 RICGYVFKRGDIAWNCLTCQCDPTAVQETTTREVAGALCICVALIHAIINPNHFPSFPAVQLQQCDSCFRQSSHVGHKVFFHRTNAG----------GCCDCGDEEAWATDGCCPTHSAAAATVDPLASLPPLLLTGARATVRAILDFATTVVWDCVHSFEGAER---------------NRWLKPSKSAAAAVEGEGEGA---AGGAPVLVVRLHNDDVHTFDHVISVL 287          
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Match: A0A7S4EF35_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EF35_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.050e-33
Identity = 53/82 (64.63%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    1 RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQASNNTIQSKFLGCCDCGDVEAWDARGCCPRHGP 82
            R CGYVFKRGDIAWNCR CQ+D TCV CD CFR +DH GHEV+FHRT             GCCDCGD EAW   GCCP H P
Sbjct:   27 RPCGYVFKRGDIAWNCRTCQTDSTCVICDTCFRSSDHEGHEVYFHRTTPG----------GCCDCGDAEAWKPEGCCPAHRP 98          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1804.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D1X7_9STRA1.800e-3742.11E3 ubiquitin-protein ligase n=6 Tax=Monodopsidacea... [more]
K8YNA8_NANGC9.890e-3754.05E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
D7G3D3_ECTSI7.960e-3559.32E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A067CAK3_SAPPC1.580e-3436.46E3 ubiquitin-protein ligase n=2 Tax=Saprolegnia Ta... [more]
A0A7S1TVV5_9STRA2.760e-3439.71E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Pha... [more]
A0A7S4V6U6_9STRA4.020e-3463.41E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dit... [more]
A0A7S3ZP19_9STRA4.040e-3443.15E3 ubiquitin-protein ligase n=2 Tax=Pelagomonas ca... [more]
A0A7S2LKQ2_9STRA6.080e-3457.43E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Lep... [more]
A0A836CB31_9STRA1.030e-3337.39E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A7S4EF35_9STRA1.050e-3364.63E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pse... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003126Zinc finger, UBR-typeSMARTSM00396push_1coord: 1..81
e-value: 1.1E-9
score: 48.2
IPR003126Zinc finger, UBR-typePFAMPF02207zf-UBRcoord: 2..80
e-value: 3.6E-13
score: 49.4
IPR003126Zinc finger, UBR-typePROSITEPS51157ZF_UBRcoord: 1..82
score: 9.638949
NoneNo IPR availableGENE3D2.10.110.30coord: 3..81
e-value: 3.7E-18
score: 67.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..170
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 1..112
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1804contigP-wetherbeei_contig1804:883..1865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1804.1.3mRNA_P-wetherbeei_contig1804.1.3Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1804 883..1865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1804.1.3 ID=prot_P-wetherbeei_contig1804.1.3|Name=mRNA_P-wetherbeei_contig1804.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp
RVCGYVFKRGDIAWNCRDCQSDGTCVQCDACFRRADHTGHEVHFHRTAQA
SNNTIQSKFLGCCDCGDVEAWDARGCCPRHGPADVDVDPMAALPVALRAS
AAAVTEEAVELLRLVVITAPLDGPLRKGKRHLCSVIPQIPTNPWLAEVEA
GSAGGEKGGEGSRQPAAPPTVLDVRLHNDDINSFDKVITTLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003126Znf_UBR
IPR039164UBR1-like