prot_P-wetherbeei_contig17935.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17935.1.1
Unique Nameprot_P-wetherbeei_contig17935.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length67
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig17935.1.1 vs. uniprot
Match: A0A835YUV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.590e-8
Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 0 
Query:    1 LASQAHEQHAAFQYLCGDTDGAIATFRAAAELDPRNARARVKLAAVLADLDRKDDALAEFDAAL 64
            LA+ AHEQ A++ YL GD   A A FR AA LD R+ARARVKLA++L D+D +  AL  F  AL
Sbjct:  747 LAAAAHEQLASYLYLAGDMAAAEAGFRRAAALDARSARARVKLASLLCDMDDRAGALEWFRLAL 810
[Close]
BLAST of mRNA_P-wetherbeei_contig17935.1.1 vs. uniprot
Match: A0A521H1F0_9BACT (Tetratricopeptide repeat protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521H1F0_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 5.530e-5
Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 0 
Query:    1 LASQAHEQHAAFQYLCGDTDGAIATFRAAAELDPRNARARVKLAAVLADLDRKDDALAEFDAALTLA 67
            L +Q H +        G+  GA+A FRA AELDP+N  AR+++A  LA    +++ALAEF+AA  LA
Sbjct:  147 LLTQIHGKRGEALLASGNRAGAVAAFRAVAELDPQNFHARLEVATQLARHGLQEEALAEFEAAEDLA 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17935.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YUV6_9STRA1.590e-856.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A521H1F0_9BACT5.530e-544.78Tetratricopeptide repeat protein n=1 Tax=Planctomy... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13414TPR_11coord: 14..49
e-value: 5.4E-7
score: 29.2
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 37..67
score: 8.553177
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..67
e-value: 1.4E-10
score: 43.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17935contigP-wetherbeei_contig17935:435..635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17935.1.1mRNA_P-wetherbeei_contig17935.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17935 435..635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17935.1.1 ID=prot_P-wetherbeei_contig17935.1.1|Name=mRNA_P-wetherbeei_contig17935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=67bp
LASQAHEQHAAFQYLCGDTDGAIATFRAAAELDPRNARARVKLAAVLADL
DRKDDALAEFDAALTLA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf