prot_P-wetherbeei_contig17766.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17766.1.1
Unique Nameprot_P-wetherbeei_contig17766.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length261
Homology
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: S0EUX0_CHTCT (RND family efflux transporter, MFP subunit n=3 Tax=Chthonomonas TaxID=1077265 RepID=S0EUX0_CHTCT)

HSP 1 Score: 162 bits (411), Expect = 6.740e-43
Identity = 91/201 (45.27%), Postives = 129/201 (64.18%), Query Frame = 0
Query:   54 LQGYERVVAPFDGIITGRFVDEGALIK-ADTAANLTTSSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEIA-GVTAQDRCVDNPPEGIREG 252
            L+G+E+VVAPFDG+IT R VD G+LI    T A L+ +S+   +T +FGIAR + +RV + VPQ+    +R G   +I VRELP   F GK+   S ALD  TRT  VE+ IPNP G L+PGMYA   ++       L++P+TA+I D++G RVAV+    ++H+Q V +G DYG  +EI+ G+   DR + NP + + EG
Sbjct:  347 LRGFEKVVAPFDGVITSRNVDVGSLITPGTTTATLSANSSPMPTTGMFGIARTDVVRVQVNVPQAYIDAVRPGSLATIQVRELPGHVFVGKVVSSSHALDTDTRTFLVEIHIPNPQGLLVPGMYAEVTIKPAKQVYRLQVPATALIYDSKGMRVAVLTPDSRVHFQPVQIGRDYGKEVEISSGLAPNDRILLNPSDTLVEG 547          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: UPI0009F9C87C (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Herminiimonas arsenitoxidans TaxID=1809410 RepID=UPI0009F9C87C)

HSP 1 Score: 158 bits (400), Expect = 2.330e-42
Identity = 89/202 (44.06%), Postives = 125/202 (61.88%), Query Frame = 0
Query:   56 GYERVVAPFDGIITGRFVDEGALIKADTAANLTTSSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLE-NVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEIA-GVTAQDRCVDNPPEGIREGDVV 255
            GY RV+APFDGI+T R +D G LI A   A +           LF +A+ + +RV + VPQ  STQI+ G+ + I + E+P + F G IAR +GA+D  TRT QV V +PNP G L+PG Y    ++ N   TGAL +PS A++   +G+RVA+V  G K+H Q V +G + G  +E+A GV AQD+ + NP + + EGD V
Sbjct:  205 GYSRVIAPFDGIVTRRNIDIGTLIDAGGGARV-----------LFTMAKSDPLRVHIYVPQGYSTQIKTGDKVGITLTEIPGKVFEGSIARTAGAIDTLTRTLQVVVDLPNPNGELLPGAYVQVAVKANGSGTGALTIPSNALLFRPEGTRVAIVNDG-KVHLQPVVIGRELGVDVELASGVKAQDKLIINPSDSLSEGDAV 394          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: A0A8J3B237_9BURK (Secretion protein HlyD n=1 Tax=Oxalicibacterium solurbis TaxID=69280 RepID=A0A8J3B237_9BURK)

HSP 1 Score: 158 bits (400), Expect = 2.890e-42
Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 0
Query:   56 GYERVVAPFDGIITGRFVDEGALIKADTAANLTTSSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTG--ALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEI-AGVTAQDRCVDNPPEGIREGDVV 255
            G+ R+VAPF G+IT R VD G L+ A              S  LF +A+ + +RV + VPQS + QI+ G    + +RELP + F G IAR +GA+DP TRT Q+E+R+PNP G L+PG YA   ++   +T   AL +PS  ++   +G RVA+V    K+H Q VT+  + GT++E+ +GVT QDR + NP + + EGDVV
Sbjct:  205 GFSRIVAPFSGVITRRNVDIGNLVDAGGG-----------SLVLFTMAKSDTLRVYVYVPQSYAPQIKTGNKAEVTLRELPGRSFTGTIARTAGAIDPLTRTMQIEIRLPNPDGVLLPGAYAQVAIKATGATSQTALTVPSNTLLFRPEGIRVAIVGADGKVHLQPVTISRELGTTVELGSGVTTQDRLIVNPADSLNEGDVV 396          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: A0A402CRZ3_9BACT (RND family efflux transporter periplasmic adaptor subunit n=1 Tax=Capsulimonas corticalis TaxID=2219043 RepID=A0A402CRZ3_9BACT)

HSP 1 Score: 159 bits (401), Expect = 1.570e-41
Identity = 88/205 (42.93%), Postives = 129/205 (62.93%), Query Frame = 0
Query:   52 SALQGYERVVAPFDGIITGRFVDEGALIKADTAANLTTSSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEI-AGVTAQDRCVDNPPEGIREGDVV 255
            + L  ++RVVAPFDG+IT R VD G+L+   T  N+T SS + TS  LFGIAR + +R+ + +PQ+    I+ G    + ++ELPN  F G + + SGAL+  +RT   EVR+PNP G L+PGMYA  +L        LR P+  + +DAQG RVAVV    ++H++ VTLG D+G  +EI +G+   DR + NP + +++G  V
Sbjct:  341 AVLSSFKRVVAPFDGVITARNVDIGSLVTPGT--NITGSSTTPTS-GLFGIARTDTLRIFVNLPQTYYQSIKPGSKAKVFIQELPNTPFEGTVQQSSGALNSGSRTLLTEVRLPNPGGVLLPGMYAQVQLPTGSGNATLRAPADVLKVDAQGVRVAVVDSQMRVHFRNVTLGRDFGAEVEIVSGIGPADRLIANPSDDLKDGGKV 542          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: A0A2S9X1F1_9NEIS (HlyD_D23 domain-containing protein n=5 Tax=Chromobacterium TaxID=535 RepID=A0A2S9X1F1_9NEIS)

HSP 1 Score: 154 bits (389), Expect = 5.180e-41
Identity = 87/208 (41.83%), Postives = 122/208 (58.65%), Query Frame = 0
Query:   54 LQGYERVVAPFDGIITGRFVDEGALIKADTAANLTTSSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEI-AGVTAQDRCVDNPPEGIREGDVVETKSP 260
            LQ + RV APFDGI+T R +D G+L+ A                ALF +A+++ + +   VPQ+++  IR G+ + IA +E P Q   GK+AR +GA+DP TRT QVEV + N    L+PG Y  A    +P   AL LP+  +  +A+GSRVAVV    K+H Q V LGTDYG  +EI AG+   D+ + NPP+ I +G  V   +P
Sbjct:  185 LQDFARVAAPFDGIVTRRNIDTGSLVNAGNGG---------VPQALFAVAQIDKLHLYAYVPQANAAAIRVGQTVDIARQEAPGQPIKGKVARTAGAIDPATRTLQVEVMVANADHGLLPGQYVDATFR-LPKGDALTLPANTLQFNAKGSRVAVVGPDNKVHLQPVALGTDYGHEVEIRAGLKPDDKVIINPPDSINDGQPVTIAAP 382          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: UPI001CCC8F0A (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Kovacikia minuta TaxID=2931930 RepID=UPI001CCC8F0A)

HSP 1 Score: 154 bits (388), Expect = 2.350e-40
Identity = 84/208 (40.38%), Postives = 130/208 (62.50%), Query Frame = 0
Query:   53 ALQGYERVVAPFDGIITGRFVDEGALIKADTAANLTTSSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEI-AGVTAQDRCVDNPPEGIREGDVVETKS 259
            A Q Y+RV APF+G+IT R +D GALI        T  S  S +  L+ +A+   +R+ + +PQ+  + IR G+P  I+VRELP + F GK+ R + ALD  + T + EV++ NP  +L+PGMYA  +     S  AL +P+ A+++ + GS+VA+V   QK+H+Q VT+G DYG+ +EI +G+   ++ V NP + + EG  V+T S
Sbjct:  241 ATQSYKRVTAPFNGVITARNIDTGALI--------TAGSGGSNAVWLYKVAQPNTLRIFVDLPQTYVSSIRPGQPAEISVRELPKRAFIGKVTRTASALDTVSHTLRTEVQVNNPDLKLLPGMYAQVKFMLNQSAPALMVPANAIVVRSDGSQVAIVGADQKVHYQKVTIGRDYGSEVEIVSGLQGNEQLVVNPTDDVVEGVKVQTVS 440          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: A0A1Q7QH32_9ACTN (Uncharacterized protein n=1 Tax=Actinobacteria bacterium 13_1_40CM_2_65_8 TaxID=1803484 RepID=A0A1Q7QH32_9ACTN)

HSP 1 Score: 151 bits (381), Expect = 1.090e-39
Identity = 89/206 (43.20%), Postives = 127/206 (61.65%), Query Frame = 0
Query:   54 LQGYERVVAPFDGIITGRFVDEGALIKADTAANLTT---SSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEIA-GVTAQDRCVDNPPEGIREGDVV 255
            L  ++RV+APF+G +  R VD GALI A +  N T    SS +  +T LF IA+++A+RV + VPQ+    +  G P+ + VR    Q   G + R + ALDP TRT   +V IPN + RL+PGM+     +  PS    R+PSTAVI +AQG+RVA+V +G K+H+Q VTLG D+GT+I+I  G+   +  V  P   ++EG VV
Sbjct:  187 LVSFQRVLAPFNGTVIQRNVDVGALITAGSPINNTAVAPSSVTGAATGLFEIAQIDAIRVFVNVPQAYGPNVTVGLPVQVLVRGQLAQPVTGTVTRTASALDPGTRTLLTQVDIPNESHRLLPGMFVYVSFKIGPSGTRWRVPSTAVIFNAQGTRVAIVGEGDKLHFQEVTLGRDFGTAIDIQQGLQGNETIVKQPTVSLQEGQVV 392          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: A6STY2_JANMA (Membrane fusion protein n=4 Tax=Burkholderiales TaxID=80840 RepID=A6STY2_JANMA)

HSP 1 Score: 150 bits (379), Expect = 2.730e-39
Identity = 84/207 (40.58%), Postives = 124/207 (59.90%), Query Frame = 0
Query:   56 GYERVVAPFDGIITGRFVDEGALIKADTAANLTTSSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLE-NVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEIA-GVTAQDRCVDNPPEGIREGDVVETKSP 260
            GY R+VAPFDGI+T R +D G L+ +  +  +           LF +A+ + +RV + VPQS STQI+AG  + I + E+P + F GKIAR +GA+D  TRT QV + +PNP G L+PG YA   ++ +  S  +L +P+  ++   +G RVAVV    K+  Q V +  + G  IE+A GVTAQD+ + NP + +  GD V   +P
Sbjct:  205 GYSRIVAPFDGIVTRRNIDIGTLVDSGGSTRV-----------LFTLAKSDPLRVYVYVPQSYSTQIKAGNTVGITLNEIPGKVFDGKIARTAGAIDTVTRTLQVAIDLPNPDGVLLPGAYAQVAIKASGGSASSLTIPNNTLLFRPEGPRVAVVGDDGKVRLQPVVIARELGVDIELASGVTAQDKLIINPADSLSNGDAVSVITP 400          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: A0A2V6Y6C2_9BACT (Efflux RND transporter periplasmic adaptor subunit n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6Y6C2_9BACT)

HSP 1 Score: 150 bits (378), Expect = 5.510e-39
Identity = 88/204 (43.14%), Postives = 126/204 (61.76%), Query Frame = 0
Query:   53 ALQGYERVVAPFDGIITGRFVDEGALIKADTAANLTTSSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEI-AGVTAQDRCVDNPPEGIREGDVV 255
            ALQ ++++ APF GIIT R +D GALI         TS + + ++ LF IAR+E +RV + VPQ+    I  G+   I V E P + F GKIA  +GALDP +RT   EVR+ N  G L+PGMYA  +   VP+     +P+T +I  A GS+V  V     +H+ GV LG D+G S+EI +G+T ++R V +PP+G+++GD V
Sbjct:  234 ALQSFQKLEAPFAGIITARGIDRGALI---------TSGSGTGASPLFRIARVENLRVFVNVPQTFVRSIVPGQEAGILVPEYPQRPFVGKIASTAGALDPTSRTLLTEVRLRNADGALMPGMYAQVKFSLVPADALWVVPATTLIARAAGSQVITVGGDGIVHYLGVQLGRDFGQSVEIISGLTGKERLVVSPPDGLKDGDRV 428          
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Match: A0A1Q7SH39_9BACT (HlyD_D23 domain-containing protein n=3 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A1Q7SH39_9BACT)

HSP 1 Score: 147 bits (372), Expect = 1.430e-38
Identity = 86/206 (41.75%), Postives = 125/206 (60.68%), Query Frame = 0
Query:   54 LQGYERVVAPFDGIITGRFVDEGALIKADTAANLTT---SSASSTSTALFGIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGALDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTGALRLPSTAVIIDAQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEI-AGVTAQDRCVDNPPEGIREGDVV 255
            L  ++RV+APF G +  R VD GALI A +  N T    SS +  +  LF +AR++++RV + VPQ+ +  ++ G P+ IAVR    Q   GK+ R + A+DP TRT   +V IPNP+ RL+PGM+     +  PS    R+P+TAVI DAQG+RVA+V     + +Q V LG D+GTSI++ AG+   +  V  P   ++EG  V
Sbjct:  164 LTSWQRVLAPFSGAVIQRNVDVGALITAGSPVNNTAVAPSSVTGGANGLFEVARIDSLRVFVNVPQAYAPNVKVGLPVQIAVRGQLGQPVMGKVTRTASAIDPGTRTLLTQVDIPNPSHRLLPGMFVYVTFKIAPSGTHWRVPATAVIFDAQGTRVAIVGAENTLRFQEVVLGRDFGTSIDVQAGLQGHETIVKQPTVSLQEGQRV 369          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17766.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
S0EUX0_CHTCT6.740e-4345.27RND family efflux transporter, MFP subunit n=3 Tax... [more]
UPI0009F9C87C2.330e-4244.06efflux RND transporter periplasmic adaptor subunit... [more]
A0A8J3B237_9BURK2.890e-4242.86Secretion protein HlyD n=1 Tax=Oxalicibacterium so... [more]
A0A402CRZ3_9BACT1.570e-4142.93RND family efflux transporter periplasmic adaptor ... [more]
A0A2S9X1F1_9NEIS5.180e-4141.83HlyD_D23 domain-containing protein n=5 Tax=Chromob... [more]
UPI001CCC8F0A2.350e-4040.38efflux RND transporter periplasmic adaptor subunit... [more]
A0A1Q7QH32_9ACTN1.090e-3943.20Uncharacterized protein n=1 Tax=Actinobacteria bac... [more]
A6STY2_JANMA2.730e-3940.58Membrane fusion protein n=4 Tax=Burkholderiales Ta... [more]
A0A2V6Y6C2_9BACT5.510e-3943.14Efflux RND transporter periplasmic adaptor subunit... [more]
A0A1Q7SH39_9BACT1.430e-3841.75HlyD_D23 domain-containing protein n=3 Tax=unclass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.420.20coord: 183..259
e-value: 1.7E-5
score: 26.8
NoneNo IPR availableGENE3D2.40.30.170coord: 87..182
e-value: 3.2E-22
score: 80.4
NoneNo IPR availablePANTHERPTHR30469MULTIDRUG RESISTANCE PROTEIN MDTAcoord: 29..257
NoneNo IPR availablePANTHERPTHR30469:SF20RAGD PROTEINcoord: 29..257
NoneNo IPR availableSUPERFAMILY111369HlyD-like secretion proteinscoord: 22..182
IPR032317RND efflux pump, membrane fusion protein, barrel-sandwich domainPFAMPF16576HlyD_D23coord: 9..177
e-value: 3.6E-20
score: 72.1
IPR006143RND efflux pump, membrane fusion proteinTIGRFAMTIGR01730TIGR01730coord: 21..256
e-value: 1.9E-32
score: 110.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17766contigP-wetherbeei_contig17766:323..1105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17766.1.1mRNA_P-wetherbeei_contig17766.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17766 323..1105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17766.1.1 ID=prot_P-wetherbeei_contig17766.1.1|Name=mRNA_P-wetherbeei_contig17766.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
AARESVRAASADVLTALQSVQVASASARAGRMSLSASQSDGQATRASLQA
QSALQGYERVVAPFDGIITGRFVDEGALIKADTAANLTTSSASSTSTALF
GIARLEAMRVMLAVPQSSSTQIRAGEPISIAVRELPNQKFPGKIARVSGA
LDPQTRTRQVEVRIPNPTGRLIPGMYASARLENVPSTGALRLPSTAVIID
AQGSRVAVVAQGQKIHWQGVTLGTDYGTSIEIAGVTAQDRCVDNPPEGIR
EGDVVETKSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032317HlyD_D23
IPR006143RND_pump_MFP